Auricularia subglabra: AURDEDRAFT_83748
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Entry
AURDEDRAFT_83748 CDS
T03129
Name
(GenBank) hypothetical protein
KO
K10706
senataxin [EC:5.6.2.-]
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adl03021
]
AURDEDRAFT_83748
Transcription machinery [BR:
adl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
AURDEDRAFT_83748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEN1_N
AAA_11
AAA_12
AAA_19
AAA_30
UvrD-helicase
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
EJD50704
JGI:
83748
LinkDB
All DBs
AA seq
2008 aa
AA seq
DB search
MAPSSQALPVPKNEAQLEQLLAEMRDSPVGLEGVSEELLRYILNAVMQTPKTGDCYHWYC
AQARPLIKEAATFALRLFAYNASKHVEALRDRLALVLDECCDCVHEFQIQKWSSRETYLG
CFNSSLLDDFFDHIDKWEAGCVLAYLRNAVGMPSTTRGKLPLASLAQPVVYHCIVNPALV
VNTDIWAMLATYCPSPVIAQWSARPIPPGLFLLLAHPNEDTRTWAAEQLRICIVLTGDHL
SKCNDYALVLSAFACAALPQHELSSGARRKTATWESSISSDDAVMWSAFVKVLDVYPASA
LCAKVTAHNRTYHAVIGHLNDGGAHYDMVLEAFATLLNKLSGDLWTREGDEYPEVVFASI
KDNPAFLQLIRESDPAGEPRFFRWLEPFVLSLWSKPSFADIVAKVVSFMCEELQHERFKR
WHPMIIGTILAVMKKSSDSKDSTHFKAVRAPFDIHAKTIVNVALTSTSANESWTSAISAA
RTLLSHVLRADIRDIDQKAQLLSQLAVKDTGISSFPALVFSKPLWQLVFRELKGKGANAM
AFIIPIVAQSAMYDELRAQSYVAPTSSAFKVAFAATRTGINEALEFVHKEFEDVIELFVE
SISSPRTLENMLNQQAIIQPMLCLLFSPSARLQNSAKTIVSQAYGVDGRSDCLRALLEKA
PEAGLKALTHINESFAGLASALAEACSLSKTLVICLTDVLDVLCARPGGLLFAKSFVYPD
GKQRPTKQIGKLWASMCRALAVVFRRTPSWSTFYENQEMVIWMRDALIYGRDLLAARATL
EGAILVADSHGDATVASPRKLSDAGKQMVGDLQTVLTEVINWLRLTDFELLYQSLNLLRA
IFECFRTIKSQPAEEPLKKLGRFLDKARQRATAGGDDTTRLSAVDLASLAEDMDSFKDDS
DDEVQIIERPIFPPTKTTGSSKKRASSPPAPEEAPARKQAKTAVSRPSVLSKTFPLDPKA
SKPAAKAIPSTSKSLAQKVATASKTGQSAKQPVGTAPPRPPAAQEEPESFIIRGFRDEGR
AAKAAAKPSKPVEVPDSSDGDDATRAALAKLETLQKSPPRERRQIKLLDEPLNAGRAWRP
ALQDRTNHKMDKQITKLRLKPDLTDLHRAILEWDYDQTGDEPPWKGRKPDPVHVPPVFRD
HEEYKRVFEPLLLYEAWAQMKQGKDEGDKVIVACELAGKSFVDSWIEVDISIKETLPQKW
YLAETDIVLLRSGADETKKTLAKVQNATSSNHGARELKATLRILEDADPGLQVGTNWQLR
KVFSLSTLNREYASLVALPYYDLSEHILQAHPAETRPYDPDEVRRTMKNQKVNEPQAKAI
LASKNAAGFLLVQGPPGTGKTWTICGMVGAFMSNRPKPATEIQAGRAAAPASKPHPKKIL
ICAPSNAGIDEVAKRLCDGVLDSSGRRVVPNVVRIGVDSSVNTSVKHLTLDYQVERKLAG
PGAPTAKNEPQVDTNALRAELASVKAALEQKFDESNKLQARQADTKAVQDQINILKSKRF
AISQKLDNARDKQKAETRALDAARRKFRTEVLLEADVICSTLAGAGHDTLETFEFETVVI
