Anoplopoma fimbria (sablefish): 129089785
Help
Entry
129089785 CDS
T09102
Symbol
matr3l1.1
Name
(RefSeq) LOW QUALITY PROTEIN: matrin 3-like 1.1
Organism
afb
Anoplopoma fimbria (sablefish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
HC2
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
129089785
NCBI-ProteinID:
XP_054453126
LinkDB
All DBs
Position
4:complement(25503959..25519611)
Genome browser
AA seq
1893 aa
AA seq
DB search
MSHNYPYRPPPSDSDHRPDHRPDHRPDPGPYGSSDRRHASSDRDFYRPPQESFSPSLPPS
SFSSRGSQWSQDGALSILNSCGLEPADLALLAELPEDVLTVESLPQVLKQIKGKRGTVKP
LTPDNLSPSYSSTSSYTPSSSRRPAVNPTAGAWDPPHNQPLQYPLDQVTPGPLSSDLDRW
GNPRTSSSVTKDIPSLLSPSSFVVDYNYRPGPSDYGKTGRDASPGFSQDYNHRPGPSDYG
KTGRDAGPVFSQDYNYRPGPTAYANAGPVSSQDYNHRPGPSSYGKTGRDASPVSSQDYNY
KPGPSDYCMTGRDAGPVPSQDYNHGPGPSKYGKTDRDTVPASSQDRPSFSSAGRPKRNRP
SRFSQAEPADQRPAPSPKEHHPKTGGERCESRTSSIKSRSAATATAAAAAMPSKKEALDF
HGTSPQGFPYSCSLCDITVMSEKVWIKHINGPHHADGQLSLLQQFPNWDCRMETIIRPDD
QSEKKKDEGKPAQQPQTANQNSSNSQPNKKNQKKTSEKGKVVCVRFPAQSVDEAYLRKLA
EPFGKIVKILMFPSLAFVELGTNDQAKDLVKFHLNHPVTVNGERMEFRISNTFNFLQSSR
VVSFSPAPVGENSQSDLISIIKRFGSPLYTLFLPSKAFVEMKNTPDSQKLVDYYSSRTLM
INNDSIKVSFSGEYKSLMRVTSAKRYEEDTSSTKRTRSSSRENEDNATDTKKRRSSEDRE
KEEEGKKSRDKSSKDRRSRSKSRSRDKSSRDKTNKTRSKSREKSTKEKSTRIKSESRDKS
VEKSSREGRSRSRDKSSKEKATRTRSKSTEKSTKEKSTRIKSESRDKSVERSSRETRSRS
RSREESSSKSSEQNQSREKSVVPEKAEKTDSESRTDPDPAPVKDSKPEAEDKEAIEEEEE
EEESSAEESDIEGMEVIGEDGESLEDEDVETQDEADVEEEEEEEDKMEEDNGPAERLDSP
KEDKKEVKVEEADDQEKVMEIKQEEADDQEKVMEIKQEEANDQEKVTEIKQEATEDGVEE
EEKPIEEEEKAEETRLEEDEEEPDFPIDLENCITLDELGEDQSDDQVEEVRDESESSASR
VVYFTNIPVFPYADADFIRLVKAFGTAERFCRIVGRRAGFIEMSTSSEALRVVKEFKSKP
LTDQGFKVKVHISDKYKTLPNGWSAKLAKDGGKKVSRSQSSSRRRSGRLNMDESNKRKSE
GIEKALNKTPERDSTSKKTQEKESTSKKTQEKSQRLKRPKRKSQRLKRLKKKSQHLKRIW
RKSHRKKTLEKESSSKKTPEKESSSKKTPEKESTSKKTPEKESSSKKTPEKESTSKKTQE
KESTSKKTPEKESSSKKTQEKESSSKKTPEKESSSKKTPEKESSSKKTPEKESSSKKTQE
KESSSKKTQEKESSSKKTQEKESTSKKTQKKESTSKNTPDKDLSIKAPQKVLSKQTPEKD
SLKKTQEEESTSKKTQEEESTSKKSPKKVSSKKTPEEASSEKTPEEELVNQKTSERESTK
TEEKKNLAEEESAAKKAPGKESVCETSPENKGLKRKGNHENDLVPEKKNKKKELTNDERK
KLATHEKEGSTKKNPETDECRDKKSPEMDETENKKSPETDECRDIKSPETELXDKKSPET
DECRDIKSPETDKTENKKSPETDECRDIKSPETDECRDKKSPETDECRDMKSPETDEDKK
SPETDECRDKKSPETDECRDIKSPEXQTSVETKRVQRQTSVETVQRKSPETDECRDIKSP
ETDECRDKKSPETDECRDKTTSEMDTLEDEKSSEVQGETSEPGLKDSESPDQPDSTGDPP
KPQTEQKAAVDRLQDLEATLQVQQPSGPAGSAAELREPTGPVGTEFVRPVVGYFCNLCQV
IYADEDEAKLQHCNTLTHYMKYQEKTGKDPWAS
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacaactacccctacagaccgcctccgtccgactccgatcacagacctgatcac
agacctgatcacagacctgaccccggaccttacggctcttcggaccgccgtcacgcctca
tcggaccgcgacttttacaggccgcctcaggagtccttctccccgtccctcccgccgtcg
tccttttcctccagagggtcccagtggtcgcaggacggcgccctcagcatcctgaacagc
tgcggtctggagcccgccgacttggcgctgctggccgagctgcccgaagacgtcctcacc
