Auricularia subglabra: AURDEDRAFT_181525
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Entry
AURDEDRAFT_181525 CDS
T03129
Name
(GenBank) hypothetical protein
KO
K14328
regulator of nonsense transcripts 3
Organism
adl
Auricularia subglabra
Pathway
adl03013
Nucleocytoplasmic transport
adl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AURDEDRAFT_181525
03015 mRNA surveillance pathway
AURDEDRAFT_181525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_181525
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
AURDEDRAFT_181525
mRNA cycle factors
P-body specific factors
AURDEDRAFT_181525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-ProteinID:
EJD51954
JGI:
181525
LinkDB
All DBs
AA seq
392 aa
AA seq
DB search
MTAGKLTIAVDRLKVVVRRLPPNLPEDVFWDSVKPWANDDTVQWRSFVAGKISKRTIKEN
VPSRAYITFKTHESVAIFSREYDGHIFRDKSGRETAAVVEFAPYQKIPPTEVKPDKYKDT
LLRDAHYTHWLDELENVKKLSEQDTLEAYKNGANEQESKPKTTPLLEALKAEKERAKEAA
LARRHALAQQEKESKKGGERKGTAKEPAVPPARVDDPAAASAPGGKSARTKRRPNPKDKK
EKEASAPKVIIAKKPADGQAGSSSPTVAPAKPAKEPGESKKKGTGTGDAEGKPERKRPQI
SGSRVLDVALSGARKEREKAAEPVATVPSLLADAAAAPARERKETPPPKSVVTAPTPGTP
GVLSINPSDAGTASPGGGRRRRVRTKRQPQAG
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggggaagctcacgattgccgttgaccggctgaaggtcgtcgtgcgccgcctg
ccgccgaacttgcccgaggacgtgttctgggacagcgtcaagccgtgggcgaacgacgac
accgtccagtggcgctcgttcgtcgctgggaagatcagcaaacggaccattaaggagaac
gttccgagtcgcgcgtacatcaccttcaagacgcacgagtctgtggctatcttcagccgc
gagtacgatggtcatatattccgcgacaagtcgggtcgcgagaccgccgccgtcgtcgag
ttcgcaccataccagaagattccaccaacagaagtgaaaccagacaagtataaagacacg
cttctcagagatgcccattacacgcattggctggacgagctcgagaatgtcaagaagctc
tccgaacaagacacactcgaggcgtacaagaacggtgcaaacgagcaagagtcgaaaccg
aagacgacaccactgctcgaagcgctgaaagcggagaaggagcgcgccaaggaggccgcc
cttgcgcgccgtcatgcccttgcccagcaggagaaggaaagcaagaagggcggcgagcgc
aaaggcaccgccaaggaacccgcagtgccgcccgcgcgtgtggacgatcccgccgccgcg
tccgcgcccggcggcaagtccgcgcgcaccaagcgccgtccgaaccccaaagacaagaag
gagaaagaggcgtccgcgccgaaggtcatcatcgcgaagaaacccgccgacggacaagcg
ggatcgagcagccccacggtcgcccctgcgaagccggccaaagagcctggcgagtccaaa
aagaagggcaccggtacaggcgacgccgagggcaagccggaacgcaagcggccgcaaatc
agcggtagtcgcgtgctcgacgttgcgctcagcggtgcgcgaaaggaacgcgagaaggcc
gccgagcccgtggccacggttcccagtctgctcgccgatgctgctgccgctcctgctcgc
gagaggaaggagacaccgcctcccaagtccgttgtcactgctcccactcctggtactcct
ggcgtcctttctatcaacccttcggatgcgggaactgcgagccctggtggtggaaggcgt
cggcgtgtccggaccaagcggcagccacaggctggctaa
DBGET
integrated database retrieval system