DEAAQSIELSSLIPLRYGCKRCVMVGDPQQLPPTVISKRATHFKYNQSLFVRIFERKPKA
AHLLRHVPNSSHPHLCRTQRLHHSIQYRMHPDISLIPSKLFYGGNLKDGPDMAAKTEQPW
HASELLGTYRFFNIAQGHHENAAVGLSLVNRAEVDAALALYEAFLSQYSDQDMSHRIGVI
SMYKAQINALQRAFEGRYGADIKNKLDFNTVDGFQGQEKDIIILSCVRAGPRVTDIGFVK
DVRRLNVSITRARSSLFILGHAATLERGDDTWRQIVEDARARGFLVDAEASTFRNANAVR
RNITGGPAGQPGTPAVVPKAPSAAPKNKRPAPEPPAGLMTPRKMSSKGGRSSANAGDRGR
LPTSEREPGEISEDEQPPAKRARPDASEPGQPTPGPSASANNSVPRANGVRLDGPPARHN
GQPRAPKPRPKKSAAASMFIPKKKPGPG
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccagctcccaggctctgcccgttcccaagaacgaggcgcagctagagcagctg
ctcgccgagatgcgcgattcgcccgtcgggctcgagggcgtctcggaggagctgctgcgc
tacatcctcaacgccgtcatgcagacgccgaagacgggcgactgctaccactggtactgc
gcccaggcgcgcccactcatcaaggaggcggccaccttcgcgctgcgcctgttcgcctac
aacgcctcgaaacacgtcgaggccctgcgcgaccgcctggcgcttgtgctcgacgagtgc
tgcgactgcgtgcacgagtttcagatccagaaatggtcgtccagggaaacctatctgggc
tgcttcaacagcagcctgctcgacgatttcttcgaccacatcgacaaatgggaggcgggc
tgcgtgctcgcgtacctgcgcaatgcggtcggcatgccgtctacgacgcgcgggaaattg
ccgcttgcctcgctcgcgcagcccgtcgtctatcactgcatcgtaaaccccgccctcgtt
gtcaacacagatatctgggcgatgctcgccacatactgcccgtcaccggtgatcgctcag
tggtcagcccgtcctatccctccaggattattcctgctactcgcacatccgaatgaggat
acccggacgtgggccgcggaacagctccggatatgcattgtgcttacgggtgaccatctc
tccaagtgcaatgactacgcacttgtgctctctgcgttcgcatgcgccgcccttccacag
cacgagctgagtagtggcgcgcgtcggaaaaccgctacttgggagtcctcgatcagttcc
gacgacgcggtcatgtggtctgcattcgtgaaggtgctcgatgtgtatccggcatctgca
ctgtgtgcgaaagttactgctcataaccgaacataccatgcggtcattgggcatctgaac
gatggcggcgcgcactacgacatggtcctggaggcgttcgccacgctcctgaacaagctc
tcgggcgatctctggacgcgggaaggcgatgagtatcccgaagttgtcttcgcgtcgatc
aaggataatcccgcattcctccaactcatcagagagagcgacccggcgggcgaaccgcgt
tttttccgatggctcgaacctttcgtactgtctttatggagcaaacccagctttgccgac
atagtggcgaaagtggtcagcttcatgtgcgaggagctccagcacgaacgcttcaagcgg
tggcatccgatgataatcggtactattttggcagtcatgaagaagtccagcgactccaag
gattccacacatttcaaggccgtgcgcgcacccttcgacatccacgcgaagacgatagtc
aacgtggcgctcacgtcgacgtcggcaaacgagtcctggacctccgccatctcagctgct
cgcacgcttctatcgcatgtgctccgcgcagacatccgggacatcgaccagaaggcacag
ctgctttctcagctcgcagtcaaggacaccggtatatccagctttcctgcgctggttttc
agcaagccgctgtggcagttggtcttccgcgagctcaagggcaagggcgcgaatgctatg
gcattcatcatccccatcgtcgcccagagcgccatgtacgacgagctacgcgcgcagtcc
tacgtagcgccgacatctagcgcctttaaagtagccttcgcggccacgcggactggcatc
