Athene cunicularia (burrowing owl): 113482191
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Entry
113482191 CDS
T05777
Symbol
COL5A2
Name
(RefSeq) collagen alpha-2(V) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113482191 (COL5A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
acun00536
]
113482191 (COL5A2)
Glycosaminoglycan binding proteins [BR:
acun00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113482191 (COL5A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
TILa
Amnionless
Motif
Other DBs
NCBI-GeneID:
113482191
NCBI-ProteinID:
XP_026708376
LinkDB
All DBs
Position
7
AA seq
1496 aa
AA seq
DB search
MMAIWVQTRTFFILAALLGRFVTIKAQEEEEYDGGEDVEEIACTQNGQMYLNRDIWKPSP
CQICVCDNGAILCDEIQCQDVLECENPQVPPGECCPVCPHTTRDFDTTIGRGRKGQKGEP
GIVPPVSGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGIPGQPGDPGPPGH
PTHPGPDGLSRPFSAQMAGLDEKSGLGSQMGLMPGAVGPVGPRGPQGLQGKQGGAGPTGP
PGEPGDPGPMGPVGSRGPEGPPGKPGEDGEPGRPGQSGEPGFPGSPGPRGFPGAPGLPGL
KGHRGLKGLDGPKGEIGAAGAKGESGPTGAMGATGPLGPRGMPGERGRIGPQGAPGGRGQ
HGMPGKPGPMGPLGITGSPGFPGAPGIKGEAGPTGPRGPEGPQGQRGETGPQGPAGSQGL
PGTEGTDGSPGAKGPTGSPGTGGPLGLSGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGE
AGPKGEPGPQGPQGPIGPVGEEGKRGPRGDPGSVGPPGPVGERGAPGNRGFPGSDGLPGP
KGAQGERGPAGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGR
PGPAGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGP
PGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGE
RGEPGSSGLQGEKGMAGGHGPDGPKGSPGPSGTPGDPGPPGLQGMPGERGIAGTPGPKGD
RGGIGEKGAEGTAGNDGARGLPGPIGPMGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGE
NGPTGAVGFAGPPGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPPGPSGVPGLKGG
RGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGP
AGPPGGPGDKGDAGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGK
QGPTGPPGDKGPPGPIGQSGATGPVGEAGPEGPAGNDGTPGRDGAVGERGDRGEPGPAGL
PGSPGGPGTPGPVGPPGDAGQRGETGSRGPMGPPGRAGKRGLAGPQGPRGDKGDNGDRGD
RGQKGHRGFTGLQGLPGPPGPIGEQGSPGIPGPFGPRGPPGPVGPSGKDGSPGPLGPIGP
PGVRGSVGEAGPEGPPGDPGPPGPPGPPGHLTAAIGDIMGHYDDAMADPLPEFTEDEAAR
DDHNKTDPGVHATLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHPSKKSGEYWIDPNQG
CVEDAIKVYCNMETGETCISANPSAIPRKTWWASRLSDLKPIWYGLDMNRGSQFVYGDTA
VTQMTFLRLLSKEASQNITYLCKNSVGYMDDQTKNLKKAVILKGANDLEIKAEGNSRFRY
TVLHDSCSKRNGNVGKTVFEYRTQNVARLPIIDIAPVDIGSTDQEFGIEIGPVCFV
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaatctgggtacaaacgagaacttttttcatccttgctgctttattagggcga
tttgtaaccataaaagcgcaagaagaggaggaatatgacggtggagaagacgttgaagaa
atagcctgcactcaaaatggccagatgtacctgaacagggatatttggaagccctcaccg
tgccagatttgtgtctgtgacaacggagctattctttgcgatgaaatccagtgtcaagat
gtgctggagtgtgagaacccgcaggtgcccccaggagagtgctgtcctgtatgtccccat
acaacacgtgattttgacaccaccattggtagaggaagaaagggacaaaaaggagaacct
ggaatagtgccacctgtttcaggaatacgaggccgccccggaccagctggacctccaggc
tcacaaggaccacgaggagaacgaggaccaaagggaagacctggtcctcgtggtcctcag
gggattgatggtgaacctggtatccctggccagcctggtgaccctggtcctccagggcat
cctacccacccaggaccagatggactaagcaggccgttttcagctcagatggcaggactg
gatgagaaatctggacttggtagtcagatgggactgatgcctggtgcagtgggtccagtg
ggtccaagaggtcctcaagggctccaaggaaaacaaggtggtgctgggcccacgggccca
cctggtgaaccgggggatccagggcctatgggtccagttggttctcgtggaccagaggga
cctccaggcaaacctggtgaagatggtgaacctggtagaccaggacaatccggtgagcct
ggatttccaggatctccagggcctcgaggctttcctggtgctcctggtctcccaggtctc
aagggtcacaggggactgaaaggacttgatggtccaaaaggtgaaattggagcagctgga
gcaaagggagaatctggaccaacaggtgccatgggtgcaacgggtcctctaggtcctaga
ggaatgccaggagaaagaggtcgaattggaccacagggtgcccctggtggacgtggccag
catggtatgcctgggaagccaggaccaatgggcccacttggcataactggttctccaggg
