Actinidia eriantha (wild kiwifruit): 130770609
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Entry
130770609 CDS
T09464
Name
(RefSeq) chromatin structure-remodeling complex protein SYD-like isoform X1
Organism
aew
Actinidia eriantha (wild kiwifruit)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
ResIII
DEAD
HDA2-3
DEAD_2
Motif
Other DBs
NCBI-GeneID:
130770609
NCBI-ProteinID:
XP_057484083
LinkDB
All DBs
Position
28:complement(17773318..17799499)
Genome browser
AA seq
3177 aa
AA seq
DB search
MAAPHNVELEAAKFLQKLIQESTDEPRKLAAKLYVILQHMRSSGKENSMPYQVISRAMET
VINQHGLDVEALNSSRLPLTGGTHMGDSSSIQFAGSSQAAAIARDSKPGIAENKVANSHA
LSRPPVGPSNAAHDIYQGSVSHPTSKSLDHESPSSYDTRSANSQSQERHDATSEKANQNG
SKKTGGKRKRADLLSTSEAHIENSKQINTSNLNARKGKLGNKVEAPGSLSVKGNEHSQFN
MVQSSGQLERILSLPNSLRSTNITNSMLRAANSKCPDEIEVSSAHSVLGLQQGGPRLSTQ
EILSSKGGLWYQNRIGSSLEISPVPSLPSDTGSGNSTAEMLMHQSTAPLGSGASGKVHGA
ASGATCSHPPAEPGIPSTMHFGSASYDSHILVAKMNKERNREAFSASHSVEPSAAKPTLD
PEYWKHGFTKGAVTNTSERTGEAQFYLANRGELVSSTLSTGKAFEHERGAANALPNANKI
VQSGIPASNAEMNMLKGAAPRDTGKSPISQSAGVPYMPFKEQHLKQLRAQCLVFLSFRNG
MMPKKLHLEIALGNFFPKEDGPSRELIDNKGKELSINDPSNILEDTMPLGRLNDVRETEI
VPQAPSSTGNHAEANFLKESEDPNMIQEIAESQAFLTKGPKPNSLRGGLTVSNHKDDLEN
GQQAGIANQASSVMGISKQMKSDTISWTGIGSHNESAKGSLPGSMVPHESLPDRKDSAPS
PSQLLPEYNIQRSRRADSHLTAFPSRELWKPISGVEAEHQTAMPVKDGNVLTKNVSEIQK
KGSPTAVETDQEEQDMSLDSDLPPAPKYSTSEKWIMEHQKRRLLTERNWALKQKKTERRI
GTCSDKLKEAVSSSEDISAKTKSVIELKKLQLLELQCRLRSDILNDFFKPIAIEMDRLKS
TKKNRIGRRSKQIEKFEQKMKEERQKRIRERQKEFFSEIEVHKERLDDVFKMKRERWKGF
NKYMREFHKRKERIHREKIDRIQREKINLLKINDVEGYLRMVKDAKSDRVMQLLKETEKY
LQKLGSKLKEAKTMAGHFKADIGENQAASVFENSEIDVENEDDADQAMHYLESNEKYYLM
AHSIKESITEQPPCLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLIC
YLMESKNDRGPFLVVVPSSVLPGWVSEINFWAPSINKIVYSGPPEERRRLFKERILQQKF
NVLLTTYEYLMNKHDRPKLSKLHWHYIIIDEGHRIKNASCKLNADLKHYHSSHRLLLTGT
PLQNNLEELWALLNFLLPNIFNSSEDFSEWFNKPFESNGDNSPDEALLSEEENLLIINRL
HQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEDNLGAIGTSKGRSVHN
SVIELRNICNHPYLSQLHAEQVHDFVPKHYLPNMVRLCGKLEMLDRLLPKLKATDHRVLF
FSTMTRLLDVMEDYLCWKQYRYLRLDGHTSGGDRGALIEQFNRSGSPFFIFLLSIRAGGV
GVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKKDVLVLRLETVQTVEEQVRAAAEHK
LGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEAAPVLDDDALNDLIARSESEIDI
FEAVDRQRREEEMTMWKNLVLGQGKEISESVPPLPSRLITNDDLKSFYEAIKIYEVSNPR
