Aeromonas dhakensis: CK627_00330
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Entry
CK627_00330 CDS
T05186
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
adh
Aeromonas dhakensis
Brite
KEGG Orthology (KO) [BR:
adh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adh03009
]
CK627_00330
Enzymes [BR:
adh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CK627_00330
Ribosome biogenesis [BR:
adh03009
]
Prokaryotic type
rRNA helicases
CK627_00330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
ASX09353
LinkDB
All DBs
Position
complement(52431..53654)
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AA seq
407 aa
AA seq
DB search
MSQSFDDFDLNPALNRALAEMGFTRPTTIQQMVLEPALDGRDILASAPTGTGKTAAFLLP
ALQHLLDFPRRKPGPCRMLVLTPTRELALQVTAHAKALAAHTNLSIETIIGGVSHEEQLP
ALTKTTDIVVATPGRLLEYIEKEEFESHDIEVLVLDEADRMLDMGFIKDVNRIVEEARYR
KHTMLFSATLEGAGLEKFASEILKEPVELHAEPPRSERRPITQWVHLADDAAHKLALLVH
ILKNPETQKAIIFVKTRERLAELSGQLQAAGVPCAWIRGEMEQAKRIESIRKFHEGEVPF
LIATDVAARGIDLPNVSHVINYDMPYGADVYVHRIGRTGRAGNRGCAISLVEAHDMAMVA
KIERYTEERLKRRVIDELRPKHKEARVPVKKKKPKDDKKKSAKKKKK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtcctttgatgatttcgacctgaatccagccctcaaccgggccttggccgag
atgggtttcacccgccccaccaccatccagcagatggtgctggagccagccctggacggc
cgcgatattctggcatccgccccgaccggcaccggcaagaccgccgccttcctgttgccg
gcgctccagcatctgctggacttcccgcgccgcaagccgggcccctgccgcatgctggtg
ctgaccccgacccgcgagctggcgctgcaggtgaccgctcacgccaaggcgctggctgcc
cacaccaatctcagcatcgagaccatcattggcggcgtcagccacgaagagcagctgccg
gccctgaccaagaccaccgacatcgtggtggccaccccgggtcgtctgctcgagtacatc
gagaaagaggagttcgagagccacgacatcgaggtgctggtgctggatgaagcggatcgc
atgctggacatgggcttcatcaaggacgtgaaccgcatcgtcgaagaggcgcgctatcgc
aagcacaccatgctcttctctgccaccctggaaggggcaggcctcgagaagttcgccagc
gagatcctcaaggagccggtggagctgcacgccgagccgccgcgcagcgagcgtcgcccg
atcacccagtgggttcacctggccgacgacgctgcccacaagctggccctgctggtgcac
atcctgaagaacccggaaacccagaaagccatcatcttcgtcaagacccgcgagcggctg
gcggagctctccggccagctgcaggcggcgggcgtgccctgcgcctggatccgtggcgag
atggagcaggccaagcgcatcgagtcgatccgcaagttccatgaaggggaggtgcccttc
cttatcgccaccgacgtggccgcccgcggcatcgacctgccgaatgtcagccacgtcatc
aactacgacatgccttacggcgccgatgtttacgttcaccgtatcggccgtaccggccgt
gccggcaaccgcggttgtgccatcagcctggtggaggcccacgacatggccatggtggcc
aagatcgaacgctacaccgaagagcgcctcaagcgtcgggtgatcgacgagctgcgtccc
aagcacaaggaggcgcgggtgccggtgaagaagaaaaagccgaaggacgacaagaagaag
tctgcaaagaagaaaaagaagtaa
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