Anoplopoma fimbria (sablefish): 129090523
Help
Entry
129090523 CDS
T09102
Symbol
aff2
Name
(RefSeq) LOW QUALITY PROTEIN: AF4/FMR2 family member 2
KO
K15194
AF4/FMR2 family member 2
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129090523 (aff2)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
129090523 (aff2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Rsm1
Motif
Other DBs
NCBI-GeneID:
129090523
NCBI-ProteinID:
XP_054454146
LinkDB
All DBs
Position
4:5583443..5697933
Genome browser
AA seq
1555 aa
AA seq
DB search
MTSPTFDIDMAKLRKLSSGVGSQRPEEEGVGEEEQEVQQDEDLFSTGFNLFGEPYKTNKG
DALASRVQNTLGSYEEMKDLLTSHSNQSHLVGIPKGSNNLQTPTTTLTTERPAMETQLFS
EALRGGTGGGGGGGGAEVGGDKRMANASSSSSTSMQPPAATTSSTAIAHQNSKKSRSSMD
WSRAGQGQSAQGGGLVLGLSTNGTGPVTAATSGRGKMSLLEEQQMQRHDELFSSLKDELG
LKGDSSPSSSSSSSSSSSSSGRRHSSHPSKTLPDGGNFRSSTMDAGHFKSSTNTENGGHF
KSSPFENETSSHLSTASSPLASTSVLTTPTPGLTTPTSGLTTPTFPPGSLSGKPIAIQQK
PTAYVRPMDGQDQVPSDSPQLKPPVVATEGFNNSQTYGGNAGNAKNKLPKLSLSHTGEVS
LPNDSSCVEEILREMTHSWPPPLTAIHTPGKADQTKFPIPNKESQHVTSGYNTQKRCTVS
ANKPAAKPPTAPQKSMLEDDLKISSDEEEAEQQVSDKPKARSTAISGASGSSSESESSSE
SDTDESESSSSDSEYNQASRTHTPEPEPPSANKWQLDSWLNKVQAQTKPLVPPQPEHGTG
SITQGPGTFSPRIEAPGVGTAAKTKPCISNSTPVPAAQTVEHKDTRGAFCPGREKAKAKL
SQKTSGEGQRSKMRMSPGLLSAPEVTTQRRNTTGKKQPRRTERSNSVEDSQSQTWSRTNQ
HSPAAREKDLLPPPPWSYRTPXRPRSKPPSGKTAPRKEPRSATNSNSSSVTPPAALQQPP
VPIPAVSVNQDKRKHRGPNTKITPKSREFIETDSSSSSSECHSDPEEALKTPALPPQTTR
SAINTQTLTNTHTHTPPLPPCLSSAGSLGTFGGKGLRVKDSGSVTANGSSSSNSSITSGN
NVSSSSCNTLSISNISGVFGTSVPDPGGLGGQRKDPVSMSPPPNVRHDVPPSPLREYQEI
QSLWVKIELSLLGRVPGQGSGEKSRAGLAERDGSEGRERERQGERMGATEREKQKQAERE
WPGLRERQKPPKGEKQEEENERLAQDRGRQGERDRLTERERQTDREDRDRSGLGERERTT
GKDREKACQGPGVLDIPPVQEQSNPRLAGRTESKHRRQAAGNTAVPTEKHTNKSKRKHKS
DHTESSVNGNKKLRLDKDCQLLPPCISPIHNHKNSSADSSLNRKQSRRREDKLLPPLLSP
LSDDPPRKRTCDSSSSLSQEGIVPPTMPCSTSSTSSSSSSHRHRRGEGKASAHTRNGSEV
DTHGEKPNGDGYHANGQSDSEVWSEPTMDPAEPRRPRLTFSDTVHCADYYMQEAKRLKHK
ADALMDKFGKAVNYADGALSFIECGNAMERDPLEAKSPYTMYSETVELIRYAMRLKNFTS
HSATVAEKKLAVLCNRCLSLLYLRMFHLKKDHAVKYSRSLMEYFKNSAKSSHQEPSPWRI
NGKVNGTPSPLSLSPSPAGSGGAGGGSGGAPGSSGSVAIPQRIHHMAASHVNITNNILRS
YEHWETADRLATDSQEFFQELDSVMEPLSQQSSMTELVRYIRQGLHWLRLEAHLL
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgccaaccttcgacatagacatggctaaactgcgtaagctatcatctggagtc
ggatcgcagcgccctgaagaggagggagtgggagaggaggaacaggaggtgcaacaggat
gaagacctattctcaaccggattcaacctgtttggagaaccttacaaaactaataaaggt
