Aeromonas dhakensis: CK627_09480
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Entry
CK627_09480 CDS
T05186
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
adh
Aeromonas dhakensis
Pathway
adh03030
DNA replication
adh03430
Mismatch repair
adh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CK627_09480 (holA)
03430 Mismatch repair
CK627_09480 (holA)
03440 Homologous recombination
CK627_09480 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adh03032
]
CK627_09480 (holA)
03400 DNA repair and recombination proteins [BR:
adh03400
]
CK627_09480 (holA)
Enzymes [BR:
adh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CK627_09480 (holA)
DNA replication proteins [BR:
adh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CK627_09480 (holA)
DNA repair and recombination proteins [BR:
adh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CK627_09480 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
ASX10996
LinkDB
All DBs
Position
complement(1932934..1933965)
Genome browser
AA seq
343 aa
AA seq
DB search
MRVYPEQFADHLKAGLKPCYLIFGDEPLLKLEAIDAVRQVARKQGFDERHSFVVEQGLDW
NQVYDACQAMSLFSARQIIELELPAKVDKELAARISEIGKQLHPDLLLVLSGNRLNQTQM
KAAWFDKLSQSGTYVPVNHPEPRFFPRWMSARFQRFGLKALPDAVNFMCHSYEGNLLAAS
QEIEKLTLLSPPQPISVAYLQETIIRHAHFTPFQLIDTLLEGKVNRAQRILLALRAEGTE
PGMLAWTLCRELEQLTELALAARAGQPLVEHFSRLRIWQSRQQLIQQALTRLPFAKLQQL
WQLMARLDDAQRRFDTEQAWLMLQTIALGFRDGTPLPLAGSDA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagagtctatcccgagcagtttgcggatcatctcaaggcagggctcaagccctgctat
ctcatttttggggacgagcctttgctcaagctcgaggccatcgacgccgtgcgccaggtg
gcgcgcaaacagggcttcgatgagcgccacagcttcgtggtggaacaggggctggactgg
aatcaggtctacgatgcctgccaggccatgagcctgttctcggcccgccagatcatcgag
ctggagctgccggccaaggtcgacaaggagttggccgcccgcatcagcgagatcggcaag
cagctccaccccgacctgctgctggtactgagcggcaatcgtctcaaccagacccagatg
aaggcagcctggttcgacaagctgagccagagcggcacctatgtgccggtcaaccacccc
gagccccgcttcttcccgcgctggatgagcgcccgctttcagcgcttcggcctcaaggcg
ctgccggatgcggtcaacttcatgtgccactcctacgagggcaacctgctggccgccagc
caggagatagagaagctgaccctgctctcgccgccccagcccatcagcgtcgcctatctg
caggagaccatcatccgccacgcccacttcaccccgttccagctcatcgacaccctgctg
gaagggaaggtgaaccgggcccagcgcatcctgctggccctgcgcgccgagggcaccgag
ccaggcatgctggcctggaccctgtgccgcgagctggagcagctcaccgagctggcactg
gcggccagggccggtcagcccctggtggagcatttcagccgcctgcgcatctggcagagc
cgccagcagcttattcagcaggcgctgacccggctccccttcgccaaactgcagcagttg
tggcagctgatggcccgcctcgacgacgcccagcgtcgcttcgataccgagcaggcctgg
ctgatgctgcaaaccatcgccctcggttttcgcgatggcacccccttgccgctggcggga
tctgacgcatga
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