Aspergillus clavatus: ACLA_015070
Help
Entry
ACLA_015070 CDS
T01148
Name
(RefSeq) DNA ligase, putative
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
act
Aspergillus clavatus
Pathway
act03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ACLA_015070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
act03400
]
ACLA_015070
Enzymes [BR:
act01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
ACLA_015070
DNA repair and recombination proteins [BR:
act03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
ACLA_015070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
RNA_ligase
BRCT
LIG3_BRCT
RTT107_BRCT_5
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
4706930
NCBI-ProteinID:
XP_001274495
UniProt:
A1CBF1
LinkDB
All DBs
AA seq
1029 aa
AA seq
DB search
MNSDDIGPDEGHPRAPVENEESDLDEKYPNRPRNHSSTLPFHELFQTLFNPLSEIKKKPA
GAVAARRKVGPHGQSAANLNPLERRRDVIERFISRWRKEVGDDIYPAFRLILPDKDRDRA
MYGIKEKAIGKMLVKIMKIDKNSEDGFNLLNWKLPGQAAATRMAGDFAGRCYDVLSKRPM
RTDVGDMSIEEVNEKLDNLSAASKEEQQLPILAEFYRRMNPEELMWLIRIILRQMKVGAT
ERTFFDVWHPDAENLYSISSSLRRVCWELHDPNIRLDAEDRGISLMQCFQPQLAQFQMQS
LDKMVSRMRPTEDDPVFWIEEKLDGERMQLHMESDDSVPGGRRFRFWSRKAKEYTYLYGN
GIYDENGSLTRHLKDAFADGVDSLILDGEMITWDPEQDAPAPFGTLKTAALAEQRNPFST
TGARPLFRVFDILYLNGRDLTGYTLRDRRNALQKSVRPVHRRFEIHPYEEATTKDEVEVA
LRKVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYFGSGRRG
GNLSSFLCGLRADDTHASQGSNASKCYSFCKVGGGFNAADYANIRHHTDGKWVEWNPKKP
PTAYIELAGKDAQYERPDMWIKPEDSVVVCVKAASVSVSDQFRIGLTLRFPRFKRLRMDK
DWRSALSVQGFLDLKSNVEQEHREKEFSVDNFRRKRIKRTTKKPLAVAGYDADEEAKYAG
PSGHIFEGLNFYILTDANAPVKKSKQELEQLVKANGGKFYQTNNAAPHTVCIADRRTVKA
ASLQKSGNVDIIRPSWLLDCVKQNEIDAGLPDLLLPMEPKHMFFARPEKQEEVAANVDQF
NDSYARNTTSEELKNVLFLPNWWLRKTSADCFKTLHQMMKEHRFKGSQCPEGIAKLTERI
QERVHSGYEIPCGWLFKGLTILFQHRSMDDTGSSGNTVPSDHSYRLRLAINTARFAGANI
ASSPNQASITHVVVDPESPSSEISSLRGTWSKKQGQKVPHIVAVDWIEESWKERTLLDEE
RFQPKRSKA
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgatgatatcggtcccgatgaagggcatccgcgcgctcccgtcgagaatgag
gaatcagaccttgatgaaaaataccctaatcgcccgcgtaatcattcctcaacgctgccc
ttccacgaactcttccagacccttttcaatccgctgagcgagatcaaaaaaaagcccgcg
ggggctgtcgcggctcgtaggaaagtcgggccccatggacagtcggcagcgaacctcaat
cctctggaaagacgacgcgatgtcattgagcgcttcatatcacggtggaggaaggaggtc
ggcgacgacatataccccgccttccgactgattctcccggacaaggaccgggaccgggcc
atgtacgggatcaaagaaaaagcgataggaaagatgcttgtgaagatcatgaagattgac
aagaactccgaggacggctttaatcttttgaactggaagctaccggggcaagcagccgcg
acgcggatggctggagacttcgctggccgatgctacgatgttctctcgaagcggccgatg
cggacagacgtgggtgacatgtcgattgaggaggtgaacgagaagctcgacaacttgtca
gcggcttccaaggaggagcagcagttaccaatccttgcggagttttaccggcgcatgaac
