Anoplopoma fimbria (sablefish): 129088820
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Entry
129088820 CDS
T09102
Name
(RefSeq) cadherin-2
Organism
afb
Anoplopoma fimbria (sablefish)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
129088820
NCBI-ProteinID:
XP_054452028
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All DBs
Position
3:complement(14617818..14702598)
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AA seq
1548 aa
AA seq
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MPVVTLRNLIGHEQAGDTGSFTHSKILQSHGASSVAIKERQAFKPKREVDSVNKKEVTLH
ILSSNKELNQDVKKVKNNTKNSETSTRTGRPEKTFAIRHKPDLHSNKTRFKSGSRSRTRP
DLGVHTTGVPGKGFSIDSNRKLNLTGSYGVLKLLSKENLVRIVNSQMQSAPSLSFPSKGS
RSRKRDLIDVNHGQLEAQRVSRQDMAVTQPHTGFDNQTAFPYLSPVTTPDLNRDQGANNH
INPLTEVDPALSKGQGNLGKQGSDGGDGKSKHIVRLLSTPRSEVSLSPEKEVIITQTEAP
FPSTKHLPLHVSSETNDSPPSVLTAQPLGVRPGSRVADPHRDPLTESVLSAQTELSTAQY
PADEDNQPVNSSHVLRLHPAPEWRHDAKDAGAQVSADLENGKGLVFEEAESEAEEDEEVH
DHMEGTGPRSRSRRSWIWNQFFVIEEYAGPEPVLIGRLHTDMDRNDGRTKYVLRGEGAGS
VFVIDEKTGNIHVTKPLDREEKDEYRLIATATDRQTDRALEPSSQFIIRVQDINDNPPIF
DEGPYTATVPEMANIGTSIIQVTATDADDPTYGNSARLVYTLVQGQQYFSVDPQTGILRT
AVPDMDRETQDQYLVLLQAKDMGGHLGGLSGTTTVTVRLTDVNDNPPRFTQSMWSFSVSE
LAIPGAEIGRISAADADLGENAKLEYTILEGETGETFNITGVNQEAVITLNKAVDYESRS
SYSFSVEVLNPIVDPRFLRRGPFKDRASIRVAVLDADEPPRFSRARYHMDVSENCPPACT
VGRVSAVDPDTGLTNNIRFSIDPQSDPEALFRITPDTGLITTAMELDRERDHWHNITVIA
TQRDNPSQVSRVVVAIETLDLNDNAPELDRQYTTAMCDSSSIGQVVQVLRAIDRDEGGND
STVYFSIPPESSAALNFSIRDSGGPTASLVLLSQIQPLSRSASSTLTLHVPLVLRDGTSG
LTSTGTVTVSVCPCLRGGARAGDKEKDKQTEGEWDWEREAVCLPQQSTLPSPGLSTAALL
AILACVATLLAVSALSLSLRRQKRDSLSPLEEDDVRENIITYDDEGGGEADTAAFDIAAL
QSAPHSSRSRGYRTLDSRNVRYAHQNQDKARTYSWAQNPGVEHTYSGPGGPLYGRLCYSS
HTLPVLRRTPGGAFEPGLAELGYRYPGGQPDHSLVIQNQGAMVGPMESGAIYIAPTDIST
GSRTGSRTGSRDGTAPQSGVSTSDGGTPRTNDSQERGGGMGTASNCTEGSSEDKGNHSQD
VDWVQSETLPREHHLVMTRSGSMMGQGHGAGGWVCDSTTLPLAGRRASRSGMSPKRKGSG
QAESDSSGHGGGGGGGGGGGGSGNGSGGASTDGQQQPANGRNYATVLQGEMSGQRDYPGS
LGRGGLEMGSNFVVPRGAYGGVMGFGPGWVPGMEAARGAPGPSGPSLALRVGEFLRLRLA
QVTFDPSQPPYDSVQVYGLEGTGSRAGSLSSLESEGEKDAEKEEWGAGLEEWGPQFQKLA
QLFKDREKEKEEKDKDEAGAKKESEKKDEPGKTEKKEGGEPAGEEGKD
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtggtgactcttaggaacctgataggtcacgagcaggcgggtgacaccggctct
tttactcattccaaaatattgcagagtcatggtgcatcatcggtggctatcaaggagagg
caagctttcaagcccaaacgtgaggtagactctgtcaataaaaaagaagtgactttgcac
