Anoplopoma fimbria (sablefish): 129089901
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Entry
129089901 CDS
T09102
Name
(RefSeq) protocadherin beta-16-like
Organism
afb
Anoplopoma fimbria (sablefish)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
7TM_GPCR_Sri
GpcrRhopsn4
Init_tRNA_PT
Motif
Other DBs
NCBI-GeneID:
129089901
NCBI-ProteinID:
XP_054453292
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Position
4:13230768..13233167
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AA seq
799 aa
AA seq
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MRRQVLLFISILSFSSVFGQVSYSIPEEMAKGSLVGNIAQDLGLDVKRLKLGNARVYSGD
SREYIELNSERGVLLIKERIDREALCGDTTPCAVHFQIVLENPMEFYSVTVEITDVNDNA
PSFEKSDIKFRISESAVVGAKFVLERAVDLDVGINSLQSYVLKPSDNFLLKLHNQADGSK
NVEMVLQKSLDREKNELISLALTAVDGGEPQMSGTMQILITVLDANDNAPVFTQPIYKGS
VAENSATGTIVTTVSASDADHQLNGKVTYSITNTFDDVRHMFDVNEDSGEVRLTGHLDYE
KKRNFQINVRAMDNGGLTDSCKVIVDVIDINDNEPLIKIMSKSAIISESANPNTVVTMIN
IQDPDSDENGKVQCFINENIPFILKSSSNNFYSLVTDSDLDRERSSDYNITVTCSDEGEP
SLSSSVTLTLQISDVNDNAPVFERSSYEAYIVENNTPGLSIFTVKARDADWNQNARVSYI
LEDSSVNGVPVSSYVSVSADSGVIHAVRSFDYEQIKDFHFRVKAQDGGSPPLSSNVTVKV
MIQDQNDNPPQVLYPVQTGGSLVAEMVPRSADVGYLVTKVVAVDVDSGQNAWLSYRLQKA
TDRALFEVGLQNGEIRTIRQVTDKDAVKQRLTVIVEDNGQPSRSATVIVNVAVADSFPEV
LSEFTDFTQDKEYNDNLTFYLVLALAVVSFLFITCLVVIISVKIYRWRQSRVMYHSNLPV
IPYYPPRYSDTLGTGTLQHVYNYEVCRTTDSRKSDCKFGGAGSQNVLIMDPSSTGTMQRI
QSERSILDEPDSPLEVSTF
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgagacggcaagtactgttgtttatctcgatcctctcttttagttcggtctttggccag
gtcagctactctattccggaggaaatggcgaaaggctctttggttggtaatatcgctcag
gatttaggtttagacgttaaacgactgaagttgggcaacgctcgtgtttattctggtgat
agcagagaatacatcgagctgaatagcgaaagaggagtcctccttatcaaagagagaata
gacagagaggcgttgtgcggtgatacgaccccgtgtgctgtgcattttcagattgtgtta
gagaatcctatggaattttacagtgtaacggttgaaattacagatgttaacgataatgca
ccgtctttcgaaaaaagcgacattaaattcagaatcagcgagtctgcagttgtcggggcc
aaatttgttttagaaagagcagtggatttagatgtaggaataaatagtcttcaaagctac
gttctcaagccaagtgataattttttacttaaactgcacaaccaagcagatggttcaaag
aacgttgagatggtcttacaaaaatctctggacagggagaaaaacgagttaatttctctg
gcgttgacggctgtagatggaggagaaccacagatgtcgggaacaatgcagatcctcatc
accgtgttagatgccaatgacaatgcgcctgtttttacacagcccatatataaaggcagt
gtagcggaaaatagcgcaacgggcacgatcgtgaccactgtcagtgcttcagatgctgat
catcaattaaatggcaaagtaacatactcaatcacaaacacgttcgatgacgtcagacac
atgtttgacgtgaatgaggacagcggtgaggttaggttgactggacatttggattatgaa
aagaaacgaaactttcagataaatgtacgcgcaatggataacggggggctaactgattct
tgtaaagtgatagtcgatgtcatcgatataaatgataatgaaccactgattaaaatcatg
tctaaatcagctattatatcagagagtgcaaaccctaatacagtcgttacaatgattaac
atccaagacccagactcagatgagaatggtaaagttcagtgttttataaatgagaatatt
ccttttatcttgaaatcatcctcaaataatttctatagcttggtaacagacagtgattta
gacagagagagatcctcggattataatataacggtgacctgctctgatgagggagagccc
tccctctccagcagcgtcactctcaccttacagatctctgatgtgaatgataacgcgcct
gtctttgagaggagctcatatgaggcctacattgtagaaaacaacacaccaggtctctct
atattcacagtgaaagccagagacgctgactggaaccagaatgcccgtgtttcttacata
ctggaggactcctctgttaacggagtgccagtctcctcatatgtgtccgttagcgctgat
agtggagtcatccatgcagtgcgctcttttgactacgagcagatcaaagatttccacttc
cgtgtcaaagctcaggatggaggctcccctccactcagtagcaatgtgactgtgaaagta
atgatccaggaccagaacgacaaccctcctcaggttctgtacccagtccagactggtggc
tctctggtggctgagatggtgcctcgttcagcagatgtgggctatctggtcactaaagtg
gtggctgttgatgtggactctggacagaatgcctggctctcctatagactgcagaaagcc
acagacagggcgctgtttgaagtgggcttacagaatggagaaataagaactatccgccaa
gtcactgataaagatgctgtgaaacaaagactgactgttatagtggaggacaacgggcag
ccctctcgttcagctacagtcattgttaacgtggcggtggcggacagcttccctgaagtg
ctgtctgagttcactgactttacacaagacaaggagtacaatgacaacctgactttctac
ttagtgttggctttggctgtagtttccttcctcttcatcacgtgtttagtggttattata
tcagtgaagatctacaggtggagacagtctcgcgtcatgtatcactccaatctccctgtg
attccgtattatccaccacgttactcagacactttggggacagggactctccaacacgtg
tacaactacgaggtgtgcaggacgactgactccagaaagagtgactgtaagttcggcgga
gccggtagtcagaacgtgctgataatggaccccagttctacagggacgatgcagcggata
cagagtgaaaggagcatcctggatgaaccagactctcctctagaggttagcactttctag
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