ccggaggagcttatgtggttgattcgaatcatcttgcggcaaatgaaggtgggggcgacg
gagcggaccttcttcgatgtctggcatccggatgccgagaacctgtacagcatctcgagt
agccttcggcgcgtctgttgggagttgcatgaccctaatattcgactcgatgctgaggac
agagggatctcattgatgcagtgttttcagccgcagttggcccagtttcagatgcaatcc
ttggataaaatggtcagtaggatgagaccgacggaggatgatcccgtattctggattgag
gaaaaattggatggtgagcgcatgcagctccatatggagtcggacgactcggtccctggc
gggagacgattccgattctggtcaaggaaggcgaaggaatacacgtatctttatgggaac
ggcatctacgatgaaaatgggtcactcacgagacatctcaaggacgcatttgcagacgga
gttgacagcttgatattggatggcgagatgatcacatgggaccctgagcaagatgctccc
gcgcctttcggtacgctcaagactgctgctttagctgaacagagaaaccccttttcgacc
acaggtgcccgaccactcttccgtgttttcgatatcctctatctcaacggaagagatctg
accggatacactcttcgtgatcgtcgcaatgcgttgcaaaaaagtgtgcgccccgtccac
cgtaggttcgaaatacatccttacgaggaagccacgacgaaagatgaagtcgaagttgct
ctcagaaaggtggttgcagaagcttccgaggggttggtgctcaaaaatcctaggtcaccg
tatcgtttgaacgaaagacacgacgattggatgaaggtaaagccagagtacatgactgag
tttggagagtcgctggatctcattgtcatcggcgggtactttggctctggtcgtcggggc
ggcaacttgtcaagcttcctctgtggattaagggccgatgacacccatgcttcgcagggc
tcgaatgcatccaagtgctattcattctgcaaagtcggaggtggcttcaatgctgctgat
tatgcgaacatccgtcatcacacggatggcaaatgggtagagtggaatccgaagaaacct
cccaccgcttacattgaactcgccggcaaagatgcgcaatatgagcgacccgacatgtgg
attaagccagaagactcggtcgtcgtctgcgtcaaggcagcatccgtctctgtcagtgat
cagttccgtatcggcctgacattgagattcccgcgattcaaaagactacgcatggataaa
gattggagaagtgctctctctgtacagggattccttgacctcaaatcaaacgtggaacag
gagcatcgcgagaaggagtttagcgtggacaattttcgtcgcaaacgcataaagagaacg
acgaagaaacctctggctgttgctggttacgatgcagacgaagaggccaagtatgcggga
ccgtccggtcatatattcgaggggttgaacttctacatactcactgatgccaatgcgcct
gtgaagaagtcgaagcaggagctggagcaactggtcaaggcaaatggaggcaaattctac
caaactaacaatgcagctcctcacacagtttgtatagccgacagaagaacggtcaaggct
gcctcactgcagaaaagtggtaatgtggatatcatcaggccatcctggttgctcgattgt
gtgaaacaaaatgaaattgatgcaggccttcctgatctgctcctgccgatggagccaaag
cacatgttcttcgccagacccgagaagcaagaggaagtagccgctaatgttgaccaattc
aacgacagctacgctcgtaataccacgagcgaagagctcaaaaatgtattatttctccca
aactggtggctgagaaagacaagtgctgactgcttcaagacactgcaccaaatgatgaaa
gagcatcggtttaaaggttctcagtgtcccgaaggcatcgcgaagctcaccgagcgcatt
caggaaagagtccattccggatacgaaataccgtgtgggtggctctttaagggcttgacc
atcctcttccagcatcgaagcatggatgatacaggatccagcggtaatacggtcccatca
gaccacagttaccggcttcgcttggctatcaacacagcacgctttgccggggcaaacatc
gccagttccccaaaccaagcctcgattactcacgtcgtcgtcgacccggaaagcccatcc
tcagaaatatcttcgttacgaggcacatggtccaagaaacaagggcaaaaagtcccgcat
atagtcgctgtcgactggattgaagagagctggaaggaacgcacgttactggacgaagag
agattccagcctaagcgatccaaggcttga
DBGET
integrated database retrieval system