VASNIGAKRKGQSLGGLDTQHYGRGKRAREVRSYEEQWSEEEFEKMCQADSPESPRTKEE
VIEKSSPVVASGSITFAPKIEPPAPAPTVSPQPPTEPPIQQIKEVTITPPSKRGRGRPKR
AMAEISPPPVVLPASSGPIKTEMASQNVTASSFPPPPGFDSSPSSGTVKSVTETSHEFGV
QIAATSESTPPLPSVAPAAPAAQSTQTPPPVAMQVKGQTRKIRVGAEAPRRRGRNQASLA
PAVPVLQARPASGKTDIVLERETVSVFPAASCPDSVPSTYVIKGMSNEQSSVPPAAEAPR
RRGRHHNSLPPAVPALQAPPANGKTAMIVQRETVSSLPSSSCQDSVPSSSPVKSMSNEQS
SVPPSAPVLPASSETVKMDLGSEVRPISSNPMVPAPDTSPATSIITAFSGSVLNTEVGNA
PSSQPNPPFTYDTLGSQSINPSPPVPKQPKGRGRKPQSGVEAPQRRGRKRGPVAPIGADG
LASGDPKSNEQQQSTAQKFEGLAGLEAKPSGQPDYLAQNKHQKAFSTTSDSSDIPLDKSG
SQKMDAKAQEMKGPVLEEPIVSESVAAESKSMEKKKNSMLETAAAVVDQEIQMTKTDVSV
KTRETNDPKLQETVVSKPAVCELETKLDAGSSITVEDSRDVVEEKTSVKINMEGTSAVPP
SAELLVDGTCEPDASVLDLKVDPCEDQSVKEQEKEQQMKGPGQDDVVVSEPGETSSLEEK
KTSTLSTFETATPVVDPEIEKTRKKADAEAQGPILQEDVVSKAEAFESETKINAGDFENV
ADPKDLVKENLIVGTSVEGSSVFSLNTDSSDDVPYERLLASDASVLETAASVLAITVDKG
GDQSQKEDGKEQDIKCPVQDEAIVSQPGESQSLEEKTVSTMSNLEPAASVVDTEIKKTQK
EVDAEALESTDPILLEADVSKPEACEPETNPNASGENLADIRELVIENSMVEVNLEEGTS
AITLNADAILEKEAPAFDAETEKIEKDVDAIAQESNDPILQSCGSETEISAGSSENLADP
RDLFRKNLTVGPIVEGTSVVSLNVVDPLAGVLSEKPAAPEVSPLELTMDKGEDHGKEDAT
EQKMEDALVDEAVVTEAVVAETKSLEESTSSVLEKAALVVDSETEKTEPKVDEEAQEGDD
PIFQEAVVSEPEFCEPETELEAGSSEKVVDPRDVDEENSDPPETLEKYPTPDALVLETAA
SNLEFTTNKCEDQSGKEDTKEQEMEDTLLEKGLVPEPLVTENRSSEEGETVPTFVDPPHI
NPDTQPNAGSSENAADSEQEKKGTVLDKGLVSEPSVSENQSLEEGEAVSPIVDPPHEKPD
IQLHTGSSENVADLEEQERKGTVPTEGLVSEPAVTENQSSEEGEAVPLIVDPPNEMPDTQ
LNPGSSENEADLEEQERKGTAPDKGLVSESAVTENQSSERETVCPIAYPPHKQPETQINA
GPCENAGDSEHVEERNDTILDKGLVSEYAATENQSSEDRETLVSASSSENMGTRNMP
NT seq
9534 nt
NT seq
+upstream
nt +downstream
nt
atggcagctccgcataatgttgagctggaggctgcgaagtttctacagaaactaatccag
gaatctacagacgagcctagaaaattggctgcaaaactttatgtgatattgcaacacatg
agatcaagtgggaaggaaaactcaatgccttatcaagtgatatcaagggcaatggagact
gttataaatcaacatggtcttgatgtggaagctctgaattcatcacgtcttcctttgact
ggtggaacccacatgggtgattcttcatcaatacagtttgcaggttcttctcaagcagcg
gcgattgcaagggattctaaaccggggattgctgaaaataaggtggccaattcacatgct
ttaagcaggcctcctgttggcccaagcaatgcagcacatgatatttatcaaggatctgta
tctcatcccacttctaagtctctcgatcatgaaagtccatccagttacgatactaggtct
gccaactctcagtcacaagaaaggcatgatgcaacatcagagaaagcaaatcaaaatggt
agtaagaaaaccggtggtaagagaaaaagggctgatttgttatctaccagcgaggcacat
attgaaaactccaaacaaattaatactagcaaccttaatgcaaggaaggggaaattgggg
