Aminobacterium colombiense: Amico_0188
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Entry
Amico_0188 CDS
T01202
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
aco
Aminobacterium colombiense
Pathway
aco00470
D-Amino acid metabolism
aco00550
Peptidoglycan biosynthesis
aco01100
Metabolic pathways
aco01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Amico_0188
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Amico_0188
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Amico_0188
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aco01011
]
Amico_0188
Enzymes [BR:
aco01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Amico_0188
Peptidoglycan biosynthesis and degradation proteins [BR:
aco01011
]
Precursor biosynthesis
Amino acid ligase
Amico_0188
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_3
PRD_Mga
TTL
Motif
Other DBs
NCBI-ProteinID:
ADE56335
UniProt:
D5ECQ3
LinkDB
All DBs
Position
complement(192193..193296)
Genome browser
AA seq
367 aa
AA seq
DB search
MERRHEEERENPLPLKKRKKEVQVIGITYNLRKDAQADEPDDIYEEYDCLETVEALSNEI
ASLGFQVFLFEQNELLLQKLDSIAPDFVLNIAEGLGNYRGRESQVPCILESLNIPFSGSD
SASLAIALDKVLTSHVLRASNIPAPKNYVAKLPQDTTEKKVIFNTCQKYIIKPRWEGSSK
GIFLDSIADTPEKVKTCIKRIWERYNQPAIVEEFLPGIEITAGVAGNTQPKCIGMMSITP
VTENSSFLYSLEEKRNYLERIRYSGPDSMSPQLRKKIGDLAVRAFKALELRDIARIDFRL
DDKGQPRVIDINPLPGLSPAYSDLPILYRLSGGEYSELIQTILREAFSRYGLCAPCLNKP
ELVREKA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtcgccatgaggaggaacgagaaaatcctttaccgctgaagaagcggaaaaaa
gaagttcaagttataggcattacctataatttgcgaaaagatgctcaggccgatgagcct
gacgatatatatgaagaatacgattgcctggaaacagtagaagcattgtccaacgaaatc
gcttctcttggttttcaggttttcttgtttgaacagaatgagctccttctacagaaactc
gactctattgctcctgattttgtgctgaatatagcggaaggtcttggaaactacaggggg
agagaatcccaggtcccctgtattcttgaaagcctcaacatcccttttagcggctcagac
tctgcgtcccttgccatagctctggacaaggttcttacgtcccatgtccttcgggcttca
aatattcctgcacccaaaaactatgtcgccaaactgccacaagatacgacagaaaagaaa
gttatttttaacacctgtcaaaaatatatcattaagcctcgctgggaagggtcatcaaag
ggaatttttcttgattccattgcggatacaccagagaaagtaaagacgtgtatcaagcgg
atatgggaacgttacaaccaaccagcaattgtagaggaatttttgcctgggatagaaata
acagcaggtgtcgctggcaacactcagcccaaatgcattggcatgatgtctattacacca
gtaactgaaaatagctcttttttgtactcccttgaagagaaaagaaactatctggaacgg
attcgatactctgggcctgattcaatgagccctcaactcagaaaaaagatcggggatctt
gctgtccgcgctttcaaggccctcgaacttcgtgatatagcacggatcgatttccgtctc
gatgacaaggggcaaccccgggttatagacatcaaccccctgcctgggctgtctcccgca
tatagcgatcttccgatcctttatcggctcagcggaggggaatattcggaactcattcaa
accatccttcgcgaggccttctcaagatatggtttgtgtgctccttgcctcaacaaacca
gaactggtaagggagaaggcttga
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