aacgaggcgctggagtttgtgcacaaggagttcgaggatgtgatcgagctcttcgtcgag
agcatctcgagcccgcgcacgctggaaaacatgctcaaccaacaagccatcatccagcct
atgctctgcctcctcttctcgccgtccgcgcgcctgcagaattctgccaagacaatcgta
tcgcaggcgtatggcgtcgacggccgcagcgactgccttcgcgcgctgctggagaaggcc
cccgaagccggcctcaaggcgctaacgcacatcaacgagtcctttgccggcctggcttcc
gctttggcggaggcgtgcagcctgtctaagacactcgtgatctgcctgacggacgtgctg
gacgtactctgtgcacggcccggcgggctgctcttcgccaagtcgttcgtgtacccagac
gggaagcagcgtccgacgaagcagatcggcaagctgtgggcatcgatgtgccgcgcgctc
gcagtcgtgttccgccgcacgcccagctggtcgacgttctacgaaaaccaggagatggtc
atctggatgcgcgacgcgctcatctacgggcgcgatctgctcgcggctcgcgcgacgctc
gagggtgccatcctcgtcgccgactcgcacggcgacgctacggtggcgtcgccgcgcaag
ctgtctgatgcaggcaagcagatggtcggcgacctccagaccgtcctcaccgaggtcatc
aactggctgcgcctaacggatttcgagctcttgtatcaaagcttgaacctgctccgcgcc
atcttcgagtgcttccgcacgatcaagtcgcagcctgcagaggagccgctcaagaaactc
ggccgcttcctcgacaaggcgcgccagcgggctacggcgggcggcgacgatacgacgcgc
ttgtcggccgtggacctggcgtcgctagctgaagacatggattcgttcaaggatgactct
gacgacgaggtccagatcatcgagcgtccgatcttcccgcctaccaagacgacgggcagc
agcaagaagcgggcttcctcgccgcctgcgcctgaggaggcgcccgcgcgcaagcaggcc
aagaccgctgtatctcgtccctcagttctctccaagactttccccctggacccgaaggct
tccaagcctgccgcaaaggccattccatcgacgtccaagtctctcgcacagaaagtggcg
acagcatcgaaaacgggacaatcggcgaaacaacccgttggcactgcgccgccgcgacct
cccgctgcgcaagaggaacccgagtcattcataattcgcggcttccgggacgaaggccgt
gcagcaaaggcagctgcgaaaccgagcaagcctgtcgaagtgcctgacagctcagatggt
gacgatgccacccgggcggcgctggcgaaactggagacgctccagaaatcgcctcccaga
gagcggcggcagatcaagctactggatgagcctcttaatgccgggcgcgcgtggcggcct
gcgctgcaggaccggacgaaccacaagatggacaagcagatcaccaagctgcggcttaaa
cccgacctcacggacctccaccgcgccatcctcgagtgggactacgaccaaaccggcgac
gagccgccgtggaagggcaggaaaccagacccggtccatgtcccaccggtgttcagggat
cacgaggagtacaagcgcgtctttgagccgctcctactgtacgaagcctgggctcagatg
aagcagggcaaggacgagggcgacaaggtcatcgtcgcctgcgagcttgcgggcaagagc
ttcgtcgactcgtggatcgaggtcgacatctcgatcaaggagaccttgccgcagaagtgg
tacctcgcggaaaccgatatcgttctgcttcgcagtggcgcggacgaaacgaagaagact
ctcgccaaggttcagaacgcgacttcgtcgaaccacggcgcgcgcgagctcaaggcaacg
ttgcgcatcctcgaggacgcagatcctggcctacaggtcggcacaaactggcagctgcgc
aaggtgttcagcttgagcacgctcaatcgagaatatgcctcgcttgtcgcccttccgtat
tacgacttgtccgagcacatcctgcaggctcaccctgcagagacgcgtccctatgaccca