aacaaggttgaagcacctgggagtttgtctgttaaaggaaatgagcatagccagttcaat
atggttcagagcagtggtcagttggaacgtatcttgtctttaccaaatagcttgagatca
acaaatattaccaattcaatgctacgggctgcaaattcaaaatgccctgacgaaatcgaa
gtttcttctgctcatagtgttttaggtctacagcaaggaggccctcggctctcaacacag
gaaattcttagttccaaggggggtttatggtatcaaaataggataggatcctcacttgaa
atatctccagtgccaagccttccttctgatactggttctggtaattcaacagcagaaatg
ttgatgcaccagtcaactgctcctcttggatcaggagcatctggcaaggttcatggagca
gcctctggtgctacttgttcacatccaccagcagaaccaggaattccaagtacaatgcat
tttggcagtgcttcatatgatagtcatatcttggttgcaaagatgaataaagaaagaaac
agggaggccttttctgcctcgcattcagttgagccgtctgctgctaaacccacacttgat
cctgagtattggaagcatggattcacgaaaggtgcagtgacaaatacttcggagagaact
ggagaagcacagttctatttggctaatcgtggggaattagtatcctcaactctgtccact
ggaaaggccttcgaacatgagagaggagctgcaaatgcattaccaaatgcaaataagata
gttcagagtggcattccagccagtaatgcggaaatgaacatgcttaaaggtgcagctccc
agagatacagggaaatctccaatctcccagtctgctggtgttccttatatgcctttcaag
gaacaacatctaaaacagctcagagctcagtgccttgtatttttgtcattcaggaatggt
atgatgccaaagaaactacatcttgaaattgcactcggaaacttttttccaaaagaagat
ggacctagcagagagctgattgacaataaaggaaaagagctatctattaatgatcctagt
aacatacttgaagacacaatgccgcttggaagactgaatgatgtgagggaaactgaaata
gtcccccaagctccctcatctaccggcaatcacgctgaggcaaactttctgaaggaatcc
gaggacccgaacatgattcaggaaatagcagaatcgcaagcattcttaaccaagggacca
aaaccaaattctttaaggggtggtttaactgttagtaatcacaaggatgatttggaaaac
ggacaacaagctgggattgcaaaccaagcttcctctgttatgggaataagcaagcagatg
aagtctgatacaattagctggactggaattggcagtcataatgagtctgctaagggctca
cttcctggctctatggttccacatgaatcattgccagacagaaaagatagtgctccaagt
ccttctcaactccttcctgaatataatattcagcgaagccgacgtgctgatagccatttg
actgcttttccatcaagagagctttggaagcccatctcgggagtggaggctgaacatcag
acagcaatgccggtgaaggatggtaatgtgttgacgaaaaatgtgtctgaaattcaaaag
aagggcagccccacggcagtggaaaccgaccaagaggagcaagatatgtctttggactca
gatttgccaccagctccaaagtatagcacatccgagaagtggattatggaacatcagaaa
cggagactgttaactgagagaaattgggcgctaaaacagaaaaagacggaacggagaatt
ggcacttgttctgacaaattaaaggaagcagtgagttcgtctgaagatatatctgcaaaa
accaaaagtgtcattgaactgaaaaagcttcaattgttggagctgcagtgccgtctccgt
agtgatattctaaatgatttttttaaaccaatagcaattgagatggatcgtttgaaatca
actaagaagaatagaatcggtaggagatcaaaacaaattgaaaaatttgagcagaaaatg
aaggaagagcgccaaaagagaattcgtgagaggcagaaggagttcttcagtgagatagaa
gttcacaaggagagactggatgatgtattcaaaatgaaaagagaacgctggaagggtttc
