Acropora digitifera (stony coral): 107331207
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Entry
107331207 CDS
T04352
Name
(RefSeq) exosome complex component RRP46-like
KO
K12590
exosome complex component RRP46
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107331207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107331207
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107331207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Phage_TAC_1
DUF6703
Motif
Other DBs
NCBI-GeneID:
107331207
NCBI-ProteinID:
XP_015751243
LinkDB
All DBs
Position
Un
AA seq
233 aa
AA seq
DB search
MADEAMDVNISNNSSELRSMRCEQCLLNKSDGSASFSQGDTQVIAAAYGPAEVRLSREII
DKATLEVVFRPKVGVPGCAEKLKERVIRNSCEPVVLIMQHPRSSLMIVIQLIQDCGSLLS
CAINAACMAMVDGGFPMKCLVCAVTCCLTEFGEIHLDPTLEQEKCASAVMTFAFDSIDQN
VMTSSTSGKFTFQQYDKCLEACRSAAIKLFDFFRLSVERKLSKDAKFMDLNIA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggcaatggatgttaacatctcaaacaattcgtccgaattgaggtcgatg
aggtgcgagcagtgtcttttaaataagtctgatggctctgcaagtttttctcaaggagac
acacaagtaattgcagcagcgtatggtccagcagaagtgagattaagtagagaaatcata
gataaagcaaccttggaagttgtttttcgaccaaaagttggtgttccaggttgtgctgag
aaattgaaagaacgagtgatcaggaacagctgtgagcctgttgtcctcataatgcagcat
ccaagatcgtcgcttatgattgtgattcagttaattcaagattgtggatcattactttct
tgtgcaatcaatgctgcttgcatggcaatggtggatggaggttttccaatgaagtgtctt
gtttgtgctgtgacttgttgtttgacggaatttggagagatccatttggatcctaccttg
gaacaagagaagtgtgcttcagctgttatgacgtttgcatttgatagcatcgaccaaaat
gtgatgacctcatcaacaagtgggaaatttacatttcaacagtatgacaagtgcctggaa
gcatgccgtagtgctgcaatcaagctgtttgattttttcaggttgtctgtagagagaaag
ctttcaaaggatgcaaagttcatggatctaaatattgcttaa
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