Anoplopoma fimbria (sablefish): 129092074
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Entry
129092074 CDS
T09102
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129092074 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
129092074 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129092074 (nfkb2)
Transcription factors [BR:
afb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
129092074 (nfkb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
129092074
NCBI-ProteinID:
XP_054455830
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All DBs
Position
6:810660..831302
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AA seq
897 aa
AA seq
DB search
MAGALRMTEPQFINYDNDLQLNFMPYDYIPPVEIKTEPYIPETGTQRAHGPYIQIIEEPK
QRGFRFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYVGHARVEVQLVSHTDPPRVHAH
SLVGRHCTENGTCTLDIGPNDLTASFSNLGILHVTKKGVVEVLSRRLRDERKRQKGAHCH
LTDSEESSILKEAKELGKVMDLNIVRLKFTAYLQDSNGGYTRGLKPVVSNPIYDSKSPNA
SNLKISRMDKTCGTVLGGDEIFLLCDKVQKDDIEIRFYEEDEEGGWEAFGDFSPTDVHKQ
YAIVFKTPPYHSAEIDRPVTVFLQLKRKKAGDSSDPKQFTYIPQVQDKEEVLRKKQKPLP
HYESWRGGGRGGGAGGFGGGGAGGGGFQFSHQMNGAGGGGDFFTEGFTGFGGGGGTQMSG
SNPQTGVSQQQTDRQTGGQTGSPLQQQLFQLANALHSRASQSARQTAAALLQYCSTGDAR
VLLAIQRHLCGVQDGNGDTPLHLAIIHHQTGVIQQLIHTLLSSLQQNILNTANHLQQTPL
HLAVITRQVKVVEVLLRAGADPSLLDKDGRSPLHLAALAGDTTTLRPLLAHLGERHAHLV
NTPDFHGLHPLHLAVRRDGERCLRLLVEGGAKINAPEQKSGNTALHLAVRENLFKVACTL
ITELKADVNATTFGGNTPLHLASSLASPTLCSMLIAAGADKNVENDEPLFFSSSSDEEQD
EDEPIRAQEAGSQPINPRKRRAGGHTPLDLAKCKKVKNLLSWRQSPKPSPSGKGMTPGSS
EEAEGMDEDTLSRLVEVLSVGDVPWRKLAEKLGMMTLTHLYLDSPTPCHHLLQHYQLGGG
PVEGLVEALQSLGLTEGVRLLRNSELRDDKHSTDATVDSGFGSQPIEEEEEPPMANQ
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagctctcaggatgactgaacctcagttcatcaactacgacaacgacctgcaa
ttgaattttatgccgtacgactacattcctccagtggaaataaagactgaaccctacata
cctgagacaggtacgcagagagctcacggtccttacattcaaatcattgaggagcccaaa
cagaggggctttcgtttccgttatgagtgtgagggtccgtcccacggcgggctcccaggg
gcctccagcgagaagaaccggagaacgtacccgaccgtgaagattaataactacgtggga
cacgcccgggtggaggtccagctggtgtcccacacggatcctcctcgggtccacgctcac
agtctggtgggacgtcactgcaccgagaacggaacctgtacgctcgacatcggccccaac
gacctcactgcctcattcagcaacctgggtatcctccatgtgaccaagaaaggtgtggtc
gaggttctgagccggaggctgagagatgagaggaagagacagaaaggagctcactgtcac
ctcacagattcagaggaaagctccatcctgaaggaggccaaggagctggggaaggtgatg
gacctgaacatcgtcaggttaaagttcactgcctacctccaggacagcaacggagggtac
accagaggactgaaacccgtcgtctccaaccccatctatgacagcaagtcaccaaacgcc
tccaacctgaagatctctcggatggataagacgtgcggtacggtgctcggaggagacgag
atcttcctcctgtgtgacaaagtccagaaagatgacatcgagatccgtttttacgaggag
gacgaggagggaggctgggaggcgttcggtgacttctcacctaccgacgttcacaaacag
tacgccatcgtgttcaaaacgccgccctatcacagcgcagagatcgatcggcccgtcacc
gtcttcctgcagctgaagaggaaaaaggccggcgacagcagtgaccccaaacagttcacc
tacataccccaggtccaagacaaagaggaggtgctgaggaagaagcagaagccactgcct
cactatgagtcctggagaggaggaggacgaggtggaggagctgggggatttggaggagga
ggagctggaggaggaggattccagttcagccaccagatgaatggagcaggaggaggagga
gatttcttcactgaaggcttcacagggttcggtggaggtggagggactcagatgtcaggc
tcgaaccctcagacgggtgtttcccagcaacagacagacagacagacgggaggacagact
ggttcgccactacaacagcagctctttcagctcgccaacgccctccacagcagagcctct
cagagcgccagacagacggcggccgccctcctgcagtactgcagcaccggggacgctcgg
gtccttctggcaatccagagacacctctgtggcgtccaggacggcaacggagacactcct
ttgcacctggccatcatccatcatcagacaggtgtgatccagcagctgatccacactctg
ctcagcagcctgcagcaaaacatcctcaacacagccaaccacctccaacagactcccctc
cacctggcggtgatcacccggcaggtgaaggtggtggaggtgctgctgagggcgggggcc
gaccccagcctgctggacaaagacggtcgcagtccgctccacctggcggcgctggccgga
gacaccactacgctccgcccgctgctggctcacctgggagaacgccacgcccacctggtc
aacacacctgacttccacggtctccatcctctccacctggccgtgaggagggacggggag
cgctgcctccgcctcctggtggagggcggagccaaaatcaacgcacctgagcagaagagt
ggaaacaccgccctccacctggctgtgagggaaaacctgttcaaggtggcctgcactctc
atcacggagttgaaggcggacgtcaacgcgaccacgtttgggggaaacactcccctccac
ctggcctccagtctggcctccccgactctctgctccatgctcatcgctgcaggcgctgat
aaaaacgtggagaacgacgagccgctcttcttcagctcgtcttcagacgaagagcaggac
gaagacgaaccaatcagagcgcaggaggccggctctcagccaatcaacccccgcaagaga
cgagcaggaggacacacccctctggacctcgccaagtgcaaaaaggtgaagaacctgtta
agctggcgacagagcccaaagccgagtcccagcggtaaggggatgacaccgggcagcagt
gaagaggcggaggggatggacgaggacacgctgtcccggctggtggaggtgctgagcgtc
ggagacgtcccctggaggaaactggccgagaagctggggatgatgacgctgactcacctt
tacctggacagtcccacaccatgccaccacctgctgcagcactaccagctgggtggaggt
ccagttgaaggtctggttgaagctcttcagtctctcggtctgacagaaggagtccgactg
ctgagaaacagcgagctccgggacgacaaacacagcaccgatgccacggtcgacagcggc
ttcggcagccagccaatagaagaagaggaggagccgcctatggccaatcagtga
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