aataaatacatgagggagttccataagaggaaggaacggattcatcgtgagaagattgac
agaatccagcgtgagaagattaatctgttgaaaatcaatgatgttgaggggtacctccga
atggttaaggacgcaaaatcagatcgtgttatgcagctgctgaaagagacagagaaatat
cttcagaagctagggtccaaactaaaagaggcaaaaactatggctggacactttaaggct
gatatcggggagaaccaagctgcaagtgtttttgagaacagtgaaattgatgttgagaat
gaagatgatgctgaccaggcgatgcattatctggaaagcaatgagaagtactatctgatg
gctcatagtataaaagagagcatcacggagcagccaccttgtcttgtgggtggaaaacta
agagaataccaaatgaatggactgcggtggttggtttcgctgtacaataaccatttgaat
gggattcttgcagatgaaatgggccttggtaaaactgttcaggttatttctctaatttgt
tacctaatggaatcaaaaaatgacagaggacccttcctagttgtagtcccatcctcagtt
ctgcctgggtgggtgtcagaaattaacttttgggcccctagtataaacaaaattgtttat
tctgggcctccagaggaacggcgaaggctattcaaggaaagaattcttcagcagaaattc
aatgtccttttgacgacatacgagtatctgatgaacaagcatgataggccaaaattaagc
aaattacactggcactatattataatcgacgaaggtcatcgcataaagaatgcttcttgc
aagttgaatgcggacttgaagcactatcatagctctcacaggttgctgttgaccgggaca
cctctgcagaataatctggaggaattgtgggcactgctcaactttttgttgccaaatatt
tttaactcttcggaggatttttctgagtggttcaacaaaccatttgagagcaatggtgat
aattcacctgatgaagccttgctgtccgaggaagagaaccttctgattataaaccggctt
caccaagttctgcgaccatttgtacttcggagactgaaacacaaggttgaaaatgaattg
cctgaaaagattgaaagacttgtaagatgcgaggcctctgcatatcagaaacttttgatg
aagagggtagaagacaatcttggtgcaattggaacttcaaagggtcggtcagttcacaac
tctgttatcgagctacgtaacatatgcaatcatccttatctcagccaacttcacgcagag
caggttcatgattttgtccctaaacattatctgccaaacatggtgagactgtgcgggaag
cttgaaatgttagatcgattattaccaaagctaaaagcaacagatcatcgggtccttttc
ttttccacaatgactaggctgctagatgttatggaggattatctgtgctggaaacagtac
cggtatctccgcttggacggacatacatctggtggtgatcgtggagcccttattgagcag
tttaaccgatcgggttctcctttttttatatttctgctcagcattcgagctggaggtgtt
ggagtgaatcttcaagctgctgatactgtgatcatttttgacacagattggaatccacag
gttgacctccaagcacaggcgagagctcataggattggtcagaagaaggatgtgcttgtt
cttcgattagaaacggtccaaactgttgaggaacaagttagagctgcagccgaacacaaa
cttggagttgccaatcagagcattactgctggattctttgacaataacacaagtgcggaa
gatcggagagaatacttggaatccctcctgcgggagtgcaagaaagaggaagctgcacct
gtattggatgatgatgctctgaatgatctcatagcacgcagtgagtctgagattgatata
tttgaagcagttgacagacaaaggcgggaagaagaaatgacaatgtggaaaaacttggta
ttaggacaggggaaagagatttctgagtctgtaccgcctctgccttctcggcttataaca
aatgatgacttgaagtcattctacgaagcaattaagatatatgaagtatccaatcccagg
gttgcatctaatattggggcgaaaaggaagggccagtctcttggtggcctagacacacaa
