KEGG   Anoplopoma fimbria (sablefish): 129095546
Entry
129095546         CDS       T09102                                 
Symbol
kdm4c
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:afb03036]
    129095546 (kdm4c)
Enzymes [BR:afb01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     129095546 (kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     129095546 (kdm4c)
Chromosome and associated proteins [BR:afb03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    129095546 (kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H JmjN PHD Tudor_5 Rad9_Rad53_bind
Other DBs
NCBI-GeneID: 129095546
NCBI-ProteinID: XP_054460007
LinkDB
Position
9:complement(20937085..20965043)
AA seq 1661 aa
MAGAEVYTPANPTCKIMTFRPTMEEFKDFNQYLVYMESQGAHRAGLAKVIPPKGWKPRRT
YDDIDDLMIDAPIQQMMAGQSGLFTQYNIQKKPLSVQEFRRLANSDMYCTPRYLNYEDLE
RKYWKNLTFVSPIYGADVSGSLYDEDVEEWNIGHLNSILDVIEEDCGVSIQGVNTPYLYF
GMWKTTFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLATGFFPNSFKGCEAFL
RHKMTLISPSILKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWID
YGKVATQCTCSKDMVKISMEPFVKRFQPDRYANWMVGKDSAPPDHILATPSTTPELQSWL
QRRRKSKPATKGCTHTRMRSKRLRTTEEPIGLDGSSALTSSKRKGMGGPPGPKVRRTVAG
TSCREEEEEEKEKKKEAESKHNQIQNSIQLPGPCRQMCVVKVNRVESNCLGFLNKEPSHN
SRCSSIPSTASAVKKDLKAEMGTRIDPQCLSGSGVTSRTPEGLGQWAEATQMHPGINEPR
CCSPEPQDLLTSQDCSIRVSPLEANKLCSSSHTTSTSAETEMSLRPADSEAQTSSSSCRE
DTLSLTPNTDSSMNTGTQSNTNSTAKAEKMDTFVDTKHINPHSTTEALYDLKTEPVEGDS
YTSCGSSSPSGPNVSLEKNSTEENLFPPLLQRNAVDMPQLTPEPADKVGICPLPPVLIQE
MPSLTPAEDVLTNVPKASSRSHQVAPVLQRETPTGSPSSHEAKQEESETDPMMSKEPLTV
ENANKWHLDSPYNCDGAAVSGLEGNTAHLTTNALHKITSGGVHEMLIMPGIAAEKDPTKL
ENVTTGQTDASSRQLVQSSAPQTEQQYSLAELASKDDSVQRVSAFSPSSCGSLLTCTSNN
NPPTPSSPLCTQSDSPLALQLHHHTTYSTSHCTSENPYMEPKPFSSSIWKNFNSQGPAVL
IQSLHPELPSDFTHDPLPYTMWTEPQCKEVTDLEDAEQDLRESENQEEEGGPLTWAQLEP
TSLVSVGAVEPLGTSPLYGDFDLHRGEAGGSEALSLCRELGRQREAEESLHSVTAVSPLG
MGRGEQDGVSDIEEGGSDGDEAEQQSSVKGESSSDSDDEEGGEEEEEEEEEENDTSNCEC
DESGLEPGEVCAYAALSVKRTAKSWRHPLRKPTARAVPTAVKQQAASDDEPPEASLAEEE
EEQEMEAWAKPLIYLWQNRKSCFTAEREYNAHAASMQPHCAVCTLFMPYYQAEDKVEDTT
PIVARDTSRSSSPMEGPTRPCRGLRSTKPLVPEICFSFREQNCPPTPTNPLLQEDGTSPL
LYCQGCCLQVHASCYGVAADDVGEQWSCDRCTEGSFTAECCLCNLRGGALKKTQGDKWAH
VMCAVALPEARFSDEAKRSPIDTSRIPMQRYKLKCIYCRKRCSGKRQAGACIQCSCGRCP
TSFHVTCAHAAGVIMEPDDWPYVVSITCHRHQSRSSTAKQRACQAPISLGQTVISKHKNL
RYYSSKITEITSQMFYEVMFDDGSFSNDTYPEDIVSRDCMNLGPPEVGEAVQVKWPDGLF
YGAKYLGSNVSYMYQVEFEDGSQVLAKREDVYTLDEDLPKKVKRRLSTASSMRFQDAFFT
TQGERKRQRTPNSRFQKDYVALPGLRTTAKSTWEQRSHKGK
NT seq 4986 nt   +upstreamnt  +downstreamnt
atggcgggggcagaggtgtacacccctgcaaaccccacctgcaagattatgaccttcagg
