KEGG   Aeromicrobium erythreum: AERYTH_15445Help
Entry
AERYTH_15445      CDS       T04236                                 

Definition
(GenBank) hypothetical protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
aer  Aeromicrobium erythreum
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:aer00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    AERYTH_15445
Enzymes [BR:aer01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AERYTH_15445
DNA repair and recombination proteins [BR:aer03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     AERYTH_15445
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
3227796..3230405
Genome map
AA seq 869 aa AA seqDB search
MPSRGSSSSQTVTIDGRRLRLTNPDKVLYPATGTTKAEVISYYVAVADRLLPHASGRPVT
RKRWPDGVGAVGEAPGGGSGPRAEKAPGGGSGPRAEKAPGGGSGPRAEKSAELFFEKNLP
DSAPDWVRRVVVRHKSHVNVYPLVDGPAALAWLGQVAALELHVPQWRVEADGTPRHPDRL
VLDLDPGPGVGLAECVEVAHAARDLLADVGLEAFPVTSGSKGLHLYAHLTGEHDADYVNA
FAKQVAAALQDELPDLVVSSMKKSLREGRVLVDWSQNNQAKTTIAPYSLRGRAAADGEGP
FVAAPRSWDELGPDLRHLTMEEVLERDDDPLAGLDPQPTSGDEAPVAAPDRLTVYRSMRD
ASRTPEPVPAEAPTERGADPIFVVQEHHATRLHYDVRLEREGVLVSWAVPKGPPTDPSRN
HLAVPTEDHPMEYATFEGTIPRGEYGAGQVSIWDHGTYTLEKWKEGEVIAVLHGSAGGGL
GGSVRFALIRTGENWLMHRMDPPAAPDTAAADTAAADDGTAPTTTPTTDEPDGGGPPDAG
RLETVAPMLASRPDGLDPHRDADAWAFEMKWDGVRVVATCDGGAVRLVGRSGKDVTTTYP
EVAEALAGLHLDDAVVDGEVVALGDDGAPSFGRIQQRIGLVRPRDVAAARRAVPVRYVVF
DLLRLGGTDVTGLPYVQRRELLEGLDLDDADRVDVPAAFDGDLDAALASSRELGLEGVVA
KRRSSRYRPGSRSAHWVKLKHEDHVEVVVVGWRPGRGGRTGGVGSLLVAVPDAAGGLRYA
GRVGTGFDERALADLARRLEPLRRDQPTVEAPRDVAREAVWTEAELVGEVTAAGWTDSGH
LRHPVWRGLRADKTVADVEPVADPRPDPS
NT seq 2610 nt NT seq  +upstreamnt  +downstreamnt
atgcccagccgcggctcgtcgagcagccagaccgtcacgatcgacggtcggcgcctgcgt
ctgacgaaccccgacaaggtgctgtacccggcgacgggcaccaccaaggccgaggtgatc
tcctactacgtggccgtcgcggaccggctcctcccccacgcctccgggcggccggtcacc
cgcaagcgctggccggacggcgtcggcgctgtcggtgaggcccccggcgggggttccggg
ccacgggcggagaaggcccccggcgggggttccgggccacgggcggagaaggcccccggc
gggggttccgggccacgggcggagaagagcgcagagctcttcttcgagaagaacctgccg
gactccgcgcccgactgggtgcgccgcgtggtggtgcggcacaagagccacgtgaacgtg
tacccgctcgtggacgggccggcggcgctggcgtggctggggcaggtggcggcgctggag
ctgcacgtgccgcagtggcgggtggaggccgacgggacgccgcgccacccggaccggctg
gtgctcgacctcgaccccggcccgggcgtggggctggcggagtgcgtggaggtggcgcac
gcggcgcgcgacctgctggccgacgtcgggctggaggcgttcccggtgacgagcggcagc
aagggcctgcacctgtacgcgcacctgacgggcgagcacgatgccgactacgtgaacgcc
ttcgcgaagcaggtcgctgcggcgctgcaggacgagctgcccgacctcgtggtctcgtcg
atgaagaagtcgttgcgcgagggtcgcgtgctcgtcgactggagccagaacaaccaggcg
aagacgacgatcgcgccgtactcgctgcgcggtcgtgcagcggccgacggggagggtccg
ttcgtcgccgcgccgcggtcgtgggacgagctggggcccgacctgcgtcacctgacgatg
gaggaggtgctcgagcgcgacgacgacccgctcgcgggcctggacccgcagccgacgtcg
ggcgacgaagcacctgtggccgcaccggaccggctgacggtctaccgctcgatgcgcgac
gcgtcgcgcacccccgagccggtgcccgcggaggcgccgacggagcgaggcgccgacccg
atcttcgtggtgcaggagcaccacgccacacgcctgcactacgacgtccggctggagcgc
gagggcgtgctcgtctcgtgggccgtgccgaagggtccgccgaccgacccgagccgcaac
cacctcgccgtccccaccgaggaccacccgatggagtacgcgacgttcgaggggaccatc
ccgaggggcgagtacggcgcggggcaggtcagcatctgggaccacggcacgtacacgctg
gagaagtggaaggagggcgaggtcatcgccgtgctgcacgggtccgcgggcggtgggctg
ggcggcagcgtgcggttcgccctcatccgcaccggcgagaactggttgatgcaccgcatg
gacccgccggcggcccccgacactgcggcagccgacactgcggcagccgacgatggcacc
gcgcccacgaccacgcccacgacggacgagcccgacggcgggggtccgcccgacgccggc
cgcctcgagaccgtcgcgcccatgctcgcgagccggcccgacggcctcgacccgcaccgc
gacgccgacgcctgggcgttcgagatgaagtgggacggcgtccgcgtggtggcgacgtgc
gacggcggggccgtgcggctcgtggggcgcagcggtaaggacgtgacgacgacctacccg
gaggtcgccgaggcgctcgccgggctgcacctcgacgatgccgtcgtcgacggcgaggtc
gtcgcgctcggcgacgacggtgcgccgtcgttcggacgcatccagcagcgcatcgggctc
gtccggccgcgcgacgtcgccgcggcgcgccgggccgtgcccgtgcgctacgtcgtcttc
gacctgctgcggctgggcgggaccgacgtcacgggcctgccctacgtgcagcgccgcgag
ctgctcgagggcctcgacctcgacgacgccgaccgggtcgacgtgcccgccgccttcgac
ggcgacctcgacgccgcgctcgcgtcgagccgggagctgggcctcgagggcgtggtcgcg
aagcggcgcagcagccggtaccggcccggcagccgctcggcgcactgggtgaagctcaag
cacgaggaccacgtggaggtggtcgtggtcgggtggcggcctggccgcggcgggcgcacc
ggcggggtggggtcgctgctcgtcgcggtgcccgacgcggccggtggcctgcgctacgcg
ggtcgcgtgggcaccgggttcgacgagcgcgcgctcgccgacctcgctcgccggctcgag
ccgctgcgccgcgaccagccgaccgtcgaggccccgcgcgacgtcgcccgggaggcggtg
tggaccgaggccgagctcgtcggcgaggtcaccgcggcgggctggaccgactccggccac
ctgcgccaccccgtctggcgcggcctgcgcgccgacaagaccgtcgccgacgtcgagccc
gtcgcggacccccgacccgacccgagctga

DBGET integrated database retrieval system