tttccaggtgctcctggtataaagggtgaagcaggtccaacaggtcctcgtggtcctgaa
ggtcctcaaggacaaagaggtgaaacaggtccacagggtccagctggatcacaaggtctt
cctggtactgaagggacagatggttccccaggtgccaagggcccaactggatctccaggc
actggaggccctcttggtttatcaggtccacccggttccccaggaccacaaggcagtact
ggcccacctggtattcgaggtcaaccgggagaccctggtgtcccaggtttcaagggagaa
gcaggacccaaaggtgaacctggccctcaaggtccccagggtcccattggccctgtaggt
gaagaagggaagagaggtcctcgaggtgatccaggttcagtaggtccaccaggtcctgtt
ggagagaggggtgctcctggtaatcgtggttttccaggttctgatggcttgcctggacca
aagggtgcccaaggggagcgcggtccagcaggttcttctggtcctaaaggaggtcaggga
gatcctgggcgtcctggtgaacctggcctcccaggtgcaaggggtttgacaggaaatcca
ggtgttcaaggaccagaaggaaaacttggccccttgggtgctcctggagaagatggacgt
ccaggtccagcaggttcaataggaatcagaggccagccaggcagcatgggccttcctggg
ccaaagggtagtagtggtgatcctggaaaacccggagaagctggcaatgcaggtgtccca
gggcagagaggagcccctggtaaagatggagaagttggtccttctggtcctgttggtcca
ccaggtctggcaggagaaagaggagaacaaggccctccaggtcctacagggtttcagggc
ttaccagggccaccaggtcctccaggtgagggaggaaagccaggcgatcagggtgttcct
ggagatcctggagctgttggtccattgggccctaggggagaacgtggcaatccaggggaa
aggggagaaccaggatcatcaggactccagggtgaaaagggtatggctggaggtcatggt
cctgatggtccaaagggaagcccaggccctagtgggacacctggtgatccaggcccgccg
ggtcttcaaggtatgcctggagaaagagggattgctggaacgcctggccccaagggcgac
agaggcggcataggtgagaaaggtgctgaaggtacggctggtaatgatggggcaagaggt
ctccctggtccaataggcccaatgggtccagcaggtcctactggtgaaaagggtgaacca
ggtcctcgaggtctagttggtcctcctggctcccgtggaaaccctggttcccgaggagaa
aatggcccaactggcgctgttggttttgctggtcctccgggccctgatggtcagccaggt
gtgaaaggtgaacctggagaacctggacagaagggagatgctggatccccaggaccacag
ggtcttgctgggtctcctggtccaccaggaccttcaggtgttcctggtctgaaaggtggt
agaggaactcagggtccacctggtgctactggattcccaggatctgctggaagagttggg
cctccaggacctactggagctccagggcctgctgggcctattggtgagccaggaaaagaa
ggtcccccaggtcttcgtggtgaccctggttctcatggccgtgtgggagatcgagggcca
gccggtcctcctggtggtcctggagacaagggtgacgcaggagaagacgggcagccaggc
ccagatggcccccctggtccagcaggaactactggtcaaagaggtattgttggtatgcca
ggacagcgaggggaaagaggcatgccagggctgccaggtcctgcaggtactccaggaaaa
caaggtcccacagggccacctggtgataaaggtcccccaggacctattggccagtctggt
gccactggacctgtaggtgaagctggtccagaaggacctgctggtaatgacggtactcct
ggacgagatggagctgttggagaacgtggtgatcgtggtgaacctggccctgcaggctta
ccaggttccccagggggtccaggaactccaggtcctgttggcccaccaggagatgcaggt
caaagaggtgaaactggttctcgaggtccaatgggtccaccaggtcgtgcaggaaaaaga
ggtttagcgggtccccaaggacctcgtggtgacaaaggtgacaatggagatcgaggtgat
aggggccagaaaggacacaggggtttcactgggctacaaggtcttcctggtcctcctggt
cctattggtgaacagggcagtcctggcattccaggcccatttggtcctcggggtcctcca
ggtccagttggtccttctggcaaagatggaagtcctggtccacttgggccaattgggcct
cctggtgttagggggagtgtaggagaagccggacctgagggtccaccaggtgatcctggc
cctcctggccctccaggacctcctggccatctcactgctgccattggtgacattatggga
cactatgatgatgctatggcagatccactaccagagtttactgaagatgaagcagccagg
gatgaccataataaaacagacccaggagtccatgccaccctgaagtcactgagcagccag
attgagactatgcgcagcccagatggttcaaaaaaacacccagcacggacttgtgatgac
ctgaagctatgccacccatccaagaagagtggtgaatattggattgatcctaaccaagga
tgtgttgaagatgctataaaagtatactgcaacatggaaactggagagacctgtatttct
gcaaacccatctgctataccacgtaaaacatggtgggccagcaggttgtctgatttaaag
cccatttggtatggccttgatatgaacaggggatcacagtttgtatatggggatacagct
gtcactcagatgacattcctgcgcctcctatcaaaggaagcttcccagaatatcacttac
ctttgtaaaaacagtgttggttacatggatgaccagacgaagaacctgaaaaaagctgta
attctgaaaggggccaatgatctggagatcaaagcagagggaaacagccgattcagatac
actgttcttcatgacagttgttctaaacgtaatggaaatgtgggcaagactgtttttgag
tacagaacacagaatgtggcacgtttacctatcatagatattgcgccagtggacattggc
agtactgaccaggaatttggaattgaaattgggccagtttgctttgtgtaa
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