attttatccagtaacaaggagctaaaccaggatgtgaagaaagtcaaaaacaacaccaag
aactctgagacttccaccagaacaggaaggcctgagaagacattcgcaatccgccataaa
ccagatctacacagcaataaaaccaggtttaaatcaggctcgagatccaggaccagacct
gatttgggtgtccataccacaggtgtgccggggaaaggattcagcatagattcaaaccga
aagctgaacctcaccggcagctacggggttctgaagctgctgtcgaaagagaaccttgtt
aggatcgtcaattcccaaatgcagagcgcacccagcctcagcttcccgagcaagggcagc
cggagcaggaagagagatttgattgacgttaatcacggacagttagaggctcagagagtg
tcgagacaagatatggctgtcactcagcctcacactggttttgataatcagactgcattt
ccttatttaagcccagtcaccaccccagatcttaatcgggaccagggagccaacaatcat
attaatccacttactgaagtcgacccagctttaagtaaagggcagggcaacttggggaag
cagggatcagatggtggcgatggcaagagcaaacatatcgtccgcttactgtcaacacct
cgcagcgaggtcagtctcagccccgagaaagaagtaataatcacccaaacagaagcacca
tttccatcaacaaaacatctcccactgcatgtttcctctgaaacaaatgattctccgccg
tctgtgctgacagcgcaacccctgggagttagaccggggagcagagttgcagatccccat
agagacccattaacggagtcagttctctctgctcaaacagaactcagcacagctcagtac
cctgcagatgaagacaaccaacctgtcaacagcagtcatgtcctgaggctccaccctgct
ccggaatggagacatgacgccaaagacgccggggcgcaagtctctgccgatttggaaaat
gggaagggcctcgtgtttgaggaggccgagtcggaggcggaggaggatgaggaggtgcac
gaccacatggaagggaccgggccgcgctctcgcagcaggaggagctggatctggaaccag
ttctttgtgatcgaagaatacgccgggcctgaacctgtgctcatcggacggctccacacc
gacatggacaggaatgatggacgcaccaaatatgtcctgcgaggcgagggggccggctcg
gtcttcgtgatagacgagaagacgggcaacatccacgtcaccaagccactggaccgggaa
gaaaaggacgagtaccgactcatcgccacggccaccgacaggcagacggaccgcgccctg
gagccctcatcgcagttcataatccgggttcaggacatcaatgacaacccgcctatcttt
gacgaaggcccctacaccgccaccgtgcccgagatggcaaatataggcacgtctataatc
caggtgacagcgacagatgctgatgacccgacttatggcaacagcgccaggctagtgtac
acactggtgcagggccaacagtacttctctgtcgatccccagacaggcattctgcgcacg
gccgtacccgacatggacagggagacccaggaccaatacttggtcctcctccaggccaag
gacatggggggccacctgggcggattatctgggaccaccaccgtcaccgtcaggctcacc
gacgtcaacgacaacccaccacgcttcacccagagtatgtggtccttctccgtgtccgag
ctggccatccccggggcagagatagggcgcatctcggccgccgacgccgacctcggagag
aacgccaagctggagtacaccatcctggagggggagaccggggagacgttcaacatcacc
ggagtgaaccaagaggcggtcatcacgctcaacaaggcggtcgactatgagagccggagc
tcctactccttctctgtggaggtcctcaaccccatagtagatcctcgcttcctgcgtcgg
ggccccttcaaggaccgggcctccatcagagtagcggtgctggatgcggacgagcctccg
aggttctccagagctcgataccacatggacgtgtctgaaaactgcccgccggcctgcact
gtaggccgggtcagcgcagtcgaccccgatactgggctcaccaataacatcaggttctcc
attgatcctcagtcagacccagaggctctgttccgtatcaccccagacaccggcctcatc
