Anoplopoma fimbria (sablefish): 129091672
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Entry
129091672 CDS
T09102
Symbol
srcap
Name
(RefSeq) LOW QUALITY PROTEIN: helicase SRCAP
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129091672 (srcap)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129091672 (srcap)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
129091672 (srcap)
SWR1 complex
129091672 (srcap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
129091672
NCBI-ProteinID:
XP_054455342
LinkDB
All DBs
Position
5:9262151..9290061
Genome browser
AA seq
2973 aa
AA seq
DB search
MQRPPAPLCPPLATDTQIDSTVQELQHGSQTDKEKHPSNSQTDQIQTPREGAGIVVVTGT
KEKRSITLDYKPETGTKVEFGGKEHMGGNIHLQPKSQIRFTSPSVSQSSVGFRDTAEHGA
LDPLVHANPESHIPPPVFAVQAGGHQDSKPPPLPLSGNSEIKQTDLSRTQPKIIKETSTD
AGEMQKANSLEIFEHVKEIVDASDRERQPPSAEILETGKARESLPGLYAAPGTGSSVSSR
EQLEGERLESSVREEQTDTSSSDFTTLPECSFTQESSSKPSDAPVLVDTDLVSLPAETSH
PPDQVPATETPPTTELMHSAEAHEIVVVREEAHIGGGWTNLHLNQSYLLQREDGSVCEAA
IVNELSSDLSGGEPKLYEESVQADVEMETQAVEVYEFCTVVEEVAEETVCASSSVQMPHS
PGYEVNLFNALLEHSEEYTVKEDLEPSITTITESGTVIISQQPLPVSNDSNQVQSNSNSH
NLSVQNMRAAAVGQHLVLEANQAVEVANSSEVCLVEVAAFTSDSFSEMVTSQVSAGLSDQ
TEVTDSPVTQTNPPKQEASVAVSVNVQPALSQTAVSATKLKASVSSPEGTKAAPALTETP
SQSIQNVAAPAETTPGALCTTRPSGIINPKLLLLKPGETPVLKHPPSLLAPASKQQHSVG
KLANAHSSWSGSVSEECLPQTVSDSLCASEALGDRKDQTQCSVDKTSVSAAPSVKVQQPD
SLHLDQTASVSTKTSTIKPDNEALTLTKTSSEADVVTITGATTPKALYVLQASVEREGAV
MASTSISDPVSLAGSTYEEEESEDMEQDEATGETEVQEATSGQISSPEEGSDEEPDADKT
ESEMTPSSPCKHGQSRTDRQTLFLKVRQWIADRVTANSSPVSPSTSSSYPGPSPASDWST
QRRDKSSPLRGPHGKFVSPGAVGGYSTSSSPPDQATPQRPRGERHTDMAELAKHEADIEH
RTQALRREGFWSTKRLTRLTEPPRPKVQWDYLCEEMQWLSADFAQERRWKRGVARKVVRM
VMRHHEELRQKEEKAKRDEHSKIRRVASSIAKEVRAFWSSVEKVVQYKQQSRLEEKRKKA
LDLQLDFIVGQTEKYSDLLSKSLAPSRPAEPEPVPQTPIKPVTPATDEDDRDFEPPCEEE
DDEETIEVEEQQEGNDAESHRREIELLKEEGLLPLDQLLSTLKLPQESGSDGESSDESSS
SVEEEDGEFTANEEDAKDEEDTIDAQEKVEGNVDHAEELDDLAKEGDMSVEELLEKYKGA
YASDFEAPSASGSKDSSDSEESGDEEEETEEDESDVESNSSSSDSQGDSGEEEDSENDEE
ESEEEDDGCGDEGMEVLLKEGDNSPPSSSTRPKKEISHIAATAESLQPKGYTLATTKVKT
PIPFLLHGTLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIALLAHLACEKGNWG
PHLIIVPTSVMLNWEMELKRWCPGFKILTYFGSQKERKLKRQGWTKPNAFHVCITSYKLV
LQDHQAFRRKSWRYLILDEAQNIKNFKSQRWQSLLNFNSHRRLLLTGTPLQNSLMELWSL
MHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRIKIDVEKQ
MPKKYEHVVRCRLSKRQRFLYDDFMAQASTRETLASGHFMSVINILMQLRKVCNHPNLFD
PRPIQSPFITKPIVFHTASLVQDALEVSPLKRCDLSMFDLVGLESRVSRYQADVFLPRNK
VSRQLIQEIVESPEPLPRPRPVRMKVNRMFQPPPKSDNRPVLLMNKPTCSVPPAAQTPKP
QTVTEVPLTPQPAPVVQQVVCTVATVTPPRPSMHPTAQIAVRSSGPKPVLTVRPPTASCA
AGVPAHPSPNPGSVLPQRVLLSPDMQARLPSGEVVSIAQLASLAGRPVSSCQGSKPVTFQ
