Anolis carolinensis (green anole): 100562383
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Entry
100562383 CDS
T01608
Symbol
dhx38
Name
(RefSeq) DEAH-box helicase 38
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100562383 (dhx38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acs03041
]
100562383 (dhx38)
Enzymes [BR:
acs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100562383 (dhx38)
Spliceosome [BR:
acs03041
]
Complex C
Other components
Step II factors
100562383 (dhx38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
PhoH
Flavi_DEAD
AAA_30
Microtub_bd
SRP54
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
100562383
NCBI-ProteinID:
XP_016852888
Ensembl:
ENSACAG00000008115
LinkDB
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Position
Un
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AA seq
1261 aa
AA seq
DB search
MGEAEAASEASLHRLEGLSPGAQEGGLVVPAARRRSAAEEQHVFKVPAPRASLLGLDLLA
AQKRREKEEQAANAAKRARLAPDADWAAEPQQEQRGDGEAEPAEEEEEERDGGGGDGGGA
GRGSRRERHYRSARVETPSHTGGVSEEFWERSRQRERERREQGVFASSKEEKERKRDHGR
ERDHDRKRDREDRDRSRRSSSGGHSEREGSSERSGGRRNEPESPRHRPKDAATPSRSSWE
EEDSGYSSSRRSQWESPSPTPSHRDSDRSHRGSASRDSERRDRDRSLRSRYPEETPLPTP
SYKYNDWADNQRHLGASAPWLSRGRGKREDGEDGIAFDTEEERQQWEEDQRQADRDWYMM
DEGYDEFHNPLASSSEEYVRKREQHLQKQRQKRISAQRRQINEDNERWETNRMLTSGVVH
RLEVDEDFEEDNAAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQ
LVRKHREQKERKKAQHKHWELAGTKLGNIMGIKKDEEEEGAKQILAEDGSVDYRTEQKFA
DHMKEKSEASSEFAKKKSIAEQRQYLPIFAVQQELLTVIRDNSIVIVVGETGSGKTTQLT
QYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGVSLGEEVGYAIRFEDCTSENTVIK
YMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSAT
MDAEKFAAFFGNVPIFHIPGRTFPVDVLFSKTPQEDYVEAAVKQALQVHLSSAPGDILIF
MPGQEDIEVTSEQIVEHLEELANAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATN
IAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCF
RLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQ
LWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYR
PKGREEESDQVREKFAVPESDHLTYLNVYLQWKSNSYSTLWCSEHFIHAKAMRKVREVRA
QLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSS
LFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQESRRRAK
EEASAMEEEMALAEEQLRARREEQERRNPVSSVRSTKIYTPGRKEQGQPATPRHTPARFG
L
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggcggaggcggcgtcggaggcgtcgctgcaccggctggagggcctgtccccg
ggggcgcaggaagggggcctggtggtgccggcggcgaggcggaggagcgcggccgaggag
cagcacgtcttcaaggtcccggccccgagggcctcgctgctaggcctcgacctcctggcc
gcccagaagcgccgcgagaaggaggagcaggccgccaacgccgccaagcgggcccggctc
gcccccgacgccgactgggccgcggagccccagcaggagcagcgcggagacggagaggcc
gagccggcggaggaggaggaggaggagcgggacggaggcggaggagacggcggcggcgcg
gggcgagggtcccggagggagcggcattaccgttctgcacgggttgagacgccatcacac
acgggtggcgtcagtgaggagttctgggagcgcagccgtcagcgggaacgagagcggagg
gagcagggggtcttcgcttcctccaaggaggagaaggagcgcaagagggaccacggccgc
gagcgggaccacgaccggaagcgagaccgagaagatcgggaccggagtcgacgcagcagc
agcgggggccactcagagcgggagggctcctcggagcggagtggcggtcggaggaatgag
ccagaaagccctcgccaccggcccaaagatgcggcgactccttcgcgctccagctgggag
gaggaggacagcggctacagcagttcgcgccggtcgcagtgggagtccccctcgcccacc
ccttcccaccgggactccgaccgcagccaccggggctctgcctctcgtgacagcgaacgg
