KEGG   Auricularia subglabra: AURDEDRAFT_102714
Entry
AURDEDRAFT_102714 CDS       T03129                                 
Name
(GenBank) Sm-like ribonucleo protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
adl  Auricularia subglabra
Pathway
adl03018  RNA degradation
adl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AURDEDRAFT_102714
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AURDEDRAFT_102714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adl03019]
    AURDEDRAFT_102714
   03041 Spliceosome [BR:adl03041]
    AURDEDRAFT_102714
Messenger RNA biogenesis [BR:adl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     AURDEDRAFT_102714
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     AURDEDRAFT_102714
Spliceosome [BR:adl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    AURDEDRAFT_102714
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-ProteinID: EJD46888
JGI: 102714
LinkDB
AA seq 136 aa
MLPLSLLNAAQSKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSAEGDRFWKLKECY
IRGSTIKYLRVPDQLLDTVKQEQTRAREAGRGARGGGPVQRGGRGGMPPRGGFGGRGGGM
RGGPPRGRGGPRGRGL
NT seq 411 nt   +upstreamnt  +downstreamnt
atgttaccattatcactgctgaatgcagcccagagcaagcctatgcttgtcgagctgaag
aacggcgagacattcaacgggcacctcgtcaactgcgacaacttcatgaacatcacgctg
cgcgaggtgtaccagacgagcgccgagggcgaccgcttctggaagctcaaggagtgctac
atccgcggcagcaccatcaagtacctgcgcgtgcccgaccagctcctcgacacggtcaag
caggagcagacacgcgcgcgtgaggccgggcgcggggcacgcggtggcggcccggtgcaa
cgcgggggacggggaggtatgccgccaagaggaggttttggcgggcgcggcggtggcatg
cgcggcggccctccgcgcggccgtggtggccctcgagggcgcggcttgtag

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