KEGG   Anser cygnoides (swan goose): 106049362
Entry
106049362         CDS       T04896                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
acyg  Anser cygnoides (swan goose)
Pathway
acyg03030  DNA replication
acyg03410  Base excision repair
acyg03420  Nucleotide excision repair
acyg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acyg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106049362
   03410 Base excision repair
    106049362
   03420 Nucleotide excision repair
    106049362
   03430 Mismatch repair
    106049362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acyg03032]
    106049362
   03400 DNA repair and recombination proteins [BR:acyg03400]
    106049362
Enzymes [BR:acyg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     106049362
    6.5.1.6  DNA ligase (ATP or NAD+)
     106049362
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     106049362
DNA replication proteins [BR:acyg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    106049362
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     106049362
DNA repair and recombination proteins [BR:acyg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     106049362
   NER (nucleotide excision repair)
    Other NER factors
     106049362
   MMR (mismatch excision repair)
    Other MMR factors
     106049362
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 106049362
NCBI-ProteinID: XP_066843234
LinkDB
Position
W:7200070..7206901
AA seq 782 aa
MPPGNPSYPPAPPVNPQHPPVTPGAPRCPPPVNPGAPRYPPVPPDDPRTPDDPCTPQSPY
YHASPIPVPPTSYAVTPRPHTPPAPPAPPSAPPPPGDEDGAPPPPPPKRCRQDRGPPAAS
SPPPLDPSQYDPARSGYHPLRDACWGPGQSVPYLAVARTFERIEEASARLKIVETLSNFL
RSVLALSPGELLPCLRLCLNRPGAAAEGLELGVGESLLTRALAQATGRQLAQIRGEAQAK
GDLGLVAESSRCTQRTVVAPARLSAAGVLGKLREMAATSGNASASKKIAIIKGLFVACRH
SEARYLVRSLSGKLRIGLAEQSVLTALAHAVALTPPGQGWPPAVLDAGQDMAPEARRAWL
EEQSRILKQTFCELPDYAAIVPALLEHGLEQLPQHCGITPGVPLKPMLAQPARGVGELLK
RFEEAAFTCEYKYDGERAQIHVLENGAVFIYSRNQENTTAKYPDLVDRIPKVLKPGVRSC
ILDAEAVAWDRATRQIQPFQVLMTRKRKDVDAAAIKVQVCLYAFDLLYLNGEPLVRQPLA
ARRKLLRQSFEEVEGEFVFATAADTRSAEEVSDFLDKAIKASCEGLMVKTLEADATYEIA
KRSHKWLKLKKDYLDGLGDTLDLVVIGAYLGKGKRAGIYGGFLLACYDEESEEYQSICKI
GTGFTEESLEKHYGFLKEHVLAQPRPYYRWDSGAAPDRWLAAVQVWEVKCGDLSISPVYR
AAVGLVDEEKGISLRFPRFLRVREDKKPEEATSSTQVAELYKKQQQIQNQQQAEKGEDEE
FY
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgccccccggtaacccctcgtaccccccagcacccccggtgaacccccagcaccccccg
gtgacccccggtgccccccggtgcccccccccggtgaaccccggtgccccccggtaccct
cccgtaccccccgatgacccccgtacccccgatgacccctgtaccccccagtccccctat
taccacgccagccccatcccagtaccccctacatcttacgccgttactcccaggccccac
acccccccagcccccccggctccccccagtgcccccccgcccccgggggacgaggacggg
gcccccccccctcccccccccaagcgctgccgccaggaccggggacctccggccgccagc
agccccccgccgctggacccgtcccagtacgaccccgccaggagcgggtaccacccgctg
cgggacgcctgctgggggcccgggcaaagcgtcccctacctggcggtggctcgcaccttc
gagcgcatcgaggaggcctcggcccggctgaagatcgtcgagaccctcagcaacttcctg
cgctcggtgctggccctgtccccgggggagctcctgccctgcctgcgcctctgcctcaac
cgcccgggggccgccgccgaggggctggagctgggcgtcggcgagagcctcctcacccgc
gccctcgcccaggccaccggccggcagctggcgcagatccgcggcgaggcgcaggccaag
ggggacctggggctggtggccgagagcagccgctgcacccagcgcaccgtggtggccccc
gcccgcctcagcgccgcgggggtcctgggcaagctgcgggagatggccgccacgtcgggc
aacgcctcggccagcaagaagatcgccatcatcaaggggctcttcgtcgcctgccggcac
tcggaggcgcgctacctcgtgcggtcgctcagcgggaagctgcgcatcgggctggccgag
cagtcggtgctcaccgccctggcgcacgccgtggcgctcacccccccggggcaagggtgg
ccgccggccgtgctggacgccgggcaggacatggcacccgaggctcgcagggcatggctg
gaggagcagagccgcatcctcaagcagaccttctgcgagctgcccgactacgccgccatc
gtcccggcgctgctggagcacgggctggagcagctgccccagcactgcggcatcacccca
ggtgtccccctgaagcccatgctggcccagcctgcccgcggcgtcggggagctgctgaag
cgcttcgaggaggcagcgttcacctgcgagtataaatacgacggcgagcgagcccagatc
cacgtcctagagaacggggccgtcttcatctacagccgcaaccaggagaacaccaccgcc
aagtaccccgacctcgtggaccgcatccccaaggtgctgaagcccggcgtgcgctcctgc
atcctggacgcggaggccgtggcgtgggatcgggccacgaggcagatccagcccttccag
gtgctgatgacgaggaagaggaaggacgtggacgccgccgccatcaaggtgcaggtctgc
ctctacgccttcgacctgctctacctcaacggggagcccctggtgcggcagcccctggcc
gcgcggcgcaagcttctgcggcagtccttcgaggaggtggagggcgagttcgtcttcgcc
accgccgccgacacccgcagcgccgaggaggtctcggacttcctcgacaaggccatcaag
gcctcctgcgagggcctcatggtgaagaccctggaggcggacgccacctacgagatcgcc
aagcggtcgcacaagtggttgaagctgaagaaggactacctggatgggctcggggacacg
ctggacctggtggtcatcggcgcctacctgggcaagggcaagcgtgcaggcatctacggg
ggcttcctgctggcctgctacgacgaggagagcgaggagtaccagagcatctgcaagatc
ggcaccggtttcacggaggagagcctggagaagcactacggcttcctcaaggagcacgtc
ctggcccagccgcgtccctactaccgctgggacagcggcgcagcccccgaccgctggctg
gcggcggtgcaggtctgggaggtgaagtgcggggacctctccatctcccccgtctatagg
gcagccgtggggctggtggacgaggagaagggcatctcgctgcgcttcccccggttcctg
cgtgtgcgggaggacaagaagccggaggaggccaccagcagcacccaggtggccgagctg
tacaagaagcagcagcagatccagaaccagcagcaggcagagaaaggggaggacgaggag
ttttactga

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