LQGNKLTLSGAQIHQVPAASPRPVQGNVMHLVSSGVQHHLISQPAQVAVQSNTTSTAPPT
NRLPHNASAQVTPTMVSSPGVVKIVVRQTAGKDGGPVPTLAVAPSPRVVPQTSPSPHPHA
TTTPVRTTAPLQIAQRTPGPATAHYTIAPPGNPSSTPNQPHPPRPVLKVVQPPPPNTEQP
ALVQVASSSSASSKSPAAARDGGSSSQTAVTTKSRPSTSVKAFPPHRRVPRPPPRSPFHM
KWLADSFKQERDSRLDFIIRANENRCAAKPMYGREVLDFLTFLPGSRPSPAALRPQREWG
RSGHSSALYSQWQNKYDFWFQSRAVREAIHSVDDRLELLKEIVDRFTFAIPPVAAPQISM
HCCHPPPSLNNKQVVFSSQLSTQVTPLTRSLHRIQCYMRTQFPDLRLIQYDCGKLQTLHT
LLRKLKTXGHRVLIFTQMTRMLDVLEQFLNYHGHIYLRLDGSTRVEMRQSLMERFNADRR
IFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISER
TVEENILKKANQKRMLGDMAIEGGNFTTAFFKEQTIRELFDMNDGEKREVAVELSVPQAE
EEEAVNKQSTTILEQALCRAEDEEDIVAASQAKAEQVAELAEFNENIPLDDGGEQEEVEE
LSKAEQEIAALVEQLTPIERYAMNFLEASLEDVCKEELKQAEEQVEAARKGLDQAKEEGL
KLHASSDENDDDFLSPTASVEPAQPARRGRKPKDKDRNVTSTRTSGRLRGASPEPEPEPE
PAREVPERLRCGLRGRGAAKDTGTVSTTPSRTDHQKTSSSTKLQDSSKTSPVRDHQTSKT
RTLPNRSHPSPVPSPPTTSPPGGKQQCAGETDGKTSKACREDKGGENEKRASESSLETGC
PVDQQAKDEDGKDNSAMSPPPPAPDRPASVSQQTVKSYGAWLKTPRRPKSCGSFRGGWSR
WWRRRSQGGGGGEEAALEVGLLQRRQPWRRALPGPSTKQTKTTHRQAPTAKPKGPLPNPL
RTRSLLLVRLCIRRLSGVILHILHPIFLRTCPC
NT seq
8922 nt
NT seq
+upstream
nt +downstream
nt
atgcagagacctccagctcccctttgtccccctctcgccacagatacacagattgacagc
acagtgcaagagctgcaacacgggtcacaaactgataaagagaaacacccctcgaatagt
cagacagaccagattcagacacctagagagggggcaggaattgtggttgttacggggact
aaggagaaacggtccatcacgttggattataaaccagagactggaacaaaagtggaattt
ggtgggaaagagcacatgggcggaaatattcacctccaacccaaatctcaaatccgcttc
acatctccatctgtctcacaatcaagtgttgggtttagagacaccgcagaacacggggct
ctggacccgcttgtccacgcaaatccagagagccacatacctccgccggtttttgcggtg
caagcagggggtcaccaggactcaaaaccgcctccgctccctttatcgggcaacagtgag
attaaacaaactgacctgtcaagaacacaacctaaaatcatcaaagagacctcaacggat
gccggagagatgcaaaaagcaaactctttggagatattcgagcatgtcaaagagattgtt
gacgcgtctgacagagaacgacaacctccctcagctgaaatacttgagaccggaaaggcc
agagagtcgcttcctggattatacgctgctcctggaacaggaagctcagtgtccagcaga
gaacaactggaaggagagcggttggagagtagcgtgagggaagagcaaactgacacctcc
tcgtccgacttcacgactctgccggagtgctctttcacgcaggagagttcctcaaaaccc
tccgatgcgccggtcctggttgacacggacctggtctcactgccggcggaaacatctcat
ccccctgaccaagtccccgcaacagagacgccaccgactaccgagctcatgcactcagcc
gaggctcatgaaatcgtggttgtcagagaggaggctcacatcggcgggggctggacaaac
ttgcacctgaatcagagttacctcctgcagcgggaagacggcagcgtctgtgaggccgcc
atcgtcaacgagctgagttctgacctctctggcggggaaccaaagctgtacgaagaaagt
gttcaggcggacgtcgagatggaaacgcaggccgtcgaagtgtacgagttctgcaccgta
gtggaggaggttgccgaggagacggtgtgcgccagtagtagcgtgcagatgcctcactct
ccaggatacgaggtgaacttgttcaacgcgttgctcgaacactctgaggaatacaccgtc
aaagaggacctggaaccatctattaccacaattacagaaagtggcactgtcattatttcc
