KEGG   Anolis carolinensis (green anole): 100565521Help
Entry
100565521         CDS       T01608                                 

Gene name
lig1
Definition
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
acs  Anolis carolinensis (green anole)
Pathway
acs03030  DNA replication
acs03410  Base excision repair
acs03420  Nucleotide excision repair
acs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acs00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    100565521 (lig1)
   03410 Base excision repair
    100565521 (lig1)
   03420 Nucleotide excision repair
    100565521 (lig1)
   03430 Mismatch repair
    100565521 (lig1)
Enzymes [BR:acs01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     100565521 (lig1)
    6.5.1.6  DNA ligase (ATP or NAD+)
     100565521 (lig1)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     100565521 (lig1)
DNA replication proteins [BR:acs03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    100565521 (lig1)
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     100565521 (lig1)
DNA repair and recombination proteins [BR:acs03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     100565521 (lig1)
   NER (nucleotide excision repair)
    Other NER factors
     100565521 (lig1)
   MMR (mismatch exicision repair)
    Other MMR factors
     100565521 (lig1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-GeneID: 100565521
NCBI-ProteinID: XP_003224638
Ensembl: ENSACAG00000011085
UniProt: H9GHC9
LinkDB All DBs
Position
Un
AA seq 913 aa AA seqDB search
MQSTIRSFFQPLTQAKPGKGVAENSEEETTPKKKPVNSEKPVNGTALCANIPENSSAKKD
EDNSVKSEGGKDTKSGESKQESICLPEQSKPVENNSPSTSPAASNSPSPSSIPRRKTARK
QVPKRKLEDEVNSYNNSQEVLSAKRQKGDDDGDGSHGESDAKPMQVKEVKDKKEEDSELV
EREEETEAEEKKMLTSSKLSNKAISSFFAPRKTSVKADKKQTPGSEENVPPAKSHNEGKN
HESNSVAKDSPKASPTLEPSEYNSAKSNYHPIHDACWGSGQRVPYLAVARTFEWIEQESA
RLKIIETLSNFFRSVIALSPEDLLPCVYLCLNRLGPAYEGLELGIGKTILMKALAQATGR
QLDQIKAEAAEKGDLGLVAESSRTTQGTMFAPPKLGAGAVFGKLQAIGRMMGSSSMNKKI
DIIKSLFVACRHSEARYIARSLEGKLRIGLAEQSVLSALAQAASLTPPGQKFPPEILDAS
KGKSAETRKSWLDERALIVKQAFCELPNYDIIVPVLLEHGVESLPKHCKITPGIPLKPML
AHPTKGIGEVLKRFEEAAFTCEYKYDGERAQIHILENGEVHIYSRNQENNTTKYPDIVSR
IPKVKKSTVESCILDAEAVAWDPDSKQIQPFQVLTTRKRKDVDTEDIRVQVCVYAFDMLY
LNGQSLVREPLTQRRTLLRDSFTEVEGQFLFATSMDTSNTDEIAEFLERSIKDSCEGLMV
KTLEVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGKGKRAGIYGGFLLACYD
DESEEFQSICKIGTGFTDEDLEKLHTSLKAHVIPQPRPYYRWGGTAEPDHWLETHHVWEV
KCADLSISPVHRAAAGLVDEEKGISLRFPRFLRLRDDKKPEEATTSAQVAELYRKQQQIQ
NQQSVENGNDDFY
NT seq 2742 nt NT seq  +upstreamnt  +downstreamnt
atgcagagcacaataagatcgttcttccagccactaacacaggcaaagcctggaaaagga
gtagcagaaaacagtgaagaagaaaccactcccaaaaagaaaccagtaaactctgaaaag
ccagtaaatggtacagcactctgtgcaaacatcccagagaattcatcagccaaaaaagat