cattatggaaggggcaagcgagcaagagaggtgcgctcctatgaagagcagtggtcggaa
gaagaattcgagaagatgtgccaagctgattcccctgaatcccctagaacgaaggaagaa
gtgatagagaaaagctcaccagtagttgccagtgggtctatcacattcgcccctaaaata
gaacccccagccccagcccccacagtgtccccacaacctccaacagagccgccgattcag
caaattaaagaggtaaccataacaccaccatctaaacggggccgtggaagaccaaaaaga
gcaatggcagaaatctctccacctccagtggttcttccggcatcttcaggacccatcaaa
acagagatggcatcccagaatgtaacagcttccagctttccgcccccacctggttttgat
tcatcacctagttctggtacagtaaaatctgttactgaaaccagtcatgaatttggtgta
cagattgctgctacctctgagtcaacccctcctctcccttctgttgctcctgctgctcct
gctgctcagtctactcaaactccccctcctgtagcgatgcaagtaaaaggacaaacccgg
aaaattcgtgtaggagcagaagcaccccggcgtaggggaaggaaccaggcttcattggcc
cctgctgttccagttctccaagcacgtcctgcaagtgggaagacagacatcgtattagag
agagaaacagtttctgttttcccagcagcttcttgtcctgattctgtacctagcacttat
gttataaagggcatgtctaatgaacaaagttcagttccaccagcagcagaagcaccccgg
cgtagaggaaggcatcataattcattgccacctgcagttccagctctccaagcacctcct
gcaaatggtaagacagccatgatagtacagagagaaacagtttccagtttaccgtcatcc
tcttgtcaggattcggtacctagctcctctcctgtaaagagcatgtctaatgaacaaagt
tcagttccaccttctgctccagtccttccagcatcttctgaaactgtcaaaatggatttg
gggtcagaggtacgaccaatttctagcaatcccatggtccctgcccccgatacttctcct
gctacttctattataacagcttttagtggatctgtgcttaatactgaagtgggaaatgct
cctagttctcagccaaaccctccattcacttatgatactcttggatctcaatctatcaat
cccagtcctcctgtgccgaagcaacctaaaggacgaggtcgtaagcctcaaagtggagta
gaggcaccccagcgcagaggcaggaaacggggtccggtggcacctattggtgctgatggt
ttagctagtggggatccaaagtcaaatgaacaacagcagagtacagcccagaaatttgaa
ggtttagctggtctggaagcaaaaccaagtgggcaaccagattatttggcccaaaacaag
caccaaaaagccttctcaactacaagtgacagttctgacataccattggacaagtctggc
agtcagaaaatggatgctaaagcacaagaaatgaagggccctgtgctagaggaacccatt
gtttccgagtctgtggcagctgagagtaagagtatggagaaaaaaaaaaattctatgttg
gaaacagcagctgcagttgttgatcaggaaatccaaatgaccaagacggatgtttctgtg
aaaacgcgagagacaaatgatcccaagttgcaggagactgttgtttcaaagcctgcggtt
tgtgaacttgaaaccaagctcgatgctgggtcatctataactgtggaagattcaagagat
gtagttgaagagaagacgtcagtgaaaattaatatggagggcacttcggctgttcctccc
agtgctgaattattggttgatgggacttgtgagcctgatgcttcagttttggaccttaaa
gtggatccatgtgaggatcagtctgtgaaggaacaagagaaagaacaacaaatgaaaggt
cctggtcaagacgatgtagttgtttcggagcctggggagactagtagtttggaggagaaa
aagacttcaactctgtcaacgtttgaaactgcaactccagttgttgatcctgaaattgaa
aagactcggaagaaagccgatgcagaagcacaaggtcctattttgcaggaggatgttgtt