cagcagcccttgcctgtatcgaacgattcaaatcaagtacagtcgaacagtaattcccat
aatttgtccgtacaaaacatgagagcagctgctgtcgggcagcatttggttttggaagct
aaccaagctgttgaagtggcaaactcaagtgaggtttgtttagttgaagtagccgctttc
acatcagactcattctcagaaatggtgacatcacaggtcagtgcaggcctctcggaccaa
acagaggtaacagattctcctgtaactcaaacaaatcccccaaaacaggaagcgtctgtt
gccgtctctgtaaacgttcagcccgctctcagtcagactgctgtaagtgccacaaagctt
aaggcctctgtttcgtcacctgaagggaccaaagccgcccctgctttgacggagactcca
tcacagagtatccagaatgttgctgcacccgcagaaaccacaccaggggctctctgcacc
acccgcccctctggtatcataaatccaaagctgctccttctcaaaccgggagaaactccc
gtcctgaaacaccctccctcccttttggcaccggcctccaagcaacagcattcggtcggc
aagctggccaatgcccacagctcttggtctggcagcgtgtctgaggagtgccttccccaa
accgtctcggactctttatgtgcgtctgaggctctcggcgaccggaaagatcagacgcaa
tgctccgtcgataaaacttctgtgtcggcggcgccgtctgtcaaggtgcagcagcccgac
tcgcttcatctcgaccagactgcatccgtctccaccaaaacgtcaacgatcaaacctgac
aacgaggccttaactcttactaaaacttcaagtgaagcagatgtcgtcaccattacaggt
gctacaacgcccaaagccctttacgtgctccaagcatcagtggagagggaaggtgctgtc
atggcgtccaccagtatcagtgaccccgtcagtctagcgggctccacctatgaggaggaa
gagagcgaggacatggagcaggacgaagcgacgggagaaaccgaggttcaggaggccact
tcgggacagatcagcagtccagaggaaggcagcgacgaagaaccggacgcagacaaaacg
gaaagcgagatgacccccagctctccatgcaagcatggacagagcaggacagacagacag
acactgttcctcaaggtacgccagtggatagcagacagggtcacggcgaactcatctcct
gtctcgccctccacttcctcttcttaccccggcccctcacccgccagcgactggtccacc
caacgacgggacaagtcctcacctctccgagggcctcacgggaagtttgtctctccgggc
gccgtcgggggctacagtacctcctcgtccccgccggatcaggccacgcctcagcgaccc
cgtggggagcgccacacagacatggcagaactggctaaacatgaagcagacatcgagcat
cggacccaggcgctgaggcgagagggcttctggtcgacgaagcgtctcacccgcctgacg
gagccgccgcgacccaaagttcagtgggactacctgtgtgaggagatgcagtggctctcc
gccgactttgctcaagagaggcggtggaagagaggggtggctagaaaggtggtgcggatg
gtgatgagacaccacgaggagctgaggcaaaaagaagaaaaggccaagagagacgagcac
tctaagatcaggagagtcgcctcttctatcgcaaaggaggtccgggctttctggagcagc
gtggagaaggtggtgcagtacaagcagcagtccagactggaggaaaagaggaagaaggct
ttggaccttcagctggacttcattgttggccagacggagaaatactcggacctcctcagc
aagtcactggctcccagccggcctgctgaaccggaacctgtccctcagactcccatcaaa
cctgtgacacctgccactgatgaggatgacagagactttgagcctccctgtgaggaggag
gatgacgaggagaccatagaggtggaggagcagcaggagggcaatgatgctgagagccat
cggagggagattgaactgctgaaggaggaaggcctgctgcccctggaccaattactgagc
accctcaaactgccacaggagtcgggctcagatggtgaatcctctgatgaatcctcttca
tcggtggaggaggaagacggtgaattcactgccaatgaagaggatgctaaggatgaggag
gacaccatagatgcccaggagaaggtcgagggaaatgtggatcacgcagaggagctggat
gacttggccaaagaaggcgacatgagcgttgaggagttgctggagaagtacaaaggagcg
tacgcatcagactttgaggcgccgtctgcttccggttctaaagacagctccgactcagag
gagtctggggatgaagaggaggagactgaggaagatgagagcgatgtggaaagcaacagt