gacgcgttggccagtcgcgtccagaacacgctgggttcctacgaggaaatgaaagacctg
ttaaccagccactctaaccagagccacttggtgggaatccccaaagggagcaacaacctg
cagacccccaccaccacgttgacgacggagagacccgccatggagacccagctttttagc
gaagccctgagaggagggacaggtggagggggaggaggaggaggagcagaggtaggtggg
gacaagaggatggcaaacgcgtcctcctcatcttcaacttccatgcagccgcctgccgcg
accacgtcgtcaacagcaatcgcacatcagaattcgaaaaagtcccggagctccatggac
tggtcgagggcaggccaaggacagagcgcccaggggggaggccttgttctgggattatca
acgaacgggacgggaccggtcacggcagccacgagtgggagagggaaaatgtctttacta
gaggaacagcaaatgcaaaggcatgacgagctgtttagctcactcaaagacgaactcggc
ctcaaaggcgactcaagcccttcttcctcctcttcgtcctcctcttcctcgtcttcttcg
gggagaaggcactcttctcacccctccaaaacccttcctgatggtggcaatttccgatct
tccaccatggacgctggccatttcaagtcttccaccaacacagaaaatggtggacatttt
aaatcctccccgtttgaaaacgagacaagctcccacctctccacagcctcctccccgctg
gcttccacgtcagttctgacgacgcctacccctggtctaaccactcccacgtctggactg
accacacccaccttcccacccggcagcctatcggggaagcctatcgccatccagcagaag
cccacagcgtacgttcgaccgatggatggccaggaccaggttcccagtgactctccccag
cttaaaccccctgtagtggccacagaggggttcaacaacagccagacttacggaggaaac
gctgggaatgccaagaataaactgccaaaactgagtctcagccacacaggagaggtcagc
ctaccaaatgactccagctgtgttgaagagattttgcgggagatgacccattcctggcct
cctcccctcacagccatacacactcctgggaaggccgatcagaccaagttccccatcccc
aacaaggagtcacagcatgtgacctcaggctacaacacccagaagcgatgcactgtgtca
gctaacaagcctgctgcgaaaccaccgactgcaccacagaaatccatgttggaggatgac
ctgaagatcagcagcgacgaggaagaggccgaacagcaggtgtctgacaagcccaaagcc
agaagcacagcaataagtggagcatcagggagcagcagtgaatctgagagcagctcagag
tcggacacagacgaatcagagagcagctccagtgacagcgagtataatcaggcctcgcgc
acacacactccagagcctgagcccccctctgccaacaagtggcagctggacagctggttg
aataaggtccaagctcaaaccaaaccccttgttcccccacagccagagcatggcacaggc
tcaatcacccagggtccggggactttttctccaaggattgaagcaccaggagtgggaacg
gccgccaagaccaagccctgcatatccaacagcacccctgttccagcagcccaaacggtg
gaacacaaggatacaaggggagctttctgcccaggcagagagaaggccaaggccaagctc
agccagaagacatcaggggagggccagaggtcaaagatgaggatgtcaccgggcctgttg
tcagcgccggaggtcacgacccagaggaggaacaccacagggaagaaacagcccagacgg
acggagaggtcaaacagtgtggaggatagtcagagccagacgtggagcagaacaaaccag
catagccctgcagctagggagaaggacctgttgcctccccctccttggagctacagaacc
cccnngaggccacgaagcaaaccccccagtgggaaaacagcccccaggaaagaaccacgc
agtgctaccaactcaaacagcagctcagttactccaccagcggcgctacagcaacccccc
gtgccaatacctgctgtcagtgtaaaccaggacaagaggaaacacagaggtccaaacacc
aaaatcacacccaagtcccgcgagttcatcgaaacggactcctcctcctcgtcctcagaa
