Anaeromyxobacter dehalogenans 2CP-C: Adeh_0962
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Entry
Adeh_0962 CDS
T00326
Name
(GenBank) conserved hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
ade
Anaeromyxobacter dehalogenans 2CP-C
Pathway
ade03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ade00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Adeh_0962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ade03400
]
Adeh_0962
Enzymes [BR:
ade01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Adeh_0962
DNA repair and recombination proteins [BR:
ade03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Adeh_0962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
ABC80737
UniProt:
Q2IPK4
LinkDB
All DBs
Position
complement(1108669..1109610)
Genome browser
AA seq
313 aa
AA seq
DB search
MARAQQGVEVEVEGRRILLRNLDKVFYPEAGFTKGEVVDYYRRVAPVLLPHLRDRPLTLK
RYPEGVEGPHFYEKRCPRHRPDWFRTEAIWSEGNQEYIDYCVVDDLSSLVWLASIADLEL
HPSLSLVDDVERPTALVFDLDPGPPADLLACCEVALLLRRLLAALGLEAFPKSSGSKGMQ
LYVPLSGATYADTKPFAHAVARLLERRHPQLVVERMAKALRGGKVLVDWSQNDPHKTTVC
VYSLRARPRPTVSTPLRWAEVEKAARTRDAGGLVFEAAAVLRRVERVGDLFAPVLTLRQR
LPAPAELERAAGA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgcgcagcagggcgtggaggtcgaggtggaggggcggcggatcctcctccgc
aacctcgacaaggtgttctaccccgaggccggcttcaccaagggcgaggtggtggactac
taccgccgcgtcgcccccgtgctcctgccgcacctgcgcgaccggccgctcacgctgaag
cgctacccggagggcgtggagggcccgcacttctacgagaagcgctgcccgcgccaccgc
ccggactggttccggaccgaggcgatctggagcgagggcaaccaggagtacatcgactac
tgcgtggtggacgacctgtcctcgctggtgtggctcgccagcatcgccgacctcgagctc
cacccctcgctgtcgctggtggacgacgtggagcgccccaccgcgctcgtgttcgacctc
gaccctggcccgcccgcggacctgctcgcgtgctgcgaggtggcgctgctgctgcgccgg
ctgctcgccgcgctcggcctggaggcgttcccgaagagctccggctcgaagggcatgcag
ctgtacgtgccgctctccggcgcgacgtacgccgacacgaagccgttcgcgcacgcggtc
gcccgcctgctcgagcggcggcacccgcagctcgtggtggagcggatggcgaaggcgctc
cgcggcgggaaggtgctggtggactggagccagaacgacccgcacaagaccacggtctgc
gtctactcgctccgggcgcggccgcggcccaccgtctcgaccccgctgcgctgggcggag
gtggagaaggcggcccggacgcgcgacgcgggcgggctggtgttcgaggccgcggcggtg
ctccgccgggtcgagcgcgtcggcgacctgttcgccccggtgctgacgctgcgccagcgc
ctgcccgctcccgcggagctcgagcgggcggccggcgcctga
DBGET
integrated database retrieval system
