Alicycliphilus denitrificans K601: Alide2_0269
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Entry
Alide2_0269 CDS
T01463
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
adk
Alicycliphilus denitrificans K601
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
XylR_N
Sigma54_activ_2
V4R
HTH_8
AAA_5
Mg_chelatase
AAA_16
HTH_1
AAA_2
AAA
HTH_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEB82697
UniProt:
F4GEI2
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Position
complement(299146..300852)
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AA seq
568 aa
AA seq
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MPTLPALPSDADLRRQIQFSAADGRIWLAGQRMVLMHAASLGILRRELIHTLGPAATRRL
LLRVGYASGERDAALARQLRPGADAFAMFSVGPQLHMLQGAVQVTPEKLELDAATGHFHG
IFAWQQSWEVEVHVRDFGPQNVPVCWMLLGYASGYTSAFMGRTVLYKEVQCAASGHAHCR
IEGRPVQDWPDGAQLAADYAPDALLDDGAPQNGPRALPAWPAPMPAEDRPEPPADALGPL
IGRSAGFTAATRLLRKAAGTQVTVLLTGETGVGKERFARALHALSPRAAKPFVAVNCAAL
PGNLVESELFGTEKGAYTGADAARAGRFERAHGGTLFLDELGELPLSAQAKLLRVLQDGQ
VERLGATQPRQVDVRLVAATHVDLQDAVRAGRFRQDLYYRLNVYPIRIPPLRERQDDIEP
FARHLLQRFAALHDKHIGGLTDRALHALRQYAWPGNVREMENLIERGVILADPGQPVDAA
HLFPDSAPAAAPAHTLQASGRLGEARAPACDAALIDRLLGERLDLQALETHLIEAAVERS
HGNLAAAARLLGLTRPQLSYRLNKVRDI
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccttcccgcgctgccctccgacgccgacctgcggcgccagatccagttctcg
gcagccgacgggcgcatctggctggcgggccagcgcatggtgctgatgcacgccgcgtcg
ctgggcatactgcgccgcgagctgatacacacgctcggccccgccgccacgcgccgtctg
ctgctgcgcgtgggctacgcctcgggcgagcgcgacgcggcgctggcgcgccagctgcgc
cccggcgccgacgccttcgccatgttcagcgtgggcccgcagctgcacatgctgcagggg
gccgtgcaggtcacccccgaaaagctggagctggacgcggcgaccggccacttccacggc
atctttgcctggcaacagtcgtgggaggtggaagtccacgtgcgcgacttcggcccgcag
aacgtccccgtgtgctggatgctgctgggctacgcctcgggctacaccagtgccttcatg
ggccgcaccgtgctctacaaggaggtgcagtgcgccgccagcggccacgcgcactgccgc
atcgagggccgcccggtgcaggactggcccgacggcgcgcagctggccgccgactacgcg
cccgacgcgctgctggacgacggcgcgccccagaacggcccgcgcgccctgcccgcctgg
cccgcgcccatgcccgccgaggaccggcccgagccgcccgccgacgcgctgggcccgctg
atcgggcgctcggccggcttcaccgccgccacgcggctgctgcgcaaggccgcgggcacg
caggtcacggtgctgctcacgggcgagaccggcgtgggcaaggagcgcttcgcgcgcgcc
ctgcacgctttaagcccgcgcgcggccaagcctttcgtggcggtgaactgcgcggcgctg
ccgggcaacctggtcgagtccgagctcttcggcaccgagaagggcgcctataccggcgcc
gacgcggcgcgcgccgggcgcttcgagcgcgcgcacggcggtacgctgttcctcgacgag
ctgggcgaactgccgctgtccgcgcaggccaagctgctgcgcgtgctgcaggacgggcag
gtcgagcgcctgggcgccacccagccgcgccaggtggacgtgcgcctggtggccgccacg
cacgtggacctgcaggacgcggtgcgcgccgggcgcttccgccaggacctgtactaccgc
ctgaacgtctaccccatccgcatcccgccgctgcgcgagcgccaggacgacatcgagccc
ttcgcgcggcacctgctgcagcgcttcgcggcgctgcacgataagcacatcggcggcctc
acggaccgcgcgctgcacgcgctgcgccagtacgcctggccggggaacgtgcgcgagatg
gagaacctgatcgagcgcggcgtgatcctggccgacccgggccagcccgtggacgcggcg
cacctctttcccgacagcgccccggcggccgcgcccgcgcacacgctgcaggcctcgggc
cgcctgggcgaggcccgtgccccggcctgcgacgcggcgctgatcgaccgcctgctgggc
gagcgcctggacctgcaggcgctggagacccacttgatcgaggccgccgtggaacgcagc
cacggcaacctggcggcggccgcgcgcctgctgggcctgacgcgcccgcagctgagctac
cggctgaacaaggtacgggatatctga
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