Anser cygnoides domesticus (swan goose): 106043318
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Entry
106043318 CDS
T04896
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
acyg
Anser cygnoides domesticus (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106043318 (TRIM71)
04121 Ubiquitin system [BR:
acyg04121
]
106043318 (TRIM71)
Enzymes [BR:
acyg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106043318 (TRIM71)
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106043318 (TRIM71)
Ubiquitin system [BR:
acyg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106043318 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
zf-RING_5
zf-C3HC4
zf-RING_UBOX
DUF4094
Motif
Other DBs
NCBI-GeneID:
106043318
NCBI-ProteinID:
XP_047933943
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MASFPESDFQICPLCKEMCGSPAPLSSNSSTSSSSSQTSSSSGGGGGGGGSSCGGPPRRL
HVLPCLHAFCRQCLEAQRHPGAGDALKLRCPICDQKVVISEPSGMDALPSSNFLLSNLLD
VVVVAAAADEHKNGRPAGTGPAAGAAPGVGGGNNRHHGRPPPHRAAAPGSSPAAASSSSS
AAPSSTSSSSSGGGSSAALLLRRPHSRQGEPRCSSCDEGNAASSRCLDCQEHLCDNCVRA
HQRVRLTKDHFIERFAAGPPPSAAAAAAAGPAAPLALSPPYPASPYNILSVFPDRASYCQ
HHDDEVLHFYCDTCSVPICRECTMGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAI
QLSIEQAQAVAEQVEMKAKVVQSEVKAVTTRHKKALEERECELLWKVEKIRQVKAKSLYL
QVEKLRQNLNKLDNTISAVQQVLEEGRTMDILLARDRMLAQVQELKNVRGLLQPQEDDRI
MFTPPDQALYMAIKSMGFVSSGAFAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLS
GGDMISAVVMGPDGNLFGADVSDQQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVM
VKSGRSYIGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTF
HHKFGTLGSRPGQFDRPAGVACDISRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQ
FNYPWDVAVNAEGKILVSDTRNHRVQLFGPDGAFLNKYGFEGALWKHFDSPRGVTFNHEG
HLVVTDFNNHRLLVIHADCQSARFLGSEGSGNGQFLRPQGVAVDQEGRIIVADSRNHRVQ
IFESNGSFLCKFGTQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttcccggagtccgacttccagatctgcccgctgtgcaaggagatgtgcggc
tcgccggctcccctctcctccaactcctccacgtcgtcgtcctcctcgcagacctccagc
tcctccggggggggcggcggcggcggcggctcgtcctgcgggggccctccgcggcggctg
cacgtcctgccctgcctgcacgccttctgccgccagtgcctggaggcgcagcggcacccc
ggcgcgggggacgcgctcaagctgcgctgccccatctgcgaccagaaggtggtgatctcg
gagccgtcgggcatggacgcgctgccctcctccaacttcctcctcagcaacctgctggac
gtcgtggtggtggcggcggccgccgacgagcacaagaacgggcgccccgccggcaccggg
cccgccgccggggcggcaccgggggtgggcggcggcaacaaccggcaccacggccgcccc
ccgccgcaccgagccgccgcgccgggctcctcgcctgccgccgcctcctcctcgtcctcc
gccgcgccttcctcgacgtcctcctcctcgtcgggcggcggctcctcggccgcgctcctg
ctgcggcggccgcacagccggcagggcgagccgcgctgcagctcctgcgacgagggcaac
gccgccagctcccgctgcctcgactgccaggagcacctgtgcgacaactgcgtgcgggcg
caccagcgggtccgcctcaccaaggaccacttcatcgagcgcttcgccgccgggccgccc
ccctccgccgccgccgctgctgccgccgggccggccgcgccgctcgccctcagcccgccc
taccccgcctcgccctacaacatcctctccgtcttccccgaccgggccagctactgccag
caccacgacgacgaggtactgcatttctactgtgatacttgctctgtccccatatgtcgg
gaatgtaccatgggacgacatgtgggtcacagctttatctacctccaagatgctcttcag
gactccaggactcttaccatccagctcctggcagatgctcagcaaggacgacaagctatt
cagttgagtattgaacaggcccaggcggtggcagagcaagttgagatgaaagctaaggtg
gtacagtctgaagttaaagcagtgacaactagacacaagaaggccttggaagagcgggag
tgcgagctgctctggaaggtggaaaagattcgtcaagtcaaggctaagtcactctacctg
caagttgaaaagttacgtcagaacctaaataagctggacaacaccattagtgctgttcag
caggtcctggaggaaggtcgtaccatggatattcttctggcccgggaccgtatgctggct
caggtgcaggagctgaagaatgtgaggggccttctccagccacaggaggatgacaggatc
atgttcacgccccctgaccaggccttgtatatggccattaaatcaatgggctttgttagc
agtggggcttttgctcctctgaccaaagccactggggaaggcctcaagcgcgcactgcag
ggcaaagtagcctctttcacagtgataggctatgaccacgatggtgagcctcgcctttca
ggaggtgacatgatctctgcagtggtgatgggtccagatggaaacctttttggggcagat
gtcagtgatcaacagaatgggacctacctggtcagctaccgtccacagctagagggagag
catctggtatccgtgatgatgtgcaaccaacacattgagaacagtcccttcaaagtcatg
gtgaaatctgggcgcagctacataggtatcgggctacctgggctctcgtttggcagtgag
ggagatagcgatggcaaactctgtcgcccctggggggttagtgtagacaaagaaggctac
atcattgtggctgaccgcagcaataaccgcatccaggtgttcaaaccgtgcgggactttt
caccacaagtttggcacgctgggctcccggcctggccagttcgatcggcctgctggtgtg
gcctgtgacatctcgcgtaggatcgtcgtggctgacaaggacaatcatcgcatccagatc
ttcacattcgaagggcagttcattctgaagtttggggagaaaggaacaaagaacggacaa
ttcaattacccatgggatgtggctgtcaatgcagagggcaagatcctggtctctgacaca
aggaaccatcgcgttcagctgtttgggcctgatggtgcatttcttaacaagtatggcttt
gaaggggcactctggaagcactttgattcccccagaggtgtgactttcaatcacgagggc
cacttggtcgtgacagacttcaacaaccatcgcctcctggtcatccacgcagattgccag
tcagcacgctttctgggctcagagggcagcgggaacggccagttcctgcgcccgcaggga
gtggcggtggatcaagaggggcgcatcattgtggccgattccaggaaccaccgggtgcag
atatttgagtcaaatggtagctttttatgcaagtttggcactcagggaagcggcttcggt
cagatggaccgtccttcaggtatagccgtcacccctgatggcatgattgttgtggtcgac
tttggaaacaatcgaattctcgtcttctaa
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