Anolis carolinensis (green anole): 100562618
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Entry
100562618 CDS
T01608
Symbol
prpf38a
Name
(RefSeq) pre-mRNA processing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100562618 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acs03041
]
100562618 (prpf38a)
Spliceosome [BR:
acs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100562618 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
100562618 (prpf38a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
100562618
NCBI-ProteinID:
XP_003220356
Ensembl:
ENSACAG00000008249
LinkDB
All DBs
Position
4:114575497..114580626
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AA seq
312 aa
AA seq
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MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRYTGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDQLLHDERMCDIILPRLQKRYVLEEAEQLETR
ISALEEDMDDVESSEDEEEEDEKLERAPSPDHRRRGYRDLDKPRRSPTMRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccggaccgtgaaggacgcgcacagcatccacggcacgaacccgcaatacctg
gtggagaagattatccgcacccgcatctacgagtccaagtactggaaggaagagtgcttc
ggcctcacagctgaactggttgtagacaaagctatggagctgcgatacactggtggagtt
tatggtggaaacatcaagcccacaccattcttgtgtttgactttgaaaatgctgcagata
cagcctgaaaaggatataattgttgaatttataaaaaatgaagatttcaagtacgtgagg
ttgctgggagcattgtatatgagactaactggcactgctatagactgctacaaatacctt
gaacccctgtacaatgattatcgaaaaataaaaagccaaaatagaaatggagagtttgag
ctaatgcacgttgatgagtttattgatcaactgcttcatgatgagcgcatgtgtgatatc
attttacctagactacagaaacgatacgtcctagaagaagctgaacaactggaaacacgc
attagtgctttggaagaggatatggatgatgtggagtctagtgaagatgaggaagaggag
gatgaaaagctggagagagctccctcacctgatcacaggcgaagaggctacagagatcta
gacaagccccgcagatctccaactatgcgttataggagaagccgaagtagatctcctaga
aggcgaagccgttctcccaagaggagaagtccgtcaccacgccgagaaagacatcgcagc
aagagcccaagacggcatagaagtagatccagagaaagacgccacagatcaagatctaaa
tcaccagggcatcaccgtagccacagacatcgcagccattccaagtccccagaaagatct
aagaagagtcataaaaagagtcgtcgaggaaatgagtaa
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integrated database retrieval system
