Athene cunicularia (burrowing owl): 113482067
Help
Entry
113482067 CDS
T05777
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113482067 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acun03041
]
113482067 (SF3B1)
03036 Chromosome and associated proteins [BR:
acun03036
]
113482067 (SF3B1)
Spliceosome [BR:
acun03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
113482067 (SF3B1)
Complex B
113482067 (SF3B1)
Complex C
U2 SnRNP specific factors
113482067 (SF3B1)
Chromosome and associated proteins [BR:
acun03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
113482067 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
HEAT_EZ
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
TALPID3
Motif
Other DBs
NCBI-GeneID:
113482067
NCBI-ProteinID:
XP_026708195
LinkDB
All DBs
Position
7
AA seq
1369 aa
AA seq
DB search
MHYVLVVLSLVAMEASGIPFQPSAALHQATKRIRNLICSLEETETTKGSMRKVFELYQFH
NYAIGWLHKNGVPSDDTDIEAQIREIQGKKPALDEAQGVGLDSTGYYDQEIYGGSDSRFA
GYVTSIAATELEDDDDDYPSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIA
DREDEYKKHRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLA
EKAKAGELKVVNGAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDE
TPGRAKGSETPGATPGSKIWDPTPSHTPAGAATPGRDTPGHATPGHGGATSSARKNRWDE
TPKTERDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTP
GKTPIGTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVL
PPPAGYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYF
DKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQI
LPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGRE
IISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSK
KSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEA
ATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIR
EFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVD
TTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDG
ILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLI
SRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKD
LLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRR
ATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNE
YRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHM
SLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLF
HPARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYIL
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgcactacgtgctagtagtgttgtccttggtagcaatggaagcttcaggtattcccttt
cagcccagtgctgcattgcaccaggccacaaaaagaatcaggaacttgatctgctctttg
gaagaaacagaaacaactaaaggatcaatgaggaaagtatttgaattgtatcagttccat
aactatgccataggatggcttcacaaaaatggagtaccttcagatgacactgatattgaa
gcacaaattcgagaaatacaaggaaaaaagcctgctcttgatgaagcacaaggagtaggc
cttgattccacgggatattacgatcaagaaatttatggcggtagtgacagcaggtttgct
ggatatgtcacttctattgccgcaactgaattggaagatgatgatgatgactacccttct
acaagtttgcttggccagaagaagccagggtaccatgctccagtggcattgcttaatgat
ataccacagtctactgaacagtatgatccttttgcagaacaccgtccccaaaagattgca
gatcgggaagatgagtacaaaaagcacaggcggatgatgataatttcccctgagcgtctt
gatccttttgcagatggagggaagacaccagatcctaaaatgaatgccagaacatacatg
gatgttatgcgtgaacagcatttaacaaaagaagagagggaaattaggcaacaactagct
gaaaaagctaaagctggagagctcaaagtcgtcaatggagccgcatctcagccaccttca
aaacgcaaacggcgttgggatcagacagctgatcagactcctggtgctacacctaaaaaa
ttatccagttgggatcaagcagagactcctggacatacaccatctctgcgatgggatgaa
actccaggccgtgcaaagggtagcgaaactcctggtgccaccccaggctcaaaaatatgg