cccaccatggaggagttcaaagacttcaaccagtacctggtttatatggagtctcagggt
gcacaccgcgcaggcctggctaaggtgattcctcctaaaggctggaagccccgtcgtacc
tatgacgacatagatgatctaatgattgatgcgcccatccagcagatgatggctggccaa
tcagggctcttcactcaatacaacattcagaaaaagcctctcagtgttcaggagttcagg
cgattagcaaacagtgacatgtactgtacacctcgctacttgaattatgaagatcttgag
aggaaatattggaagaacctcacttttgtctcacccatatatggtgcggatgtcagtggt
agcctctatgatgaggatgtggaggagtggaacattggccacctgaactctatcttggat
gttatcgaggaggactgtggtgtatccatccagggggttaacactccatatctatacttt
ggaatgtggaagaccaccttctcctggcacactgaagatatggacctgtacagcatcaac
tacctccactttggagagcccaagtcctggtatgccattccccctgagcatgggaagaga
ctggagcgtctggctacaggtttctttcccaacagcttcaagggctgtgaggcttttctt
cgtcacaagatgactctaatctccccttccatacttaagaagtatggcattccctttgat
aagattactcaggaagctggagagttcatgatcaccttcccttatggctaccatgctggc
ttcaatcatggcttcaactgtgccgagtccaccaactttgccactgtgcgctggatagac
tatggcaaagtagccacgcagtgcacatgtagcaaggacatggtgaagatatccatggaa
ccctttgtgaaacgttttcagcctgaccgctacgccaactggatggtgggcaaagattct
gcacctcccgaccacatacttgctactcccagtacgacaccggagctgcagagctggttg
cagaggcggcgcaagagcaaacctgctaccaaaggctgcacccacactcgtatgcgctcc
aagcgccttagaaccaccgaggagcctatcggcctggatggcagctcagcattaaccagc
agcaagaggaaaggcatgggcggtccacctgggccaaaggtgcgaaggactgtggcaggg
acgagctgcagggaagaggaagaggaggagaaggagaagaaaaaagaagcagagtcgaag
cacaaccagatccagaactccattcagcttcctggtccttgcagacagatgtgtgtggtc
aaggtaaatcgtgtagagagtaattgtttgggatttttgaataaggagccatcccataac
tctcgctgcagctccattccctccactgcttcagcagtgaagaaggaccttaaggcagag
atgggtacacgcattgaccctcaatgcctctcagggtcaggggtcacgagcaggactcct
gaaggactcggacaatgggccgaggctacccagatgcatccgggaattaatgagccaagg
tgttgctctcctgaaccacaagacctcttaacttctcaggactgctctatcagggtctct
cccctggaggccaacaaactctgctcatcttcacacacaacaagcacttctgctgagact
gagatgagcttgcgtcccgctgactctgaagctcagacatctagttcctcatgtagagaa
gacactttaagcctaacaccaaacactgacagtagcatgaacacgggtactcagagtaac
actaacagcactgctaaagcagagaaaatggacacgtttgttgatacaaaacatatcaat
ccacactccactacagaagcactttatgatctcaaaactgagccagtagagggggacagt
tacacatcatgtggctcctcctccccttcaggacccaatgtcagtttggaaaaaaacagc
actgaggaaaatcttttccctcctctgctacagaggaatgcagtggatatgccacaactc
actccggagccagcagataaggttggaatctgccctttgccccctgtgctgatccaggag
atgccctcgctcaccccagctgaagacgtgctaaccaacgtcccaaaagcgagctcacgc
agtcaccaggttgcgcccgtgcttcagcgggagaccccaaccggctctccgtcctcgcat
gaggccaaacaggaagagagcgaaaccgacccaatgatgtcaaaagaacctcttactgtg
gaaaacgccaacaagtggcatttagattctccatataattgcgatggggcagcagtgtct
ggtttagaaggaaacacggctcatttaaccaccaatgcgctgcacaaaataacatctggt
ggtgtccatgaaatgctaataatgccaggaatagctgcagaaaaggaccctacaaagctg
