Actinoalloteichus sp. AHMU CJ021: C1701_17595
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Entry
C1701_17595 CDS
T05306
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
acta
Actinoalloteichus sp. AHMU CJ021
Pathway
acta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1701_17595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acta03021
]
C1701_17595
03019 Messenger RNA biogenesis [BR:
acta03019
]
C1701_17595
Transcription machinery [BR:
acta03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
C1701_17595
Messenger RNA biogenesis [BR:
acta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C1701_17595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
NACHT
AAA_22
PIP5K
Motif
Other DBs
NCBI-ProteinID:
AUS79840
LinkDB
All DBs
Position
4162044..4163774
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AA seq
576 aa
AA seq
DB search
MVMAELRQLAGELGITSTTGMRKGDLIAAIKERQGGGSAKTDTAAQLPFGSGDQGKTEQT
SADAPAQPAPSRRSRGASASESASSGEGEEDGGRRGRRRRTSSRAASATDGGGGDDRGGE
RQERGERQDRGERQDRGERQDRGDRQDRASRNDRQNDGRDDDDEDGGGRRRGRRFRDRRR
GRGRAEGGGNEPEVREDDVLLPVAGILDVLENYAFVRTSGYLAGPNDVYVSLSLVRKYGL
RRGDAITGVVRQPREGEQQRQKFNPMVRVDSINGLAPDAARGRPEFTKMTPLYPNERLRL
ETESHALTGRVIDLVMPVGKGQRALIVSPPKAGKTMVLQAIANAITTNNPECYLMVVLVD
ERPEEVTDMQRSVKGEVIASTFDRPPSDHTTVSELAIERAKRLVELGYDVVVLLDSITRL
GRAYNLAAPASGRILSGGVDSTALYPPKRFLGAARNIENGGSLTIFATALVETGSAGDTV
IFEEFKGTGNAELKLDRKIADKRTFPAVDVDASSTRKEELLLSPDELAVTHKLRRVLSAL
DDQQALDLLLERLRKTRTNIEFLMQVAKNTPGGNGD
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggcggagcttcgccagctcgccggggaactcggcatcaccagcaccactgga
atgcgtaagggtgatctcatcgccgcgatcaaggagcggcagggcggtggttccgccaag
accgacaccgctgcgcagctgccgttcgggtccggggaccagggcaagaccgagcagacc
tccgcggacgcgccggcgcagccggctcccagccgccgctccaggggcgccagtgcgtcc
gagagcgcgtcgtccggtgagggtgaggaggacggtggccgtcgcggccgtcgtcgccgc
acctcgagccgggccgccagcgccaccgacggtggcggcggcgatgaccggggcggcgag
cgccaggagcgtggtgagcgtcaggaccgtggtgagcgtcaggaccgtggcgagcgtcag
gaccgcggcgaccgccaggaccgcgcgtcgcgcaacgaccgccagaacgacggtcgggac
gatgacgacgaggacggcggcggccggcggcggggacgcaggttccgggatcgtcgccgg
ggccgtggccgcgccgagggtggcgggaacgagccggaggtgcgggaggacgacgtcctc
ctgcccgtggccggcatcctggacgtgctggagaactacgcgttcgtccgcacttcgggg
tacctcgccggcccgaacgacgtctacgtgtccctgtcgttggtccgcaagtacgggctc
cggcggggcgacgcgatcaccggtgtggtccgccagccgcgtgagggcgagcagcagcgc
cagaagttcaacccgatggtgcgggtcgactccatcaacggcctcgcgccggacgccgct
cggggacgcccggagttcaccaagatgactccgctgtacccgaacgagcggctgcggttg
gagaccgagtcgcacgccctgaccggccgggtcatcgacctggtcatgccggtgggcaag
ggccagcgggccctgatcgtctcgccgcccaaggccggcaagacgatggtgctccaggcc
atcgccaacgccatcacgaccaacaaccccgagtgctacctgatggtcgtgctggtcgac
gagcggcccgaggaagtcaccgacatgcagcgctcggtgaagggcgaggtcatcgcctcg
accttcgaccggccgccgtccgaccacacgacggtgtcggagctcgccatcgagcgggcg
aagcggctggtggagctgggttacgacgtggtcgtgctcctcgactccatcacccggctc
ggccgggcctacaacctggcggcgccggcctcgggtcggatcctctccggtggtgtggac
tcgacggcgctgtacccgccgaagcggttcctgggcgcggcccgcaacatcgagaacggt
ggttcactgaccatcttcgcgacggcgctggtcgagacgggatccgctggcgacacggtg
atcttcgaggagttcaagggcaccggcaacgcggagctgaagctcgaccgcaagatcgcg
gacaagcggacgttcccggcggtcgacgtcgacgcctcgagcacccgcaaggaggagctc
ctgctctccccggacgagctcgccgtcacgcacaagctgcggcgtgttctctccgcgctg
gatgatcagcaggcgctcgacctgctgctcgagcggctgcggaagacccggacgaacatc
gagttcctgatgcaggtggcgaagaacacgcctggcgggaacggggactga
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