gtcgagtcgctgcctcaagtcctcaaacagatcaaaggaaaaagggggaccgtcaaacct
ctcactcccgataatctttctccttcttactcctctacttcctcttacacccccagctcc
tcccgtcgtcccgctgtgaaccccaccgctggcgcctgggatcctccccacaaccagccg
ctccagtaccctctagaccaggtaactccgggtcctctttcatctgatctggaccgctgg
gggaatcccaggacctccagctctgtcacaaaagacataccatcattgctatcgccctcc
agctttgtggtggactacaactacagaccaggaccttctgattatggtaaaacaggcaga
gacgccagtccagggttctctcaggactacaaccacagaccaggaccttctgattatggc
aagacgggcagagacgctggtccagttttctcccaagactacaactacagaccaggaccc
actgcttatgctaatgctggtccagtttcctctcaggactacaaccacagaccaggacct
tccagttatggcaagacaggcagagacgccagtccagtgtcctctcaagactacaactac
aaaccgggaccttctgattattgcatgacgggcagagatgccggtccagtgccttctcag
gactacaaccacggaccaggaccctctaagtatggtaagacagacagagacaccgttcca
gcgtcttctcaggaccgaccctctttcagctctgcaggaagacccaaaagaaatcgtcct
tcccggttctctcaggcagaaccagctgatcaaaggccagctccttcccctaaagagcac
catccaaaaactggtggtgagcgctgtgagtctcggacctcctccatcaaaagccggtcc
gccgccaccgccactgcagccgctgccgccatgccctccaagaaagaagctctggacttc
cacgggacgtctccgcaggggttcccatactcgtgctctctgtgtgatatcactgtgatg
tcagagaaggtgtggattaaacacataaacggacctcaccatgcagacggacagctcagc
ctgctgcagcagtttcctaactgggactgtcgcatggagacaatcatcaggcctgatgac
caatcggagaagaagaaggatgaagggaagcccgcccagcagccccagacagccaatcag
aactcctccaactcgcagccgaataaaaaaaaccaaaagaagacgtcagagaaaggtaaa
gtggtgtgtgtgaggttcccggctcagtccgtggacgaggcgtacctcaggaagctggcc
gaaccgtttggaaagatcgtcaagatcctcatgtttccgtctctggcgtttgtggagctg
ggcaccaacgaccaggccaaggacttggtgaagttccatttgaaccatcctgtgactgtg
aacggagagaggatggagttcaggatctccaataccttcaacttcctccagagttctcgg
gtggtgagtttctctccggctccagtgggagaaaacagccaatcagatctgatcagcatc
atcaagcgctttggatcgccgctgtacaccctgttcctgccgtctaaggcctttgtagag
atgaaaaatactcctgattctcagaagttggtggattattattcctccagaactctgatg
atcaacaatgactccatcaaagtgtccttctctggagaatacaagagcctcatgcgggtc
acttcagctaagaggtacgaagaggacacgtcttcgaccaaaaggacgaggagttcgagc
agagagaatgaagacaatgcgacggataccaagaagaggaggagcagtgaggacagagag
aaggaggaggagggaaagaaatctagagacaagtccagcaaagacaggaggtccaggtct
aagtccaggtccagagataaatctagcagagacaagacgaacaaaaccaggtctaaatcc
agagaaaagtccactaaggagaaaagcaccagaataaagtctgaatccagagataagtca
gtagaaaagtccagcagagaggggcggtctaggtccagagacaaatccagcaaagagaag
gcgaccagaaccaggtctaaatccacagaaaagtccacaaaagagaaaagcaccagaata
aagtctgaatccagagataagtctgtagaaaggtccagcagagagacgaggtccaggtcc
aggtccagagaggaatccagcagcaagtcctctgagcagaaccagtccagagaaaagtcg
gtggtgccagagaaagcggagaagactgactctgaatccagaactgatcctgatccagct
cctgtcaaagactccaaaccagaagctgaagacaaagaagccattgaagaggaggaagaa
gaagaagagtcgtctgcagaggagagcgacatcgaggggatggaggtgatcggagaggac
ggagagagtctggaggatgaagatgtggaaactcaagatgaggccgatgtggaggaggag
gaggaagaagaggacaagatggaggaagacaacggtcctgcagagagactagactcacct
aaagaagataaaaaggaggtgaaggttgaagaggctgatgatcaggagaaagtgatggag
ataaagcaggaggaagctgatgatcaggagaaagtgatggagataaagcaggaagaggct
