Aminobacterium colombiense: Amico_1389
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Entry
Amico_1389 CDS
T01202
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
aco
Aminobacterium colombiense
Pathway
aco00470
D-Amino acid metabolism
aco01100
Metabolic pathways
aco01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Amico_1389
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Amico_1389
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aco01011
]
Amico_1389
Enzymes [BR:
aco01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Amico_1389
Peptidoglycan biosynthesis and degradation proteins [BR:
aco01011
]
Precursor biosynthesis
Racemase
Amico_1389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
ADE57506
UniProt:
D5EG24
LinkDB
All DBs
Position
complement(1418892..1420010)
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AA seq
372 aa
AA seq
DB search
MFLRPTRMEVNLANIQSNFKTIRRHVGAGPQIMAVVKADAYGHGAVEVAKSLIEAGCQRF
AVATPDEAVVLREAGINDPILVLGPSPYDAASAYVKHDISAALTDLVFAQMMSREAVNQG
KTALLHLKIDTGMGRIGFLPEQIPGIIDDILKLPGIKIEGLFTHFATADEKRLDYTNQQF
ARYMKVYHFLESKGVRVPLRHVCNSAAVLNSPEKHLDAVRPGIILYGMYPSSECIRPIEL
KPTFEVKTAIAAVKEISSNSGVGYGLRYMSRGTEKIAVLPIGYGDGFSRCLSMKVPVLVH
GKRVSLVGNICMDQTMIDVTDIEDVKVGDEVVIVGRQGEEAITPEEIAPARGTINYEIPI
MFSKRVPRVYIR
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgtttcttcgcccaacgaggatggaggtcaatctagctaacattcagtctaatttcaag
acgatccgccggcatgtgggagctggcccccagatcatggcagtagtgaaagcggatgcc
tatggtcacggagctgtagaagtggcaaaatctcttatcgaggcgggctgtcagcgtttt
gcagtagctacacctgatgaagcggtagtgttgagagaagcggggataaatgaccctatt
ttggttctgggcccctctccttacgacgcggcatcagcctatgttaaacacgatatttca
gcagcccttacagatttggttttcgcacaaatgatgagccgtgaagcggtgaatcagggt
aaaactgccttgcttcatctgaagatcgatacggggatggggagaatagggtttttgcca
gaacagattccaggcatcattgatgatattttaaaattgcccggcataaagatagaaggg
ctcttcactcattttgcaacggcagatgagaaacgtctcgattatacaaatcaacagttt
gcccgttatatgaaggtctatcattttctggaaagcaagggggtaagagttcctttgcgc
catgtgtgcaatagcgcagccgtgttgaattctccagaaaaacatcttgatgccgttaga
ccgggaattattctctatggcatgtacccttcaagcgagtgtatcaggcccatagagctt
aaacccacttttgaagttaaaacggccattgcagccgttaaagaaatttcttctaatagc
ggtgtgggctatggacttcgatatatgtctcggggaacagaaaaaatagctgttttacca
atagggtacggcgatggtttctctcgatgcctttctatgaaagttccagttcttgttcac
ggtaaaagagtttccttggttggaaatatctgtatggatcagacaatgatcgatgttact
gacatagaagatgtgaaagttggcgatgaggtggtaattgttggccggcagggggaggaa
gccattacaccggaagaaatagccccggcgcgaggtaccataaactatgaaattcccata
atgttctcaaagagggtccccagggtctacattcgctga
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