gatccgactcccagtcatacaccagcaggagctgcgacacctggacgggacacaccgggc
catgcaacaccaggccatggaggtgccacttccagtgcacgtaaaaaccgatgggatgaa
acacctaaaacagaaagagatactccgggacatggcagtgggtgggctgagacgcctcgt
acagacagaggtggcgactccatcggtgagactccaacccctggagcaagtaaaaggaag
tcacgatgggatgaaacacctgctagccagatgggtggcagcactcctgttctcacccct
ggcaaaacacccattggtacaccagctatgaacatggcaactcctacaccaggtcatatc
atgagcatgactcctgaacagctgcaggcttggcgttgggaaagagaaattgatgagaga
aacaggccactttctgatgaagaattggatgctatgtttccagaaggatacaaggttctt
cctccaccagctggttatgtacctattcgcactccagctcgtaagcttacagccactcca
acacctttgggtggtatgactggattccacatgcagacagaagaccggactatgaagagt
gttaatgaccagccatctggcaatcttccattcctaaaaccagatgatatccaatacttt
gataaactgctggttgatgttgatgaatcaactctaagtcctgaagaacagaaggagaga
aaaataatgaaattacttctgaaaataaagaatggcacacctcccatgagaaaggctgca
ttgcgacaaattactgataaagctcgggaatttggagcagggccgttgtttaatcagatt
ctgcctctgctgatgtcaccaacacttgaagatcaggagcgtcacttgcttgtcaaagtc
attgacagaattctctacaaactggatgacttggtccgaccttatgtacacaagatcctt
gttgtcattgaaccactgctcattgatgaagactactatgctagagtggaaggcagagaa
attatttcaaacttggctaaggctgctggtttggcaaccatgatctccacaatgcgacct
gatattgataatatggatgaatatgtccgaaatacaacagctcgagcctttgctgttgtg
gcctctgctttgggcattccttctctgttacccttcttgaaagctgtctgtaaaagcaaa
aaatcctggcaggctagacatactggcatcaagattgtacagcagattgctattcttatg
ggttgtgctatcttgcctcatctcaggagcctggttgaaattattgaacatggtctggtg
gatgagcagcagaaagttcgcaccatcagtgctttggctattgctgctttggctgaagca
gctaccccctatggtattgagtcatttgattctgttctgaagcctttatggaagggtata
cgacaacacagaggaaagggcttggctgcctttttgaaggctattggttacctgattcca
ctcatggatgctgagtatgcaaactattataccagggaagtcatgctaatccttatcaga
gagttccagtctcctgatgaagagatgaaaaaaattgtgttgaaggtggtaaagcagtgt
tgtggcacggatggtgttgaagcaaactacattaaaacagaaatcttgccaccttttttc
aaacacttctggcagcacagaatggcactggacagaagaaattacagacagttggttgat
acaactgtggagctggcaaataaagttggagcagcagaaattatttccagaattgtggat
gatctgaaggatgaggctgagcagtacagaaaaatggtcatggaaacaattgagaagata
atgggaaatctgggggcagcagacattgatcataaactggaagaacaacttattgatggt
atcttgtacgcctttcaggaacagaccacagaggattctgtgatgctgaatggttttggg
acagtggttaatgctctaggcaaaagagttaaaccctacttgccacaaatctgcggtacg
gttttgtggcgtttgaacaacaaatcagctaaagttaggcagcaggctgctgacctgatc
tctcgtactgcagttgtcatgaagacgtgtcaggaggaaaaactgatgggacacttgggt
gttgtgctgtatgagtacctgggtgaagaatatcctgaagtactgggtagcatacttgga
gcacttaaggctattgtgaatgttataggtatgcacaagatgaccccgccaatcaaagat
ctgctgccacgacttacacctattttgaagaacagacatgagaaagtacaggaaaattgt
attgatcttgttgggcgcattgcagaccgaggtgcagaatatgtttctgcaagagaatgg
atgaggatctgctttgaactgcttgaattattaaaagctcacaagaaagctatccgaaga
gccacagtgaacacttttggttatattgcaaaagctatcgggcctcacgatgtgttggct
acactgctgaataacttgaaagtacaggaaaggcagaacagagtatgtactacagtagca
attgctattgtagctgaaacatgctcacctttcacagtgctgcctgcactcatgaatgaa
tacagagttccagaactgaatgtccagaacggtgtgttaaaatctctctctttcctgttt
gaatacattggagagatgggaaaagattacatttatgctgtcacaccattgcttgaagat
gctttaatggacagggatcttgtacacagacaaacagccagtgccgtggtacaacatatg
tctcttggtgtttatggttttggctgtgaagattctctgaatcatttgttaaattatgta
tggcctaatgtgtttgaaacctctcctcacgtcattcaggcagttatgggggctctggag
ggcctcagagttgctattggtccttgcagaatgttgcagtattgtttacagggtttgttt
caccctgccaggaaagtcagagatgtttattggaagatttataattcaatctacattgga
tcacaggatgctctgatagcacattatccaagaatctataatgatgaaaagaacacctat
attcgttatgaacttgattacatcttataa
DBGET
integrated database retrieval system
