Auricularia subglabra: AURDEDRAFT_81942
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Entry
AURDEDRAFT_81942 CDS
T03129
Name
(GenBank) transcription factor Tfb4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
adl
Auricularia subglabra
Pathway
adl03022
Basal transcription factors
adl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AURDEDRAFT_81942
09124 Replication and repair
03420 Nucleotide excision repair
AURDEDRAFT_81942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adl03021
]
AURDEDRAFT_81942
03400 DNA repair and recombination proteins [BR:
adl03400
]
AURDEDRAFT_81942
Transcription machinery [BR:
adl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AURDEDRAFT_81942
DNA repair and recombination proteins [BR:
adl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AURDEDRAFT_81942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Rep3_C
Motif
Other DBs
NCBI-ProteinID:
EJD52362
JGI:
81942
LinkDB
All DBs
AA seq
338 aa
AA seq
DB search
MERPSHLALILDLSPTQWHLCGTAAEHPLALRDFLTQTLAFVNAHLAARDENSLVVLGAL
PGKSVLLYASNEDFSGMANVADANSYQPFKAVDTTVMKRVIDELSSLGDITEEEPTSLVG
ALTKALCHINRITHPPPPANPSESPPTPPEARILILSVSPDLSTSYIPLMNSIFSAQKLK
AIIDVCKVFGPDAVFLQQAAHLTGGSYVYLLEREALLQYLIMSFLSPPMVRSILSVPTQE
KIDFRAACFCHKNIIDVGYVCSVCLSIFCTPVAVCSTCRTKFPAKTVMRLRTSMPGGPPG
GSSAPASRASSPGPSPLRNGTSAPAPSSTGKPTPLRES
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcccgtctcacttggccctcatcctcgacctctcgccgacgcaatggcacttg
tgcggcaccgccgccgagcacccgctcgcgctacgggactttttgacgcagactctggcg
ttcgtcaacgcccacctcgcggccagagacgaaaactcgctcgtggtgttaggagcgctg
ccaggcaaaagtgtattgctgtacgcgtccaacgaggacttctctggaatggcgaatgtg
gcggatgcgaacagttaccagccgttcaaggcggttgacaccaccgtcatgaagcgtgtc
atcgacgagctctcctctctgggcgatataaccgaagaggaacctacgtcgctggtcggc
gctctcaccaaagcattatgtcacataaatcgcataacgcatccaccgccgccagcgaac
ccgtcagaatcgccgcccacgccgcccgaggcgcgaattcttatcctctccgtttcgcct
gacctgtcgacctcctacatccctcttatgaactcaatcttctccgctcagaagctaaaa
gctatcatcgatgtctgcaaagtctttggcccggacgccgttttccttcagcaggcggcc
catctgactggcggttcctacgtctaccttctcgagcgtgaagcgctgcttcagtatctc
atcatgagcttcctctcgccaccgatggtgcggtccatcctctccgtcccgacgcaggag
aagatcgacttccgcgcggcgtgcttctgccacaaaaacatcattgacgtgggctatgtc
tgctccgtgtgcctgtccatcttctgcacgcccgttgccgtttgcagcacatgccgcaca
aagttcccggccaagacggtaatgcggttacgcacctcgatgcctggcggacccccgggc
gggtcgtccgcccccgcgtcgcgtgcatccagtccggggccaagtccactgaggaatggg
acgagtgcgcccgcgccttcgtcgacgggcaagccgacgccgttacgggaatcttga
DBGET
integrated database retrieval system
