Anser cygnoides domesticus (swan goose): 106041446
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Entry
106041446 CDS
T04896
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
acyg
Anser cygnoides domesticus (swan goose)
Pathway
acyg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106041446 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acyg03400
]
106041446 (LIG3)
Enzymes [BR:
acyg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
106041446 (LIG3)
DNA repair and recombination proteins [BR:
acyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
106041446 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
106041446
NCBI-ProteinID:
XP_013045332
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MPVGGRALAQAARVLGRGAALGLCRPPLSSAGPRRCPAAGSPRGRLAASGACGGRPGAER
GGGVGGGLPAVIAGPPEGCPAPGGAMAEQRYCVDYAKRGTAGCKKCKEKLVKGTVRIGKI
VPNPFTESGGEMKEWYHVRCMFEKLEKARATTKKIEDITDLEGWEELQDEEKELIHKHIA
EATTKAASTPKKKATVQAKLTPTGQITSPSKDPLAAVNPKKFSGFTAKPKNSEDVPANSS
HKSSLSAKKSDPKHKDCLLREFRKLCAMVADKPSYNVKTQIIQDFLKKGTGGDGFHGDVY
LTIKLLLPGVIKIVYNLNDKQIVKLFSRIFNCSQEEMIRDLEQGDVSETIRLFFEQSKSC
PPAAKSLLTIQEVDEFLIQLSKLTKEDDQQSVLHDITRRCTGNDLKCIIRLIKHDLKMNA
GAKHVLDALDPNAYEAFKASRNLQDVVERVLKNQQEAEKMPGLKRTLSVQASLMTPVQPM
LAEACKSIEYAMKKCPNGMYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDF
IPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDIS
LMDRPLRERRKFLHDNMVEIPNRILFSEMKHVSKASDLADMITRVIREGLEGLVLKDIKG
NYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPKSEKWC
TVTKCAGGHDDATLARLQTELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKKAPVWEI
TGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKTATNLPQLKELYQLSKEKADFSVVAGE
EEESTAGSSGENEGNSRSSTPHKTTKTPPSKSPAKAKKPEGTKAITESPQKPEEKRGEKR
KASEMDDNGKKTLLDIFTGVKLYLSPSVKDFNKIRRYFIAYDGDLVPEFDTASATHVIGD
IDENPGAKRVSPNWIWECIRKRRLVAPC
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttggcggcagggctctggcccaggctgcccgggtgctcggtcgcggcgcggcc
ctcggcctctgccggccgccgctctcctcagcggggccccgccgctgccccgccgcgggc
agcccccggggccggttagcggcgagcggagcctgcggaggccgcccgggggcggagagg
ggcggcggggtcggaggggggctcccggcggtgatcgcggggccgccggagggctgcccg
gccccggggggggcgatggcggagcagcggtactgcgtggactacgccaagcgcggcacg
gccggctgcaagaagtgcaaggagaagctggtgaagggcacggtgcgcatcgggaagatc
gtgcccaaccccttcaccgagtccggcggggagatgaaggagtggtaccacgtcaggtgc
atgtttgagaagctggagaaggcccgcgccaccaccaagaagatcgaggacatcacggac
ttggagggctgggaggagctgcaggacgaggagaaggagctaatccacaagcacatcgca
gaagctactaccaaggctgcaagtacgccgaagaaaaaagcaacagtccaagctaagctc
actcccacaggacaaataaccagtccctcaaaggatccgttagctgctgtcaatccgaag
aagttctctggcttcacagccaagccaaagaattcagaagatgttcctgcaaactcttcc
cacaagtctagtctgtctgcaaaaaaaagtgatccgaagcacaaagactgcttgctgcga
gagttcaggaagctctgcgccatggttgccgacaagcccagctataatgtgaaaacgcag
atcatccaggacttcctgaagaagggaactggaggagatggttttcatggtgacgtatac
ctgaccattaagctgctgttaccaggcgtcattaaaattgtttacaacttgaacgataag
cagattgtaaagctgtttagtaggatttttaactgcagccaagaggaaatgatccgggac
ctggaacagggagatgtctccgagaccatacgcctcttctttgaacagagcaagtcttgt
cctccagcagctaaaagtctcctgaccatccaagaggtagatgagttcctaatccagcta
tcaaagcttactaaggaagatgaccagcaaagtgtgctgcacgatatcactcgcagatgt
acgggcaacgacctgaaatgcatcatcaggctaattaagcatgacctgaaaatgaatgct
ggtgcaaagcatgtgctggatgctttggatccaaatgcttatgaggcattcaaagcgtca
cgcaacctccaggatgtggtagagcgagtcctgaagaaccagcaggaggccgagaagatg
ccagggctgaagcgaaccctcagcgtgcaggcctccctgatgaccccagtgcagcccatg
ctggctgaagcctgcaagtcaattgagtatgccatgaagaagtgcccaaatggcatgtat
gcggagatcaaatacgatggtgagcgagtgcaggtccataaaaatggagatcacttcagc
tacttcagccggagcctcaaacctgtccttcctcacaaagtagcacattttaaggacttc
atcccccaggctttccctggcgggcacagtatgatcctggattcggaagttcttctaatt
gataacaaaactggcaagccacttccttttgggactcttggtgtgcataagaaagctgct
ttccaagacgccaatgtttgcttgtttgtgtttgactgcatctatttcaatgacatcagc
ctgatggacaggcctctgcgcgagcgtcgcaagtttctacatgataacatggttgaaatc
cccaaccggatcctcttctcagagatgaagcatgtctcaaaagcttcggatctggcagat
atgatcacccgagtcatccgtgaaggactggaaggactggtgttgaaagatataaagggt
aattatgaaccaggaaaacggcactggctgaaagtgaaaaaggactacttaaatgagggt
gcaatggctgacacagcagacttggtggtgctgggagctttctatgggcaaggcagtaaa
ggtgggatgatgtccattttcctcatgggctgctatgatcccaagagtgagaagtggtgt
actgtgaccaagtgtgctggtggccatgacgatgccaccttggcccgtctgcaaacagag
ctggatatggtgaagatcagcaaggatcccagtaaaattccaagctggctaaaaattaac
aaaatctactacccagacttcattgtcccagatccaaagaaagccccagtatgggagatc
acaggagctgaattctctaaagcagaagcccacactgcagatgggatctccattcgcttc
cctcgctgcacccgcattcgagatgacaaggactggaagacagccaccaacctcccgcag
cttaaggagctgtaccaactctccaaagaaaaggctgacttcagtgttgttgctggggag
gaagaagagtccacggctggcagcagtggagagaatgagggaaattccaggtcttccacg
ccacacaagactactaaaactcccccaagcaagtcacctgcaaaagccaagaagccagaa
ggcactaaagcaatcactgaatcccctcaaaagccagaggagaaacgaggagagaagcga
aaagcatctgagatggatgacaatggaaagaagacactgctggacatattcactggtgtg
aagctgtacctatcgccctccgtgaaggatttcaacaaaatccgtcgctacttcatagca
tacgatggtgatcttgtgccagagtttgacacagcctcagcaacgcatgttataggggac
attgatgagaatcctggtgctaagcgtgtatctccaaactggatctgggaatgcatacgc
aaacggagactggtagccccatgctag
DBGET
integrated database retrieval system
