Acidovorax carolinensis P4: CBP36_01235
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Entry
CBP36_01235 CDS
T04962
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
acip
Acidovorax carolinensis P4
Pathway
acip03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CBP36_01235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acip03400
]
CBP36_01235
Enzymes [BR:
acip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CBP36_01235
DNA repair and recombination proteins [BR:
acip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CBP36_01235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Phage_sheath_1
Motif
Other DBs
NCBI-ProteinID:
ART57665
UniProt:
A0A247D3N5
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All DBs
Position
complement(260897..261700)
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AA seq
267 aa
AA seq
DB search
MFKLTSLNLNGIRSATSKGVERWIEATRPDCICVQEVKAQAADVATRFEQLAGMQGHFHF
AQKKGYSGVGIYTRHEPSDIIAGYGSPEFDAEGRYIELRFDTPARKLSIISAYFPSGSSG
EERQLAKYRFLDAFHPHLMATKGEREFILCGDINIAHQQIDLKNWRSNQKNSGFLPEERA
WMTKLLHTTDPGGGLVDVYRQLQPTATDTAYTWWSNRGQAYANNVGWRLDYHLATPALAA
LARTEHIYKNEKFSDHAPITVDYDFTL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaagttaaccagcctcaatctcaacggcatccgatcggccaccagcaagggcgtg
gagcgctggatcgaagccacgcggccggattgtatttgtgtgcaggaagtgaaggcccag
gcggccgatgtcgccacgcggttcgaacagcttgccggcatgcaggggcattttcacttc
gcccagaaaaagggctattcgggcgtgggcatctacacgcgccatgagcctagcgacatc
atcgccggctacggttcgcccgagttcgatgccgagggccggtatatcgaactgcgtttc
gacacacccgcgcgcaagctgtccatcatcagcgcctatttccccagcggctcgtcgggc
gaggaacgccaactggccaagtaccgtttcctcgatgccttccacccgcacctcatggcc
accaagggagagcgcgagttcatcctgtgcggcgacatcaacattgcgcaccagcagatc
gacctgaagaactggcgcagcaaccagaaaaacagcggcttcctgcccgaggaacgcgcc
tggatgacaaagttgttacacacaactgaccccggcggtgggctggtggacgtttaccgt
cagttacaacctacagccaccgacaccgcctacacatggtggagcaatcgcggccaggcc
tatgccaacaacgtgggatggcgcctggactaccacctggcaacccccgcgctggcggcc
ctcgcacgcaccgagcacatctacaagaacgagaaattctcggaccacgcgcccatcacc
gtggattacgacttcacgctctga
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