accacagccatggagcttgaccgggaacgcgaccactggcacaacattactgttatcgcc
acccagagagacaatcccagccaggtttccagagttgtggttgcgatagagacattagac
ctgaatgacaacgcacccgagctggacaggcaatacacaacggccatgtgtgactcatcc
tccatcgggcaggtggtgcaggtgttgcgggcgattgatagagatgagggagggaatgac
agcactgtgtatttcagcatccctccggagtccagcgctgccctcaacttcagcatcagg
gacagtggaggccccacggcgagcctggtgctgctgtcccagatacagccgctatcccgc
tccgcatcctccaccctgacgctccacgtgccgctggtcctcagggatgggacgtcgggc
ctcaccagcaccgggacggtcaccgtgtccgtctgtccctgcctgagaggaggggcccgg
gccggggacaaggagaaggacaagcagacggagggcgagtgggactgggaacgagaggcg
gtgtgtctccctcagcagtccacactgccgtcccccgggctcagcaccgccgccctgctg
gccatcctggcttgtgtcgccactctactggcagtgagcgccctgtcattgtcgctgcgc
cggcagaagcgcgactccctgtccccgctggaggaggacgacgtacgtgagaacatcata
acgtatgacgacgagggcgggggcgaggccgacacggccgccttcgacattgccgcgctc
cagagtgccccgcacagctcgcgctcacgtggctatcgcacgttggacagcaggaatgta
cgttacgcccatcaaaaccaagacaaagcccgcacctacagctgggctcagaacccgggc
gtggagcacacctactcaggaccaggaggacccctctatggtcgcctctgttacagcagc
cacaccctaccggtcctccgacgcacgccaggcggagcattcgagccgggcctggcagag
ctggggtaccgctatcccggtggccagccggaccactctctagtcatccagaaccagggg
gccatggtggggccgatggagtccggggcgatatacatagctcccaccgacatcagcacg
ggaagccgaacgggaagccgaacgggaagccgcgacgggaccgcaccccaaagtggggtc
agcacgtcggacggtgggactccgaggacaaacgacagccaggagagaggaggggggatg
gggactgcaagcaactgtacagaggggagcagtgaggacaaagggaaccacagtcaagat
gtggactgggtgcagtcggagacgctacccagggagcatcacctcgtcatgacccgatcc
ggctccatgatgggccagggtcacggcgcaggaggatgggtgtgcgactcgactaccctt
cccttggcgggacgcagggcctcccgctcagggatgtccccgaaacgcaaaggctccggt
caggccgaatctgactccagcggccacggaggaggtggaggaggaggaggaggaggaggg
ggtagtgggaatggaagtgggggtgcctccacagacggacagcagcaacctgccaatgga
cgcaactacgccactgtcctgcagggggagatgtctggacagagggactaccccggcagc
ttggggagaggaggactggagatggggagcaactttgtggtgcctcggggagcgtacggc
ggggtgatgggcttcgggcccggctgggttcccggaatggaggccgcgagaggagccccg
gggcccagcggcccctccctagcactgagggtgggcgagttcctgcgcctgcgtctcgcc
caggtcacctttgacccatcgcagccgccgtacgactctgtgcaggtgtacggcctggag
ggcacaggatcccgtgccggatccctcagctccctcgagagcgaaggggagaaggatgcg
gagaaggaggagtggggggcggggctggaggagtggggcccccagttccagaaattagcc
caactcttcaaagatagggagaaggaaaaggaggagaaggataaagatgaagcaggtgcc
aaaaaggagagtgaaaagaaagacgagccggggaagacggagaagaaagagggaggggag
ccggccggggaagaggggaaagactga
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integrated database retrieval system
