Acidovorax carolinensis P4: CBP36_14360
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Entry
CBP36_14360 CDS
T04962
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
acip
Acidovorax carolinensis P4
Brite
KEGG Orthology (KO) [BR:
acip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acip03021
]
CBP36_14360
Transcription machinery [BR:
acip03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CBP36_14360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
DUF6193
Motif
Other DBs
NCBI-ProteinID:
ART59853
UniProt:
A0A240U5E4
LinkDB
All DBs
Position
complement(3099568..3100194)
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AA seq
208 aa
AA seq
DB search
MTVTPPTAPLDSDLQLVERTVAGDQRAYELLVIKYQRRIERLIGRMVRDTDLVPDIAQET
FIRAYRALHQFRGDAQFYTWLYRIAVNTAKKALMDMKRNPVISENALRGSDEEDETSRFG
HELTSEETPETILAAREIAEAVNAAMEALPDDLRQAVTLREIEGLTYEEIAAAMECPIGT
VRSRIFRAREAISARVRPLLENQSGKRW
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtaactccccccaccgcccccttagacagcgatctccaactggtggagcgcacg
gtcgcgggtgaccagcgcgcctacgagttgctggtcatcaaataccagaggcgcatcgag
cgtctgattggtcgcatggtgcgagacaccgacctcgtccccgatatcgcacaggaaacc
tttatccgcgcctaccgggcactgcaccagtttcggggcgatgcgcagttctatacctgg
ctgtaccggattgccgtgaacacggccaaaaaggcgctgatggacatgaagcgcaatccg
gtcatttccgaaaacgccctgcgcggcagtgatgaggaagatgaaacttcccgctttgga
catgaactaacttccgaagagacgcccgaaaccattcttgcagcccgtgaaattgccgaa
gccgtgaatgcggccatggaggcattgccggacgatttgcggcaggcggtgaccttgcgt
gagatcgagggattgacttacgaagagattgccgctgcgatggaatgtcccatcggtacg
gtgcggtcgcggatttttcgcgcccgcgaggcgatttcggcgcgtgtgcgcccactgttg
gaaaaccagtcgggcaagcggtggtga
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