Aeromonas sp. CU5: CK911_17765
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Entry
CK911_17765 CDS
T05327
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aem
Aeromonas sp. CU5
Pathway
aem03420
Nucleotide excision repair
aem03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CK911_17765
03430 Mismatch repair
CK911_17765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aem03400
]
CK911_17765
Enzymes [BR:
aem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CK911_17765
DNA repair and recombination proteins [BR:
aem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CK911_17765
MMR (mismatch excision repair)
Other MMR factors
CK911_17765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
PhoH
Motif
Other DBs
NCBI-ProteinID:
ATL94440
UniProt:
A0A291TN35
LinkDB
All DBs
Position
complement(3943115..3945286)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSTLLDGLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMQVERCSPFSIIAV
TFTNKAAAEMRGRVEKVIGDGVRGMWIGTFHGIAHRLLRAHHLDAGLPQDFQILDSDDQY
RLIRRVIKALNLDEKHWAPRAVMSYINGKKDEGLRPGDIDLYGDPVTRTYQKIYQTYQET
CDRSGLVDFAELLLRAHELWLNRPHILEHYRDRFQNILVDEFQDTNGIQYAWLRMLAGNS
GKVMIVGDDDQSIYGWRGAKIENIQRFLTDYQGAETIRLEQNYRSTANILKAANSVIANN
SDRLGKELWTEGAEGDPISLYAAFNEVDEARFAVGRLKDWKEKGGLLADCAILYRSNAQS
RVLEEALMQDAMPYRIYGGLRFFERQEIKDAMAYLRLINNRGDDASFERVVNTPTRGIGD
RTLEILRGNARDQGLNLWQSAKGLLNDKVLTGRAGNAVRGFVDLIDALEELVGLLPLHQQ
ADIAIQNSGLKAMYLAEKGEKSQARVENLDELVTACRQYKRPDELEDMSDLSAFLAHAAL
ESGESQADEYADAVQLMTLHSAKGLEFPLVLLVGVEEGMFPSPQSTEESGRLEEERRLCY
VGMTRAMEKLYICYAESRRIYGREMQHSVSRFIREIPAECLEEIRLRTQVSRPTQYGRFS
QNEVQQSFDASGIKLGQRVLHPKFGEGVVLNFEGVGQQSRVQIQFDEVGAKWLVTAYARL
EAL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcaaccctgctcgacgggctcaacgacaaacaaagagatgccgttgcggcc
cctcgtagcaatctgctggtgctggccggtgccggttcgggcaagacccgggtgctggtg
caccgcattgcctggctgatgcaggtggaacgctgttcacccttctccatcatcgcggtg
acctttaccaacaaggctgcggcagagatgcgtggccgggtcgagaaagtgatcggcgac
ggcgtgcgcggcatgtggatcggcaccttccacggcatcgcccaccgtttgctgcgggcc
caccatctggatgcggggctaccgcaggatttccagatcctcgactccgacgaccagtac
cggctgatccgccgcgtcatcaaggcgctcaacctcgatgagaagcactgggccccgcgc
gccgtgatgagctacatcaacggcaagaaggacgagggtttgcgccccggcgacatcgat
ctttacggcgaccccgtcacccgcacctatcaaaagatttaccagacctatcaggagacc
tgcgatcgctccggtctggtggattttgccgaactgctgctgcgcgcccacgagctatgg
ctcaaccggccgcacatccttgagcactaccgcgaccgcttccagaacatcctggtggac
gagtttcaggataccaacggcatccagtacgcctggctgcggatgctggcgggcaacagc
ggcaaggtgatgatcgtcggtgacgatgaccagtccatctacggctggcgcggcgctaag
atcgagaacatccagcgcttcctgaccgactatcagggggccgagaccatccgcctcgag
cagaactaccgctccaccgccaatatcctcaaagccgccaacagcgtcatcgccaacaac
tcggaccggcttggcaaggagctgtggaccgagggggccgagggcgacccgatttccctc
tacgccgcctttaacgaggtggacgaagcccgtttcgcggtcggccgcctcaaggattgg
aaggaaaaaggcggcttgctcgccgactgcgccattctctatcgctccaacgcccagtca
cgggtgctggaagaggcgctgatgcaggacgccatgccctaccgtatctacggcggcctg
cgcttcttcgaacggcaagaaattaaagacgccatggcctacctgcggttgatcaacaac
cgtggcgacgacgccagcttcgagcgggtggtcaacaccccgacccgtggcatcggcgat
cgcaccctcgagatcctgcgcggcaacgcccgggatcaggggctcaacctgtggcaatca
gccaaggggctgctcaacgacaaagtgctgaccggtcgtgccggcaacgcggtgcgcggc
tttgtcgatctgatcgacgcactggaagagctggtcggcctgctgccgctgcaccagcag
gcagatatcgccatccagaactccggcctcaaggcgatgtatctggcggaaaaaggcgag
aaatcccaggcgcgggtagaaaacctggacgaactggtcaccgcctgccgtcaatacaag
cgcccggacgagctggaggatatgagcgatctctccgccttcctcgcccatgcggcgctg
gaatccggcgagagtcaggcggacgaatacgccgacgcggtgcagctgatgaccctgcac
agcgccaaggggctggagttcccgctggtgctgctggtcggcgtcgaggaagggatgttc
cccagcccgcaatccaccgaggagtcgggccgcctggaagaggagcgccgcctctgttac
gtcggcatgacccgcgccatggagaagctctacatctgttatgccgagagccgccgcatc
tatggccgcgaaatgcagcacagcgtgagccgctttatccgcgagatccccgccgagtgt
ctggaagagatccggctgcgcacccaggtcagccgccccacccagtacggccgctttagc
cagaacgaggtgcagcagagcttcgacgccagcggcatcaagctcggccagcgggtgctc
catccgaaattcggcgaaggggtggtactcaacttcgaaggggtcggccagcagagccgg
gtgcagatccagttcgacgaggtcggcgccaagtggctggtgacggcctacgccagattg
gaagcgctgtaa
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