Auricularia subglabra: AURDEDRAFT_87442
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Entry
AURDEDRAFT_87442 CDS
T03129
Name
(GenBank) WD40 repeat-like protein
KO
K15542
polyadenylation factor subunit 2
Organism
adl
Auricularia subglabra
Pathway
adl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AURDEDRAFT_87442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_87442
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
AURDEDRAFT_87442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
PROPPIN
NBCH_WD40
IKI3
Motif
Other DBs
NCBI-ProteinID:
EJD46225
JGI:
87442
LinkDB
All DBs
AA seq
568 aa
AA seq
DB search
MANSGPAAVPLLLPQAFIPGPRPENEWEPKRYLDEPTPPPVDVDKLRELELAAQRQLLDG
KALKKTRPRRTVDYGGGLSRWALLNKTRPSPRFMPYLRPAASYIIDLFPPKAYGDNASTS
LCTKFVHTSTNKIRCPVNCVTWTPEGRRVLTGSTSGEFTLWNGLTFNFETILQAHDTAVR
AFQFNHAGTYLASADQSGIIKYFQPNMNNLTAWQGHREAIRGLSFSPDDAKFATCSDDST
IRIWSFVESREERVLTGHGWDVKCVEWHPTKGLLASGSKDNLIKFWDPRSSTVLTTLHDH
KNTVQALAWNPAGDLLASASRDQTVRIFDIRAMKEYALLKGHKKEACSVTWHPLHPLLVT
GGSEGAILHWDLSSPPADPVMQSVAPRAALNQAHDMNVWALTFHPLGHILVSASNDHTTR
FWSRERPGDPTSNFSAGGQKPPEVAQEDDGDDGAVPGFTAWDEQQGGPSGMGEDGIPGFG
GGPPPTAPQMQMIPPPRQMPPPRQMNGHGDVDEFGRERRDSDRQEERRDWNRGAPPGSSR
GGRGNWGGGGQDRWRDGGGGGGGRYDRY
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggctaattccggtcctgccgccgttccattactgctgcctcaggctttcatacctggt
ccgcgacctgagaacgaatgggaacccaagcggtatttggatgagcctacacccccgccc
gtggatgtcgacaagcttcgagagctcgaattggcagctcagagacaattgctggacgga
aaagccctcaagaaaacgcgccctcgaagaacggtcgattatggtggcggactcagccgt
tgggcattgttgaataagacacggccaagtccccgattcatgccatatctcagacctgca
gcatcctatatcatagacttatttccaccgaaagcctatggtgacaacgcttcgacttca
ttatgtaccaagttcgtgcatacctcgacgaacaagattcggtgtccggtcaactgtgtc
acgtggacgccagaagggcggcgtgtgcttacaggttcaacgagcggcgagttcacgctc
tggaacggcttgacgttcaacttcgagacgattctgcaggcgcacgacacggccgtgcgc
gccttccagttcaaccatgccgggacctacctcgccagcgcggaccagagcggcataatc
aagtacttccagccgaacatgaacaacttgacggcatggcaagggcaccgcgaggctatc
cgcggcctcagcttcagcccagacgacgccaagttcgctacgtgcagtgatgactcgacg
atacgaatatggtcgttcgtagagagccgcgaagagcgcgttttgaccggtcacggatgg
gacgtcaagtgcgtcgagtggcatccgaccaaaggccttttagcgtcaggaagtaaagac
aacctcatcaagttctgggacccgcgctcctcaaccgtacttacgacattgcacgaccac
aaaaatacagtgcaggcactggcctggaatcctgcgggcgacctgctggcttcggcatcg
cgcgaccagacggtgcgcatcttcgacatccgcgcgatgaaagaatacgcgctgctcaag
gggcacaagaaggaggcgtgcagcgtcacctggcacccgctgcacccactgctcgtcacg
ggcggctcggagggcgcgatcctgcactgggacctgtcgtcgccgccggcggacccggtg
atgcagtcggtggccccgcgcgcggcgctcaaccaggcgcacgacatgaacgtgtgggcg
ctgacgttccacccgctcgggcacatcctcgtttcggcctcgaacgaccacacgacgcgc
ttctggagccgcgagcggccgggcgacccgacgagcaacttctctgccggcggccagaag
ccgcccgaggtcgcgcaggaggacgatggcgacgacggcgccgtgccgggctttaccgcg
tgggacgagcagcagggcgggccgtctggcatgggcgaggacggcattcctggattcggg
ggtgggccgccgccaactgcgccgcaaatgcagatgatccccccaccgcgccagatgcca
ccgccgcgccagatgaacggacatggcgacgttgacgagtttggtcgcgagcggagggac
agcgacaggcaggaggaacgcagagattggaaccgcggcgcccccccgggaagtagtcgc
ggcggtcgtggcaactggggcggtggtgggcaggaccgctggcgggacggcggcggcggc
ggtggtgggcgatatgatcgatattga
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