Auricularia subglabra: AURDEDRAFT_114526
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Entry
AURDEDRAFT_114526 CDS
T03129
Name
(GenBank) DEAD-domain-containing protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_114526
03041 Spliceosome [BR:
adl03041
]
AURDEDRAFT_114526
03036 Chromosome and associated proteins [BR:
adl03036
]
AURDEDRAFT_114526
Enzymes [BR:
adl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AURDEDRAFT_114526
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
AURDEDRAFT_114526
mRNA cycle factors
Common to processing body (P body) and stress granule
AURDEDRAFT_114526
Spliceosome [BR:
adl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
AURDEDRAFT_114526
Chromosome and associated proteins [BR:
adl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
AURDEDRAFT_114526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
UTP25
Motif
Other DBs
NCBI-ProteinID:
EJD43720
JGI:
114526
LinkDB
All DBs
AA seq
650 aa
AA seq
DB search
MSNGIVNGASGVEDKFASLAISGRSYVPPHLRNAQRAASSAGPPGGGGGGAGRGGGWQDS
GPPRNNSFGGAFGGGNRSSSYSGGGGGGGGGGGGWSDSGPPRGGRGGGNWDNGSSERSGF
GQGGWKDGKHVVGARNQRLEKELYGEPNDPAKQQTGINFEKYDDIPVEATGAGVPEPVTQ
FTNPPLDGVLLENIAFAHYSTPTPVQKHSIPIVAGGRDLMACAQTGSGKTAGFLFPILSA
LFSSGPSKIPVDNSNSYSRSRKAYPSVLILAPTRELVSQIHDEARKFAYRSWVKPALVYG
GADINQQLRLIERGCDLLSATPGRLVDLIERGRISLANIRYLVLDEADRMLDMGFEPQIR
RIVQGEDMPGVQERQTLMFSATFPRDIQILAKDFLKEYIFLSVGRVGSTSENITQKIEYV
EDNEKRSILLDILHAEGKNGLTLIFVETKRMADILSDFLYANQFPATSIHGDRSQRERES
ALATFRQGRTPIMVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGIAT
AFFNRGNKNIIRDLVDLLREANQEVPAWLDGMMHESSYGGGGYRGRGRGGGRGRGNASRD
YRQGGGGGGGGRFAGTGSGSGGGGFGGGYSSGPAYGGSGGGGGGGGGSWW
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatggcattgtaaacggagcctccggtgttgaagacaagttcgcatccctcgct
atcagcggcaggagctacgttccgccccatcttcgcaacgcgcagcgcgcagcatcgtcc
gcaggccccccaggaggcggcggcggcggcgccggccggggcggcggctggcaggactca
ggcccgccgcgcaacaacagctttggcggcgcattcggcggcggcaaccgctcctcgtcc
tactcgggcggcggcggcggcggcggaggaggaggcggcggctggtccgacagcggcccc
ccgcgcggcgggcgcggcggcggcaactgggacaacggctcctccgagcgctcgggcttc
ggccagggcggctggaaagacggcaagcacgtcgtcggcgcccgcaaccagcgcctcgag
aaggagctctacggcgagcccaacgaccccgcaaagcagcagaccggcatcaatttcgaa
aagtacgacgacatccccgtcgaggccaccggcgctggcgtcccagagcccgtcacccag
ttcacgaacccgcccctcgacggcgttctcctcgagaacatcgcctttgcgcattactcg
acgcccaccccggttcagaagcactccatccccattgtggccggcggacgtgacctcatg
gcatgtgcgcagaccggctccggtaagaccgcgggattcctgttcccgattctctccgcc
ctgttctcgtcagggccctcgaagattcctgtcgacaactccaacagctactcgcgctct
cgcaaggcgtacccgagcgtcctcattcttgcgcccactcgcgagctcgtcagtcagatt
cacgacgaggcccgcaagttcgcgtaccgctcctgggtcaagcccgcgctcgtctacggc
ggtgccgacatcaaccagcagctccgtctgattgagcgcggctgtgacctgctcagcgcc
acgccgggtcgtcttgttgatctcattgagcgcggccgcatcagcctcgccaacatccgc
taccttgtgcttgacgaggctgaccgcatgttggacatgggtttcgagccgcagatccgt
cgcatcgtccagggcgaggacatgcctggcgtccaggagcgccagacgctcatgttcagc
gcgacgttcccgcgcgatatccagatactcgctaaggacttcttgaaggagtacatcttc
ctctccgtcggccgtgtgggctctacgtcggagaacatcacgcagaagatcgagtacgtc
gaggacaacgagaagcgctccatcttgctcgacatcttgcacgctgagggcaagaatggg
ctgacgctcatcttcgtcgagacgaagcgcatggccgacatcctgtcggacttcctttac
gccaaccagttcccggccacctcgattcacggtgaccgctcgcagcgcgagcgcgagagc
gctcttgcgacgttccgccagggccgcacgcccatcatggtcgctaccgccgtcgctgct
cgtggccttgatatccccaacgtgacgcacgtcatcaactacgatctgccgtccgacatt
gatgactatgtccatcgcattggtcgtactggccgcgcgggcaacaccggtatcgcaact
gcgttctttaaccgcggcaacaagaacatcatccgcgacctcgtcgacctcctccgtgag
gccaaccaggaggtccccgcctggcttgacggcatgatgcacgagtcgtcctacggcggt
ggcggctaccgtggccgcggtcgcggcggaggccgtggccgtggaaatgccagccgtgac
taccgccagggcggcggaggcggcggtggcggccgctttgctggtacgggcagcggctcc
ggcggtggaggcttcggcggtggttacagcagcggcccggcctacggcggcagcggaggc
ggcgggggcggcggcggcggctcctggtggtaa
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integrated database retrieval system
