Auricularia subglabra: AURDEDRAFT_102714
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Entry
AURDEDRAFT_102714 CDS
T03129
Name
(GenBank) Sm-like ribonucleo protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
adl
Auricularia subglabra
Pathway
adl03018
RNA degradation
adl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURDEDRAFT_102714
09123 Folding, sorting and degradation
03018 RNA degradation
AURDEDRAFT_102714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_102714
03041 Spliceosome [BR:
adl03041
]
AURDEDRAFT_102714
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AURDEDRAFT_102714
mRNA degradation factors
5'-3' decay
Lsm complex
AURDEDRAFT_102714
Spliceosome [BR:
adl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
AURDEDRAFT_102714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-ProteinID:
EJD46888
JGI:
102714
LinkDB
All DBs
AA seq
136 aa
AA seq
DB search
MLPLSLLNAAQSKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSAEGDRFWKLKECY
IRGSTIKYLRVPDQLLDTVKQEQTRAREAGRGARGGGPVQRGGRGGMPPRGGFGGRGGGM
RGGPPRGRGGPRGRGL
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgttaccattatcactgctgaatgcagcccagagcaagcctatgcttgtcgagctgaag
aacggcgagacattcaacgggcacctcgtcaactgcgacaacttcatgaacatcacgctg
cgcgaggtgtaccagacgagcgccgagggcgaccgcttctggaagctcaaggagtgctac
atccgcggcagcaccatcaagtacctgcgcgtgcccgaccagctcctcgacacggtcaag
caggagcagacacgcgcgcgtgaggccgggcgcggggcacgcggtggcggcccggtgcaa
cgcgggggacggggaggtatgccgccaagaggaggttttggcgggcgcggcggtggcatg
cgcggcggccctccgcgcggccgtggtggccctcgagggcgcggcttgtag
DBGET
integrated database retrieval system