tgccactcggatccggaggaagccctcaaaacccccgcgctgccgcctcaaacgacgcgc
tcggccatcaacacgcagactctaaccaacacacacacgcacacgcctcctctcccacca
tgcctcagctctgcggggagcctgggtactttcggagggaagggactccgagtcaaagac
agtggcagcgtgaccgctaatggtagcagcagtagtaacagtagcatcaccagtggtaat
aacgtcagcagtagcagctgtaacaccctaagcataagcaacataagtggtgtatttggc
acttctgttcctgaccccggagggttaggaggacagcgcaaagacccggtgtccatgtca
ccacctcccaacgtcagacacgacgtgcctccgtcccccttgagggagtaccaagagatc
cagagtttatgggtgaaaatcgagctgagtctgctcggcagggtgcctggccagggttcg
ggggaaaaatccagagcgggactggcagaaagggacgggagcgaggggagggagagggag
agacagggggagaggatgggggcgaccgagagagagaaacagaagcaggcagagagagag
tggccggggctgagagagaggcagaagccacctaaaggagagaaacaggaggaagaaaac
gagagattggcacaggacagagggaggcaaggtgagagggacagattaacggagagagag
aggcagacggacagagaggacagagacagatcagggcttggggagagggaacggacgacg
gggaaggacagagagaaggcgtgccaaggtccgggggttctggacatcccccctgtgcaa
gagcagagtaatcccaggctggcagggaggacggagagcaaacacaggaggcaggccgct
ggaaacacggccgtcccaacagagaaacacaccaacaagagcaagaggaaacacaagtcg
gaccacactgagtcgtcagtcaacggcaataagaagctgcgattggacaaagactgtcag
ctcctcccaccatgcatctctccgatacacaaccacaagaacagctctgcagatagctca
ctgaacaggaagcagtccagacggcgtgaagacaagctgcttccccccctcctgtcgccg
ctctctgacgatccacctcgtaaacggacctgtgacagcagttcctctctcagccaggag
ggcatcgttccgccgacgatgccctgctccacctcctccacttcctcttcctcttcctca
cacagacacaggagaggggaaggcaaggcgtcagcacacacgaggaacggcagtgaagtg
gacacccacggcgagaagcccaacggagacggttaccatgccaacggacagtcagactca
gaggtgtggtcggaaccaacgatggatcccgcagaacctcgcaggccacgactgacattt
agcgacacagtgcactgtgcagactactacatgcaggaggccaagagactgaagcacaag
gccgatgctttgatggacaaatttggtaaagcggtgaactacgcagacggagccctgtcc
ttcatagagtgtggaaatgctatggagcgagatccactagaggccaagtcaccgtatacc
atgtactctgagactgtggagctgatcaggtatgccatgaggttgaagaacttcaccagc
cattcagccaccgtcgctgagaagaagctagctgtgttgtgtaaccgctgtctgtctctg
ctgtatctgaggatgttccatttgaagaaagaccacgctgtcaagtactcgcggtcgctc
atggagtacttcaagaattcagccaagagttcccaccaagaaccctctccctggaggatc
aatgggaaggttaacgggaccccgtctcccctctcactcagcccctccccagccggcagt
gggggagcagggggaggatctggaggagccccgggctcctcaggaagtgtggccattcct
caacggattcaccacatggctgccagtcacgtcaacatcaccaacaacatcctgcggagc
tatgaacactgggagacggctgacagactggccactgatagccaagagttcttccaggag
ctggactcggtgatggagccgttgagtcagcagagcagcatgacggagctggtccgatac
atcaggcagggactgcactggctccgcttagaggctcacctgctgtaa
DBGET
integrated database retrieval system