gaaaatgttaccactggacagactgatgcttcgtctcgccagctagttcagagctctgca
cctcaaacggagcagcaatacagcttagcagagttggcgagtaaagatgactcggttcaa
agggtcagtgcattcagtccgagcagttgtggctctcttttaacttgcacctcaaacaat
aatcccccaaccccttcctctccattatgcacccagagtgacagtcccttagcattacaa
ctccaccaccacactacatactccacttcgcattgcacttcggagaacccatacatggag
cccaaacctttctccagcagcatctggaaaaacttcaattcccagggtcctgcagttctt
atccagagtctgcacccagaactcccgtctgacttcacccatgaccccctgccttacacc
atgtggactgaacctcagtgcaaagaagtcacggacctggaggatgcagaacaggacctc
cgtgagtcagagaaccaggaagaggaaggtgggcctctcacctgggcccagctcgagccc
acctccttagtttcagtcggtgctgttgagcccctggggacttcacccctctatggagat
tttgacctccatagaggggaagcaggggggtctgaagccctttccttgtgcagggaactg
gggagacaaagggaggcagaggagagcctacactcagttactgctgtttcacctctcggg
atgggaagaggagaacaggatggagtgtctgatatagaagaagggggatctgatggcgat
gaggcggagcagcaaagtagtgtcaagggagagagcagtagcgactctgacgatgaagag
gggggggaggaggaagaagaagaagaagaagaggaaaatgatacgagtaactgcgagtgt
gatgaatcaggcctggaacctggggaggtttgtgcctatgctgccctgtcagtgaagagg
accgctaagagctggcgtcacccactcaggaaacctactgcgagggctgtgcccactgct
gtcaaacaacaggccgccagtgacgatgagccccctgaagcgagcctggcagaggaggag
gaggagcaggaaatggaggcgtgggcgaaacccctcatctacctgtggcagaacaggaag
agctgcttcacagcggagagggagtacaatgcccatgcagcctccatgcagccacactgt
gctgtgtgcacactcttcatgccctattatcaggctgaagacaaagtagaggacactaca
cctatcgtagctagggacacatccagatcctcctctccaatggagggccccacacggccc
tgcagaggtctgagaagtaccaagcccctggtcccagagatctgcttttctttccgggag
cagaactgccccccaactcccaccaaccctctgctgcaggaagatggaacctcccctctg
ctctactgccagggctgttgcctgcaagtccatgcaagttgctacggtgttgccgcagat
gatgtcggcgaacagtggtcgtgtgatcgctgtacagaaggaagctttacagcagaatgc
tgtctctgtaacctcagaggtggcgctctgaagaaaacccaaggcgacaaatgggcccat
gttatgtgtgcagtagcactgccagaagcaaggttcagcgatgaagccaagaggagtccc
attgacactagtaggatccccatgcagcgatataaactgaagtgcatctattgtcgtaag
cgctgctcggggaagcggcaggcaggtgcttgtatccagtgctcatgcggccggtgtccc
acctcctttcatgtgacctgtgcccatgctgccggggtaatcatggagccggatgattgg
ccgtatgtcgtgtcaatcacctgccatagacatcaatcacggagttcgacagctaagcag
cgagcgtgccaagcgcctatctcactcggccagacggtaatctccaaacacaagaacctg
cgctactacagctcaaagatcaccgagatcacctcccagatgttctacgaggtcatgttt
gatgacggctccttctccaacgatacctaccccgaggatatagtgagcagagattgtatg
aacttgggtcctccagaagtcggggaagcagttcaggtgaagtggcctgatgggctgttc
tatggtgccaaatacctgggatccaacgtatcctacatgtatcaggtggagtttgaagac
gggtctcaggtgctggcaaaaagagaagatgtctatactttagatgaagacctgcctaaa
aaggtgaaacgtagactttccaccgcttcaagcatgcgtttccaggacgccttcttcacc
acgcagggcgagaggaaacggcagagaacacccaactcacgcttccagaaagactatgtg
gccctgccaggcctccgtacaactgccaaaagcacatgggagcaacgtagccacaaaggg
aaatga

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