gacgaggtccgacgcacgatgaagaaccagaaggtcaacgagccgcaggcgaaagccatt
ctcgcctctaagaacgcggctgggtttctgctggtccaaggtccgcctggtactggtaag
acctggactatctgtggcatggtcggcgccttcatgtccaatcgaccgaagccggcgact
gaaattcaagcgggacgagccgccgcgccggcttcgaaaccacatcccaagaagattctt
atctgcgcgcctagcaacgccggtatcgatgaggtcgccaaacgtttgtgtgacggcgtt
ctcgattccagtggtcgccgcgtcgtgcccaatgtcgtccgcatcggcgtagacagtagc
gtcaacactagcgtcaaacatctgactctcgattaccaggtcgagcggaagcttgctggc
cctggagcgcccaccgccaagaacgagccccaggtcgataccaacgctctgcgcgccgag
ctcgcctcggtcaaggcggctttggagcagaaattcgacgagagtaacaaactgcaagct
cgtcaagccgacaccaaggccgtccaggaccagatcaatattctgaaaagcaaacgcttc
gcgatttcacagaagctcgacaatgcccgcgataagcagaaggcggaaacaagagccctg
gatgctgcacgaaggaaattccgcactgaagttcttctcgaagcggacgtcatctgtagt
accctcgccggagcaggccacgacacgcttgaaactttcgaattcgaaacggtcgttatc
gacgaggctgcgcagtctatagagcttagctccttgattccactcagatatggctgcaag
cgctgtgtcatggttggtgacccccagcaactgcctcctaccgtcatctccaaacgtgca
acccacttcaaatacaatcaatcgttattcgtccgcatattcgagcgcaagccaaaggct
gcgcatctattgaggcatgttcccaattcgtcccaccctcatttatgtcgaactcaacga
ctccaccacagtatccagtaccgtatgcatcccgacatcagcctcatccccagcaagttg
ttctacggtggcaatctcaaagatggcccggatatggccgcgaagaccgagcagccatgg
cacgcgtcagagctgctcggaacatacagattcttcaacatcgcacaaggtcaccacgag
aacgcagcggtgggactctccttggtcaaccgtgccgaagtcgatgccgctttggctctg
tacgaggccttccttagccagtacagcgaccaggacatgagccaccgcatcggcgtcatt
tccatgtacaaggctcagatcaacgcattgcaaagagcattcgagggccgttatggtgcg
gatatcaagaacaaattagacttcaacacggtcgatggcttccagggccaggagaaagac
atcatcattctttcctgtgtccgtgcgggaccacgcgtcactgacatcggtttcgtcaag
gatgttcgacgactcaacgtatccattacgcgtgctcgttcatccttgttcatcctcggg
cacgcggcgacgttggaacggggtgatgacacctggagacagattgtggaggacgcccga
gcgcgcggtttcctggtcgacgccgaagcgagcacattcagaaatgcgaatgctgtccgc
cgaaacataacgggaggaccagcgggccagcctgggacacccgcggttgtacccaaagcg
ccttctgctgcgccgaagaacaaaaggccagcgcccgaacctcctgcgggactcatgacg
ccacggaagatgtcgagcaagggaggccgatcttccgctaatgccggtgaccgtggacgc
ctccctactagcgagcgcgagccgggtgagatatcggaagacgagcaaccaccggcgaag
cgagcccgtccggatgcctctgagccaggtcagcccacaccggggccttctgcgagcgcc
aacaattctgtacctcgcgctaacggcgtgcgcctcgacggtccgccggctcgtcacaat
ggtcagccgcgagccccaaagccgcgacccaaaaagtctgctgcagcttcaatgttcata
ccgaagaagaaaccgggtccaggatag
DBGET
integrated database retrieval system