tcctcctctgattcacaaggagacagtggagaagaggaggacagtgagaacgacgaggag
gagagtgaggaagaggatgacggctgtggggatgaagggatggaggtcctgctgaaggag
ggagacaacagcccgccgtcctccagcacacggccgaagaaagagatcagccacattgct
gcgactgcagagagcctgcagcctaaaggatacactctggctactaccaaggtcaagacc
cccatcccgttcctgcttcacggcacgctgcgagaataccaacacatcggactcgactgg
ctggtcaccatgtacgagaaaaagcttaatggcattctggctgatgagatgggtctgggc
aagaccatccagaccatcgctctgctggctcacctcgcctgtgaaaaaggtaactggggc
cctcacctcatcatcgtccccaccagtgtgatgttgaactgggagatggagctgaaacgc
tggtgtcccgggttcaaaatcctcacttactttggcagccaaaaggagcgaaagctaaag
agacagggctggacgaagcctaacgctttccacgtgtgcatcacttcctacaagttggtg
ctgcaggatcaccaggcgttccggcgaaagtcctggcgctacctgattctagacgaggcg
caaaacatcaagaacttcaagtcccagcgctggcagagtctgctgaacttcaacagccac
cggcgactgctgctgacgggaactcctctccagaacagcctgatggagctctggtctcta
atgcacttcctcatgccgcacgtcttccagtcccaccgcgagttcaaagagtggttctcc
aacccgctgacgggaatgatcgagggcagccaggagtacaacgagggcctggtgaagagg
ctccacaaggtgctgaggccgttcctgctccggaggatcaagatcgacgtggagaagcag
atgcccaagaaatacgagcatgtggttcgctgccgactctccaagagacagagattcctc
tacgatgacttcatggcacaggcctcgacccgggaaacgctggccagcggtcacttcatg
tctgtgattaacatcctcatgcagctccgcaaagtctgcaaccacccgaacctgttcgac
ccccgacccatccagtctcccttcatcacgaagcccatcgttttccacacagcctccctg
gtgcaggacgccctggaggtctctcctttgaagcgctgcgacctttctatgtttgacctc
gttggtctggagagccgtgtatcccggtaccaggcagatgtcttcctgccgcgaaacaag
gtcagccgccaactaatccaggagatcgtggagtctcctgaaccgcttccgagacccaga
ccggtccgcatgaaggtcaacaggatgttccagccgcctcctaaaagtgataatcgaccg
gtcctactgatgaacaaaccaacctgctccgtacctccagctgctcagacccccaaacct
caaacagttactgaagtccccttaactcctcaacctgctcctgtcgtccaacaagtggtt
tgtacagtggccaccgtcacccctcctcgcccgtccatgcatcccaccgctcagatcgca
gtgagatccagcggtccaaagcccgttctgaccgtacggcctcccactgcttcctgtgca
gccggcgtcccggctcacccgagcccaaaccccggcagcgttctgccccagagggttctg
ctcagtccagatatgcaagctaggttaccttctggcgaggtagtgagcatcgcccagttg
gcctctctggcagggcgacctgtgtcgtcatgtcagggcagtaaacccgtcaccttccag
cttcagggcaacaagctgactctgtctggagcccagatccaccaagtcccagcagcttct
ccacgcccagttcaaggtaatgtgatgcacctggtgtccagcggggtgcagcaccacctc
atcagccagcctgcccaggtggctgtccagagcaacaccacctctactgctccacctacc
aatcgactgcctcacaacgcctctgcacaagtgacccccaccatggtgagcagccccgga
gtcgtgaagatcgttgtgcgtcagacagcaggcaaggacggcgggcccgtgccgacgctg
gctgtggccccttccccccgtgttgttcctcagacatccccctccccgcacccccacgcc
accacaacccctgtccgaaccaccgctccactgcagatcgcccagcgcacccccggtccc
gccacagcccactacaccatagctcctccagggaaccctagctccaccccgaaccagccc
cacccccctcgccctgtcctcaaagtagtgcagcctcctccacccaacacagagcagcca
gctctggttcaggtggcctcctcgtcctctgcttcgtccaagtctccagcagcagcacgt
gatggcggcagcagcagtcaaacagcagtaacaacaaagtcgaggcccagtacaagcgtt
