Anser cygnoides domesticus (swan goose): 125181157
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Entry
125181157 CDS
T04896
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
acyg
Anser cygnoides domesticus (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acyg04515
]
125181157
Cell adhesion molecules [BR:
acyg04515
]
Cadherins
Protocadherins
125181157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
125181157
NCBI-ProteinID:
XP_047911081
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MERTPERDSCHKKAAAVGRVLVAMLIAGKLCEHAGVWQGLRDGGQERVPSRSSPAAGRRV
VLLAKAAASGCEPGGAEPTTTRSSAAGRRRRAVLRAEQRSSRWRSRTAALRAASRPGERE
RGRPRGRAPARPAALLPGAASRGGLRQTEGVRRPAMASARQVLCLCALLCVPRVRCEPIR
YSVAEEGESGSVVANVAEDAGLTPAQLSARRARIASPAGRQHFRLERATGRLVLAERLDR
EELCGRSLTCTLAFELLLENPLQFFRVEVAVEDVNDHSPVFPEERVTFQILETSDPGSRF
PVEAAHDLDVGSNSIQAYTIAPENEYFSVSFETHSDDDKYVDLVLDQTLDREAHSELLFS
LIATDGGSPPRSGTTQIHIVVLDVNDNAPTFTQKLYIGRVLENAPMGSVVLSVVATDPDV
GLNGDISYRFSQSVGESHLPFTIDSMSGEIRVTKILDFEDAQKYEISVRATDGGGLSGMC
NVMVEVVDVNDNAPELVVSFFSSPLPENAEPGTVVALFAVRDRDSGVNGEITCALEDQLS
FSLRPAYKNYYELVTVSTLDREETAQYLLVITAEDAGSPPLTTTQTFTVDISDVNDNAPV
FNQTSYAMYVRENNIPAVLVGAVSAVDSDAGPNAKVIYSLGPVHPTERDPCSCISVNSEN
GHVFVLRPLDYEQVRQLEVLVSATDGGSPPLSTNVTVRLVVVDENDNAPVVLHPAQDSSP
PSSELVPASSEVGDLVTKVVAVDADSGQNSWLSFHLLRATDPGLFAVGTQNGEVRLRRPV
TERDAMKQKLEVLVRDNGRPPLSATAALSVLLLNGLSQEHLPQQEVAVQDEDSSLTIYLI
ISLVFVSVLFLTSVAAFVACKVCKRKELKGGHVLYGTGNLQSSLADGAAAGTLPHTYCYE
INLTTGSGNSEFKFLRPILPNLPPQHSGTGRGFDDTEDFPPVPNSMGDGALDISGPSSVG
HFNGLPFN
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaacacccgagcgcgattcctgccacaaaaaggctgctgctgttgggagagtc
cttgtagcgatgttgattgcaggcaagctctgtgagcacgccggcgtttggcaagggctg
agagacggcggccaggagcgcgtcccgtcccggagcagtcccgccgcgggccgcagggtg
gtgctcctggccaaggcggcggcgagcggctgcgagccgggaggagccgagcccactaca
acgcggagcagcgcagccgggaggcggcggcgagcggtcctccgcgccgaacagcgcagc
agccgctggcggtcccggacggccgcgctgcgggccgccagccggcctggcgagagggag
agagggaggccgcgagggagggcgcccgcccgccccgccgcgctgctgccgggcgccgct
tcccgcggaggactgcggcagacggagggtgtccgccgccccgccatggcgtctgcaagg
caagtgctttgtctgtgtgctttgctgtgcgtgccgcgcgttcgctgcgagcccatccgc
tactccgtagccgaggagggggagagcggctccgtggtggccaacgtggcggaggacgcg
gggctgaccccggcgcagctctcggctcgccgggcacgcattgcctcaccggccggccgg
caacactttcgcttagagcgcgccaccggccgcctcgtcctggcggagcggctcgatcgc
gaggagctgtgcggccgctcgcttacctgcacgctcgccttcgagctcctgctcgaaaac
ccgctgcagttctttcgggtcgaggtggccgtggaggacgtcaacgaccactcgccggtc
tttcccgaggaacgagtcacttttcagatcctggaaaccagtgaccctggctcacgtttc
cccgtggaggcagctcatgacctggacgttggcagcaacagcatccaggcttacaccatt
gctcctgagaacgaatattttagtgtctctttcgagactcacagtgatgatgacaagtat
gtcgacttggtcttagatcaaacgctggacagagaggcacattcggagttgcttttcagt
ctcattgctacagacggtggctctccacctaggagcgggaccacccaaatacacatcgtg
gttctagatgtaaatgataatgctcctaccttcacacagaagctttacattggtcgggtt
ttggaaaatgccccaatgggctctgtggttctcagtgtcgtggctaccgatccagatgtg
ggactgaatggtgacatctcctacaggttcagccaatcggtgggtgagagccacttgcca
ttcaccattgacagtatgagtggtgaaatccgagtcacaaagatcctggatttcgaagat
gcacagaaatatgagatcagtgtgcgcgcaactgatggtgggggcctctcaggcatgtgc
aatgtgatggtggaggtggtggatgtgaacgacaatgcaccggagctggtggtcagtttc
ttcagcagtcccctccccgagaacgcagagcctggaacagtggtcgccctctttgctgtg
agagaccgggattctggtgtgaatggggagatcacctgtgcccttgaagaccagctctcc
ttctccctgaggccagcctataagaattactatgagctggtgaccgtgagcacattggac
cgggaggagacagctcagtaccttctggtcatcacagcggaagacgcaggttctcctcct
ctcaccaccacccagaccttcacggtggacatctccgatgtcaatgacaatgcccctgtc
ttcaaccagacatcatacgccatgtatgtgcgagagaacaatatccctgcagtgcttgtt
ggggctgtcagtgcagtggactcagatgcaggacccaatgccaaggtgatctattccctg
gggcctgtgcaccccacagagcgggacccctgttcctgcatctccgtgaactcagagaac
ggacatgtgtttgtgctgcgtccactggactatgagcaggtgaggcagcttgaggtgctg
gtgagtgccaccgatgggggatcccctcccctcagtaccaacgtcaccgtccgcctcgtc
gtggtggacgagaacgacaatgccccagtggtgttgcaccctgctcaggacagcagccca
ccatccagtgagctggtgccagcctcgtccgaggtgggggacctggtcaccaaagtggtg
gccgttgatgccgactctggtcagaactcctggctttccttccaccttctaagggccaca
gatcctgggctgtttgctgtgggtacccaaaatggggaggtacggctgaggaggccagtg
acagagagggatgccatgaagcagaagcttgaagtgctggtgcgtgacaatgggaggcca
ccactgtcggccactgcagcactgagtgtactcctcctcaacggcctctcacaggaacac
ctgccacagcaggaggtggccgtgcaggatgaagacagctccctgacaatctatttaatc
atttcactggtctttgtctccgtcctcttcctcacatctgtcgcagcctttgttgcttgc
aaggtgtgcaagagaaaggagctgaaaggagggcacgtgctgtatggcacaggcaacttg
cagagcagtctggctgatggggctgctgctgggaccctgccccacacctattgctacgag
atcaacctcaccacaggctcaggcaacagcgagttcaagttcctgaggcccatcctcccc
aacctgccaccacagcactctggcacaggcaggggttttgatgacacagaggatttccca
ccagtccctaactccatgggggatggagccctggacatctctggtccatcatctgttgga
cactttaatgggcttccctttaactag
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