aatgatcaggagaaggtaacggagataaagcaggaagcgacagaagacggggtggaagag
gaggagaaacctattgaggaggaagaaaaagcagaggagactcggctggaggaggacgag
gaggaaccagatttcccgatagacctggagaactgcatcacactggatgaactgggagaa
gaccagtctgatgaccaagttgaagaagtccgagacgaatctgaatcttcggcctcccga
gtggtttacttcaccaacatccccgtgtttccctacgccgacgccgacttcatcaggctg
gtgaaagcttttgggacggcggagagattctgtcgcattgtcggacgcagagcgggtttc
atcgagatgtcgacttcctctgaggctctgagagtcgtgaaagagtttaaatctaaacct
ctcaccgaccagggcttcaaagtcaaagtacacatctccgacaaatacaagacactcccc
aacgggtggtcggctaagttggccaaggacggagggaagaaggtcagcaggagtcaaagc
agcagcaggaggaggagtgggagactaaacatggatgaatctaataagaggaagtccgag
gggatcgagaaggccttgaataagactccagaaagagactcaacgtctaaaaagactcaa
gaaaaagagtcaacgtctaaaaagactcaagaaaagagtcaacgtctaaaaagacccaag
agaaaaagtcaacgtctaaaaagactcaagaaaaagagtcaacatctaaaaagaatctgg
agaaagagtcatcgtaaaaagactctagagaaagagtcatcgtctaaaaagactccagag
aaagagtcatcatctaaaaagactccagagaaagagtctacgtctaaaaagactccagag
aaagagtcatcatctaaaaagactccagagaaagagtcaacgtctaaaaagactcaagag
aaagagtctacttctaaaaagactccagagaaagagtcatcgtctaaaaagactcaagag
aaagagtcatcgtctaaaaagactccagagaaagagtcatcgtctaaaaagactccagag
aaagagtcatcgtctaaaaagactccagagaaagagtcatcgtctaaaaagactcaagag
aaagagtcatcgtctaaaaagactcaagagaaagagtcatcgtctaaaaagactcaagag
aaagagtctacttctaaaaagactcaaaagaaagagtcaacgtctaaaaacactccagat
aaagacttgtctataaaggctccacagaaagtattgtctaaacagactccagaaaaagac
tctttgaaaaagactcaagaggaggagtcaacgtcgaaaaagactcaagaggaggagtca
acgtcgaaaaagagtccaaagaaagtatcgtctaaaaagactccagaggaagcctcatct
gaaaagactccagaggaagagttggtgaatcaaaagacttcagaaagagagtcaacaaag
actgaagagaagaagaatttagctgaggaggagtctgctgctaaaaaagctccgggaaaa
gagtccgtctgtgaaacgagtccagaaaacaaagggttaaaaagaaaagggaatcatgag
aacgacttggtgcctgaaaagaaaaacaagaagaaggagttgacaaatgatgagagaaaa
aagttagcgacccacgagaaggaaggatcaacaaagaagaatccggagacggacgagtgt
agagacaaaaagagtccagagatggacgagactgaaaacaaaaagagtccagagacagac
gagtgtagagacataaagagtccagagacagagctgtaagacaaaaagagtccagagaca
gatgagtgtagagacataaagagtccagagacagacaagactgaaaacaaaaagagtcca
gagacagacgagtgtagagacataaagagtccagagacagacgagtgtagagacaaaaag
agtccagagacagacgagtgtagagacatgaagagtccagagacagacgaagacaaaaag
agtccagagacagacgagtgtagagacaaaaagagtccagagacagacgagtgtagagac
ataaagagtccagagnnacagacgagtgtagagacaaaaagagtccagagacagacgagt
gtagagacagtccagagaaagagtccagagacagacgagtgtagagacataaagagtcca
gagacagacgagtgtagagacaaaaagagtccagagacagacgagtgtagagacaaaacc
acttcagagatggacacacttgaagacgaaaagtcatccgaagttcagggggagacatct
gaaccaggactgaaggattcagagagtcctgatcaaccagactctactggagatcctcca
aaaccccagactgaacagaaagctgctgttgatcggctgcaggacttggaggctacgctc
caagtgcagcaaccatctggacctgcagggagcgctgcagagctacgagaacccaccgga
cctgttggaacagagtttgttcgtccggtcgttggttacttctgtaacttgtgtcaggtg
atctacgccgacgaggatgaagccaaactgcagcactgcaacaccctgacccactacatg
aagtaccaggagaagacaggcaaagatccgtgggcgagctga
DBGET
integrated database retrieval system