aaagccttccctccacacaggagagtacctcggcctcctcctcgctctcctttccacatg
aaatggctagcagacagcttcaagcaggagcgcgacagccgactggacttcatcattcga
gccaacgagaaccgctgtgcggcgaagcccatgtacggccgggaggttctggacttcctg
actttcctccccggatcccgtccctcgccggccgccctgcgccctcagagggagtggggc
cgctcgggccacagcagcgctctgtactcacagtggcaaaacaaatacgacttctggttt
cagagtcgcgccgttagagaggccatccacagcgtcgacgacaggctggagctgcttaaa
gaaattgtagacaggtttacatttgcaattcccccagtggcggctcctcagatctccatg
cactgctgccatcctcctccctctctgaacaacaagcaggtggtcttctcctcccagctt
tcgactcaggtcactccgcttactcgcagtctccatcgtatccagtgctacatgaggacc
cagttccccgacctgaggctcatccagtatgattgtggtaagctgcagactctccacact
ttgctgcgaaagctgaagacgngggggcacagagtgctgatcttcactcagatgacgcgg
atgctggacgtgctggagcagttcctcaactaccacggtcacatctacctccgcctggat
ggcagcacccgcgtggagatgagacagtccctcatggagcgcttcaacgcagaccggcgt
attttctgcttcatcttgtcgactcgcagcggaggcgtcggggtgaacctgaccggggcc
gacacggtggtcttctacgacagcgactggaaccccaccatggacgctcaggcacaggac
cgctgccaccgaatcggccagaccagagacgtccacatctacaggctgatcagcgagcga
acagtggaggagaacattttaaagaaagccaatcagaagaggatgctgggagatatggct
attgaaggaggaaacttcaccacagctttcttcaaagagcaaaccatcagggagctgttt
gatatgaacgacggggagaagagggaagtggcggtggagctatcggtgccccaagccgag
gaggaggaggctgtcaacaaacagagcaccaccattctggagcaggctttgtgtcgagcc
gaggatgaggaggacatagtcgccgcctctcaggccaaagcagagcaggtggcagaactg
gcggagttcaacgagaacatccctctggatgatggaggggaacaggaggaggtggaggag
ctctcaaaggccgagcaggaaatcgctgctctggtggagcagctcactcctattgaacgc
tacgccatgaacttcctggaagcctcgttagaagacgtgtgcaaagaggagctgaagcag
gctgaggagcaagtagaggctgccaggaaaggcctggaccaggccaaggaggagggccta
aagctccacgcttcatccgatgagaacgacgatgactttttgtccccgacggcttctgtg
gagcccgctcagccagcccgccggggccgtaaacccaaggacaaggacaggaatgtcacc
tctacaaggaccagtggtcgtctgcgtggggcctcgcccgaacctgagcccgagcccgag
cccgctagagaagtgcctgaaagactccgctgtggtctgagaggacgaggagctgccaaa
gacaccggtactgtgtctaccaccccgtcccgcacagaccatcagaaaacctcctcatcg
accaagcttcaagattcctctaagacttctcctgtcagagatcaccagacttctaaaacc
aggactctgccaaaccgctcccatcccagtccagtgccttcccctcccacaacctctccc
ccaggagggaaacaacagtgtgctggggagactgacggcaagacctccaaagcctgcaga
gaggacaaagggggggagaatgaaaagagggcgtccgagtcatcgctagaaaccggctgc
ccggtggaccagcaggcaaaagatgaagacggtaaagacaacagtgccatgtctccccct
ccaccagctcccgatcgccccgcaagcgtcagtcagcagacggtgaagtcctacggggcc
tggttgaagactccccgtcggccaaagtcctgcggaagcttccggggaggctggtcacgg
tggtggaggagaaggagccaaggaggaggaggcggcgaggaagcggcactggaggtgggg
cttcttcagaggaggcaaccgtggaggagagcgctgccgggaccgtcgacgaaacaaaca
aagacaacacatcgccaagccccgacagcaaaaccaaaggggccgttaccaaatcccctc
aggaccaggtctctactcctagtccggctgtgcatccgccgcctgtcaggagttatcctc
catattctccaccccatctttctccggacatgcccgtgctga
DBGET
integrated database retrieval system