agggaccgcgaccggtccttgcggagccgctacccggaggagaccccgctgcccacccct
tcgtataagtacaatgactgggccgacaaccagaggcacctaggggcctccgccccatgg
ctttctagaggcagagggaaacgtgaagatggggaagacggcattgcctttgatactgag
gaggagcggcagcagtgggaagaggaccagcggcaagcagacagggactggtacatgatg
gacgaaggatatgacgaattccacaaccctttggcctcttcctcggaggagtatgtcagg
aagcgggagcagcacctgcagaagcagaggcagaagcgcatctctgctcagcgcaggcag
atcaacgaggacaatgagcgctgggagacgaaccgcatgctaaccagtggcgtggtgcac
cggctggaggtggatgaggactttgaggaggacaacgccgccaaggttcacctcttggtc
cacaacctggtgccccccttcctggacgggcgcattgtgttcaccaagcagcccgagcct
gtgatccccgttaaggacgccacgtcagacctggccattatcgcccggaaagggagtcag
ttggtgcggaaacaccgggagcagaaagagcgcaagaaggcccagcacaagcactgggag
ctggcgggcaccaaactgggcaacatcatgggcatcaagaaggacgaggaggaggaaggg
gccaagcagatcctggcagaggatggcagcgtggattacaggacggagcagaagtttgct
gaccacatgaaagagaagagcgaagccagcagtgagtttgccaagaagaaatcaattgca
gagcagaggcagtacctgcccatctttgctgtccagcaggagctgctgacagtcatccga
gacaacagcatcgtgatcgtggtgggggagacgggcagcgggaagaccacacagctgacg
cagtacctgcacgaggacggatacacggactatggcatgattggctgcacacagccgcga
cgagtggcggcaatgtcagtggccaagcgtgtcagtgaggagatgggcgtgagcctcggg
gaagaggtgggctacgccatccgctttgaggattgcacctccgagaacacggtcatcaag
tacatgacggacgggatcctgctgcgggagtctctgcgagaggctgacctcgaccactac
agcgccatcatcatggacgaggcccacgagcgctccctcaacaccgacgtgctcttcggt
cttctgcgtgaggtggtagcccggcgctccgacctgaagctgattgtgacttcggccacc
atggatgcagagaagtttgccgccttctttgggaacgtgcccatcttccacatcccgggc
cgcaccttcccggtggacgtcctcttcagtaagacgccacaggaggactatgtggaggct
gcggtcaagcaggccctgcaggtacacctctccagcgccccaggggacattctcatcttc
atgccaggccaggaggacattgaggttacctctgagcagatcgtggagcacctggaggag
ctggccaatgctcccgctctggccgtgctgcccatttactcccagctgccctccgacttg
caggccaagatcttccagaaggcacccgacggagtccggaagtgcatcgtggccacgaac
attgccgagacctctctgacggtggatgggatcatgtttgtgatcgactcaggctactgc
aagctgaaggtcttcaacccacggatcggcatggacgctctccagatctaccccatcagc
caggccaacgccaaccagcgctccggccgtgctgggaggacggggccaggccagtgtttt
agactctacacacagagcgcctataagaatgagctgctgaccaccacggtcccagagatc
cagcggacgaacctggccaacgtggtgctgctgctaaaatccctgggagtccaggacctg
ctccagttccacttcatggacccccctccggaggacaacatgctcaactccatgtaccag
ttgtggatcctgggtgcgctggacaacacaggaggactgacctccacggggcgcctgatg
gtggagttccccctggacccagccctctcgaagatgctcatcgtctcctgcgacatggga
tgcagctcagagatcctgctgattgtctccatgctctctgtgccagctatcttctaccgg
ccaaagggccgggaggaagagagcgaccaagtgcgggagaagtttgccgtcccggagagc
gaccacctgacctacctgaacgtctacctgcagtggaagagcaacagctactccacgctc
tggtgtagtgagcacttcatccacgccaaggccatgcgcaaggtgcgtgaggtgcgggca
cagctgaaggacatcatggtgcagcagcgcatgagcctggcctcctgtggcaccgactgg
gacatcgtccgcaagtgtatctgcgcggcttacttccaccaggctgccaaactgaagggc
atcggggaatacgtcaacattcgcaccgggatgccctgccacctgcaccccaccagctcc
ctgtttggcatgggctatacgccggactacattgtctaccatgaacttgtgatgactacc
aaggagtatatgcagtgcgtcactgctgtggatggcgagtggctggccgaactggggccc
atgttctacagcatcaaacatgccggcaagtcacgccaggagagtcgccggagggccaag
gaggaggcatccgccatggaggaggagatggcgctggcggaggagcagctgcgtgcccgg
cgggaagagcaggagcgacgcaaccccgtcagcagtgtcaggtccaccaagatctacact
ccggggcgcaaggaacagggtcagccagccaccccacgccacacgccggcccgcttcggc
ctctag
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integrated database retrieval system