tcaaaggctgaggcatttgaatctgaaacaaagatcaatgctggtgattttgaaaatgtg
gcagatccaaaagatttggtaaaggaaaacttgatagtggggactagtgtggagggatct
tctgtgttttctctcaatactgactcatcagatgatgtgccttatgagagacttcttgcc
tctgatgcttcagttctggaaacagcagcttcagttttggccattactgtggataagggt
ggggatcaatctcagaaggaagatggaaaagaacaggatataaaatgcccagttcaagat
gaggcgattgtttcacagccaggagagagtcagagtttggaggagaaaacagtttcaacc
atgtcaaatttggaacctgctgcttcagttgttgatactgaaattaaaaagacccagaag
gaagttgatgcagaagcactagagagcactgatcctattttgctggaggctgatgtttca
aaacctgaggcttgtgaacctgaaaccaaccccaatgccagtggtgaaaatttggcagat
ataagagaactagtcatagaaaactcaatggtggaagttaatctagaggagggcacttca
gctattactcttaatgctgatgcaatcttggaaaaagaagctccagcatttgatgctgaa
actgaaaagattgagaaggatgttgatgcaatagcacaagagagcaatgatcctattttg
cagtcttgtggatctgaaactgaaatcagtgccggttcttctgaaaatttggctgatcca
agagatctatttagaaaaaacttgacagtggggcctattgtggagggcacttcagttgtt
tcgctcaatgttgttgacccattggctggtgtgctttctgagaaacctgctgctcctgag
gtttcacctctggaacttaccatggacaagggtgaggatcatggaaaagaagatgcgact
gaacaaaaaatggaagatgctcttgtggatgaggctgttgttacagaggccgttgtggct
gagactaagagtttggaggagtcaacgtcgtcagtgttggaaaaagcagctctggtagtt
gattctgaaactgaaaagactgagcccaaagttgatgaggaagcacaagagggagatgat
cctatttttcaggaggctgttgtttcagagcccgagttttgtgaacctgaaaccgaactc
gaggctggttcttcagaaaaagtggtagatccaagagatgtagacgaagaaaactctgac
ccgcctgagactcttgagaaatatcctactcctgatgctttagtactggaaacagcagct
tcaaatttggaatttacaacgaacaagtgcgaggatcaatctggaaaagaagatacaaaa
gaacaagaaatggaagatactcttctggagaagggacttgttccagagcctttggtgact
gaaaaccgaagttcagaggagggagaaaccgttccaacttttgtcgaccctccacacata
aatcccgacacccaaccaaatgctggttcatctgaaaatgcagcagattcagagcaagaa
aagaaaggtactgttctggacaaggggcttgtttcagagccttccgtgtccgaaaaccaa
agtctggaggagggagaagcagtatctcccattgttgaccctccacatgaaaagcccgac
atccaactacatactggttcatctgaaaatgtggccgatttagaagagcaagaaaggaaa
gggactgttccgactgaggggcttgtttcagagcctgctgtgaccgaaaaccaaagttcg
gaggagggagaagcagttcctctcattgttgaccctccaaatgaaatgcctgatacccaa
ctaaatcctggttcatctgaaaatgaggccgacttagaagagcaagaaaggaaagggact
gctccggataaggggcttgtttcagagtctgcagtgaccgagaaccaaagttcggagaga
gaaacagtatgtcccattgcttaccctccacataagcagcccgaaacccagataaatgcc
ggtccttgtgaaaatgctggagattcagaacatgttgaagaaaggaacgatactattctt
gacaaggggcttgtttctgaatatgcagcaaccgagaaccaaagttcggaggatagagaa
accctggtaagtgctagttcttctgaaaacatggggactcggaacatgccctga
DBGET
integrated database retrieval system
