Aestuariibaculum sp. YM273: RBH94_09275
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Entry
RBH94_09275 CDS
T09314
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
aest
Aestuariibaculum sp. YM273
Pathway
aest00470
D-Amino acid metabolism
aest00550
Peptidoglycan biosynthesis
aest01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aest00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RBH94_09275 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBH94_09275 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aest01011
]
RBH94_09275 (murD)
Enzymes [BR:
aest01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RBH94_09275 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
aest01011
]
Precursor biosynthesis
Amino acid ligase
RBH94_09275 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD_N
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
Pyr_redox_2
DAO
Motif
Other DBs
NCBI-ProteinID:
WMI64253
UniProt:
A0AA51GI04
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All DBs
Position
2193150..2194481
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AA seq
443 aa
AA seq
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MKRLVVLGGGESGVGTALLAKAKGYEVFVSDKGKIKDKYRQVLIHNEIEWEDETHSESKI
LNADIVMKSPGIPDKAPLVKQIREKGIQVVSEIEFASKFTKATIVGITGSNGKTTTSTLT
HYILKQELNVGLGGNIGDSFAKQVLEHDYPNYVLEISSFQLDDIDTFKPKIAVLLNVTPD
HLDRYDYKFENYIASKFRIAENQTKEDYLVYDADDEVITNWLKEHPVQSTLLPFSITKKV
DKGAYLEEEKMIIAIDNNQIHMSTNNLALEGKHNIKNAMAASTVAHLLKIRKQTIRESLE
SFQGVEHRLEQVLKINKVQYINDSKATNVNATYFALESMDAPTIWIVGGVDKGNNYEELF
AFVNEKVKAVICLGVDNDKLIDTFGGMVDTIVETQSMEEAVKMAYKLSESGDNVLLSPAC
ASFDLFENYEDRGRQFKDAVRNL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgattagtggtgcttggaggaggagaaagtggagtaggaactgcacttctcgca
aaggctaaaggatatgaagtttttgtgtctgataaaggaaaaataaaagacaaatataga
caggttcttatacataatgagattgaatgggaagacgaaacgcattcggaatctaaaatt
ttgaatgccgatatcgtgatgaaaagccctggtattccggataaagcgcctttggtaaaa
caaattcgcgaaaaaggaattcaggtggtttcagaaatcgaattcgcatcaaaatttaca
aaagcaaccattgttggaattactggtagcaacggtaaaaccacaacttcaacattaacg
cattacattttaaagcaggagttgaatgtaggtttgggcggtaatattggtgatagtttt
gcaaaacaggttttagaacacgattacccgaattacgttttagaaatcagtagttttcag
ttagatgatatcgatacatttaaaccgaaaattgctgtattactgaatgtaactcctgat
catttagatcgatatgattacaagtttgaaaattatatcgcttcaaaattcaggattgca
gaaaatcaaaccaaagaagattatttggtttacgatgccgatgatgaagtgatcaccaat
tggttaaaagagcacccggttcaatcgacattattaccgttttcaataacaaaaaaagta
gataagggtgcatatttagaagaggaaaagatgattatagcaattgataacaaccagata
catatgtcaacaaacaatcttgcattagaaggtaagcataatattaaaaatgctatggca
gcctcaaccgtagcgcatttgcttaaaattagaaagcagaccatccgcgaaagcctagaa
agttttcaaggtgttgaacatcgtttagagcaggtgcttaaaattaataaagtacagtat
ataaacgattctaaagcaactaatgtaaacgcaacatattttgctttagaaagtatggat
gcaccgactatttggattgttggcggggttgataaaggcaataattatgaggagttattt
gcttttgtaaatgagaaggtgaaagctgttatctgtctgggtgttgataacgataaactt
attgatacgtttggaggtatggttgatactattgttgaaactcaaagtatggaggaggct
gtaaaaatggcttataagttgtctgaatctggggataacgtactattgtctcctgcatgt
gcaagttttgatttgtttgaaaattatgaagaccgtgggcgtcagtttaaagatgctgtt
agaaatttataa
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