Aeromicrobium erythreum: AERYTH_13045
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Entry
AERYTH_13045 CDS
T04236
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
aer
Aeromicrobium erythreum
Brite
KEGG Orthology (KO) [BR:
aer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aer03019
]
AERYTH_13045
Enzymes [BR:
aer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AERYTH_13045
Messenger RNA biogenesis [BR:
aer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AERYTH_13045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_22
AAA_19
RoxA-like_Cyt-c
AAA_11
AAA_30
HA2_N
ParA
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ALX05558
UniProt:
A0A0U4CR35
LinkDB
All DBs
Position
2750426..2752954
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AA seq
842 aa
AA seq
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MSDPLHSLLAAPPDLPVVTGLGALDEAVRGRGVAVVHAPPGTGKTTLVPPAVAVAVEGRV
VVTQPSRIAARAAARRLAHLLGEPVGETVGYAVRGDRKSSRRTRVEVVTTGLLLRRIQHD
PELAGVGAVVLDEVHERHLDADLTLALLVDVRANLRDDLVLVAMSATVEAERTAALLASA
EKEPAPVVDIPGALHPVQSVWSPAPPGVRRTDDRGINPAFHDHVAATVRRALAEHDGDVL
VFVPGVAEVDAAMRRLHDVDADVHPLHGRLPGAEQDRALSEGPRRRVVVSTAVAESSLTV
PGVRVVVDAGFSREPRTDHRRGLSSLVTVAVSKAAAEQRAGRAGRLGPGAVLRCWSKEEH
ARLADHPEPEIATADLTAFALEVACWGNDDVRDLALLDPPPEHALATARQTLIELGATTD
DGRATARGRVMAGVPVDPRLARALIDGSPLVGARRAAEVVAMLGEDVRAPGGDLVAALRS
LRSAHRSGPWREQVKRLEAIAKEHANEATGARSLTDDVAVGLVVALAHPDRIARKRRGGS
AYLMTGGTGAAFDPRDPSPLAGLEWLAVADANRRSGEREARIRSAAPLTEDLALEAAGSS
WTEVDDVTWADGRVRARRRTLLGAIELSSVPVKDPPADAVTAAIREALETEGIDLLTWSE
SATTLRARLDFLHRAIGAPWPDVSDDALTETLESWLGPQLARVRSAQDLRRIDVTSALRA
VLPWPEASRLDELAPERVEVPSGSSVRIDYAQEQPVLAVRLQEVFGWTTTPTLADGRVPV
LLHLLSPARRPAAVTADLDSFWDNGYPGVRADLRGRYPKHAWPDDPRSAPATRRTKPTRD
QR
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacccgctccacagcctcctcgccgcaccgcccgacctgccggtcgtcacgggg
ctgggtgcgctggacgaggcggtgcgaggtcggggcgtcgcagtggtccacgctcctccc
gggaccggcaagacgacgctcgtcccgcctgccgtcgcggtggccgtcgagggtcgcgtg
gtcgtcacgcagccgagccggatcgcggcccgcgccgccgcgcgacggctggcgcacctg
ctcggcgagccggtgggcgagaccgtcgggtacgccgtccgcggcgaccggaagtcgagt
cggcgcacgcgggtcgaggtcgtcaccaccgggctcctgctgcgacgcatccagcacgac
cccgagctggccggcgtcggggcggtcgtgctcgacgaggtgcacgagcgccacctcgac
gccgacctgaccctcgcgctgctcgtcgacgtgcgcgccaacctgcgcgacgacctcgtc
ctcgtcgcgatgtcggccaccgtcgaggccgagcggaccgcggcgttgctcgcctccgcc
gagaaggagcctgcgccggtggtcgacatcccgggcgcgctgcaccccgtgcagtccgtc
tggagtccagcgcctcctggcgtgcgtcgcaccgacgaccgcggcatcaacccggccttc
cacgaccacgtcgccgcgaccgtccgccgcgcgctcgccgagcacgacggggacgtcctc
gtcttcgtgccaggtgtcgcggaggtcgacgcggccatgcgacggctgcacgacgtcgac
gccgacgtgcaccccctgcacggacgcctgccgggcgcggagcaggaccgtgcgctcagc
gagggtccacgtcgcagggtcgtcgtctcgaccgcggtcgcggagtcgtcactgaccgtg
ccgggcgtgcgggtcgtcgtcgacgccggattctcgcgggagccgcgcaccgaccaccgt
cgcgggttgtcgtcgctcgtgaccgtcgcggtgagcaaggccgcagcggagcagcgggcg
ggacgcgccggacgcctcggaccaggtgccgtgctgcgctgctggtcgaaggaggagcac
gcccgcctggccgaccacccggagcccgagatcgccaccgccgacctcaccgcgttcgcg
ctggaggtcgcctgctggggcaacgacgacgtgcgcgacctggccctgctcgacccgcca
cccgagcacgccctggccacggcacggcagacgctcatcgagctcggcgcgaccaccgac
gacggacgagccaccgcccgcggccgcgtgatggcgggcgtgcccgtcgacccgcgcctg
gcgcgagcgctcatcgacgggtcgccgctcgtcggggcccggcgcgcggccgaggtggtg
gcgatgctgggcgaggacgtccgcgcacccggcggcgacctcgtcgccgcgctccgctcg
ctgcggtcagcacatcggtcggggccgtggcgcgagcaggtgaaacggctcgaggccatc
gcgaaggagcacgcaaacgaggcgaccggcgcgcggtcgctcaccgacgacgtcgccgtc
ggcctggtcgtggctctcgcccacccggaccgcatcgcccgcaagcgccggggcggctcg
gcgtacctgatgaccggcggcaccggcgccgccttcgacccccgcgaccccagcccgctg
gcgggcctggagtggttggccgtcgccgacgccaaccgacggtccggggagcgcgaggcc
cgcatccgctcggccgcgcccctcaccgaagatctggcgttagaggccgcgggctcgtcg
tggaccgaggtcgacgacgtcacctgggccgacggtcgggtgcgggcgcgccgccgcacg
ctgctcggcgcgatcgagctctcgtcggtcccggtcaaggacccgcccgccgacgcggtg
accgcagccatccgggaggcgttggagaccgagggcatcgacctgctcacctggtcggag
tcggccaccaccctccgcgcccgtctcgacttcctccaccgcgcgatcggcgccccgtgg
cccgacgtcagcgacgacgcgctgaccgagaccctcgagtcgtggctcgggccgcagctc
gcgcgcgtccgctccgcccaggacctccgccgcatcgacgtcacctcggccctccgcgcc
gtcctcccctggcccgaggcgagccggctcgacgagctggcacccgagcgggtagaggtt
cccagcggatcgagcgtgcggatcgactacgcccaggagcagcccgtgctggccgtccgg
ctgcaggaggtcttcggctggaccacgacgccgacactcgcggacggcagggtccccgtg
ctgctgcacctgctctcccccgcgcgtcgcccggccgcggtcaccgccgacctcgactcc
ttctgggacaacggctacccgggcgtccgggccgacctgcgcggccggtacccgaagcac
gcctggcccgacgatccccgcagtgcacccgcgacccgacggacgaagccgacgcgcgac
cagcgctga
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