gaagacaattctgtgaaatcagaggggggaaaagatacaaagtctggtgagagcaagcag
gaatctatctgtcttcctgagcaaagtaaacctgttgagaacaactccccaagtaccagc
ccagctgcatctaattcaccctcaccttctagcatcccacgacgcaagactgctcgcaag
caggtccctaaacgtaaattagaggacgaagtcaacagctataataattctcaggaggtt
cttagtgccaagaggcagaaaggagatgatgatggagatggttcacatggagagtcagat
gcaaaacccatgcaagtgaaagaagtgaaagacaagaaagaagaggattcagaattggta
gagcgtgaagaagagacagaagcagaagaaaagaagatgcttacatcctctaagctatcc
aacaaggccatctctagcttttttgcccccaggaaaacctctgtgaaagcagacaaaaag
cagacacctggctcagaagaaaatgtgcctccagcaaagagtcataatgaaggcaaaaac
catgagtcaaatagtgtggctaaagattctccaaaggcctctcccacacttgagccttca
gagtacaactcggcaaagagcaactatcatcctatccatgatgcttgttggggttctggt
cagagagtaccatacctggctgtggctcgtacctttgagtggattgaacaggaatctgcc
cggttgaaaattatagagactttgagcaatttttttcgctctgtgattgccctatctcct
gaagacctgctgccctgtgtctatctttgtctgaatcggctaggcccagcatacgagggt
ttagaactgggtattggcaaaaccatcctcatgaaagctttggctcaggccacaggtcgg
cagctggatcagatcaaggcagaggcagctgagaaaggagatctgggattagttgctgaa
agcagccgcaccacacaaggcaccatgtttgccccaccgaagcttggtgcgggtgcagtc
tttggcaaactgcaagcaattgggcgcatgatgggaagctcttccatgaacaagaaaatc
gacataatcaagtccttgtttgttgcttgtcgccactcagaggctcgctacattgctcga
tcactggaagggaagctgcggattggattagcagaacaatctgtcctatcagctctggcc
caggcagcatcactcactcctccagggcaaaaattccccccagaaattctggatgcttca
aaaggcaaatctgcagagacccgcaaatcctggctagatgagagagccttgattgttaag
caagccttctgtgaactgccaaattatgacatcattgtgcctgtcctcctagagcatggt
gtggagagcctgcctaagcactgcaaaatcacaccaggaatccccttaaagcccatgctg
gctcacccgacaaaaggaattggagaagtattaaagcgttttgaagaagccgcttttacc
tgtgaatataaatatgatggggagcgagcacagatccacatcctggagaatggagaagtg
catatctacagccggaaccaagagaacaacacaaccaaataccctgacattgtgagccgt
atccccaaggtaaaaaagagcactgtagagtcgtgtatcttggatgcagaagctgtggcc
tgggatccggattccaaacagatccagccattccaagtactgactactcggaagcgtaaa
gatgtagatactgaagatatccgagtgcaggtctgcgtatatgcatttgacatgctctac
ctcaatgggcagtctctggtccgggaacccttaacccagcgccgaaccctactacgggat
tccttcactgaggttgaaggtcagttcctctttgccacctccatggacacaagtaataca
gatgagatagcagagttcctggaacgctccatcaaagactcttgtgaggggctaatggta
aaaacattggaagtggatgccacatatgaaattgcaaagagatcccacaactggctgaag
ctgaaaaaagattatctggatggtgtgggggacactctggacctggtggtgattggtgcc
tacttggggaagggaaagcgtgcaggcatctatggcggcttcctcctggcttgttatgat
gatgaaagcgaggagttccagagcatctgcaagattggcactggatttacggatgaggac
ctcgagaaacttcatacctctcttaaggcccatgtcattccacagccacggccatattac
cgctggggtggcacagcagagcctgaccactggctggagacacatcatgtctgggaagtg
aagtgtgctgacctgtcaatttctcccgtccacagagcagcagctggactggtggatgaa
gaaaagggcatctccctgcgcttccccagattcctacgcctccgagatgataagaaacca
gaggaagccactaccagcgctcaggtggctgagctataccggaaacagcaacagatccag
aatcagcagtcagtggaaaatggaaatgatgatttctactag

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