Anoplopoma fimbria (sablefish): 129096051
Help
Entry
129096051 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: ras and Rab interactor 2-like
KO
K23687
Ras and Rab interactor 2/3
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129096051
Membrane trafficking [BR:
afb04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
129096051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RA
SH2
RelB
Motif
Other DBs
NCBI-GeneID:
129096051
NCBI-ProteinID:
XP_054460674
LinkDB
All DBs
Position
9:complement(18689985..18718650)
Genome browser
AA seq
998 aa
AA seq
DB search
MASSSPPGNPPSGLTNRSGSFFKLIDTFALEIGELKREMVLTSPTVNKEPMDRGGLEREV
SGVYLQSPHCGGXGGERDSGYDSLRRRMSVLDRLNRTHPVWLLLAVSEEEARRILLKQPP
GVFLVRKSAALQRKVLSVRLKEDPPGTPISHFPVRESQYTFSLEESGISFADLFRLVAFY
CISRDVLPFTLQLPEAIASAKTQKELEEVAQLGAGFWDSALCSERRPSPRPRRPRRRTLS
PQRTNRNREVEGSRLRLTGSHCDSAPPTLQSHAPPPSFHLERRHSSGPLCFVNPLFLQTN
RHHHHRRGDHPPSHAVRSDNKLENVEKSSVKQLSSSQGSEQHVDKFKLNSKSRSPPPXPP
PPSLMPRRRPAPPPPGPPAATTRPKSMPEAVAVSKRQQPSLSRRPAPARPSMGAKHSSPS
KTASSPVPVPTNPPPPRPKKPDLEAHRCHIALDDETIAKALSRAKLPPCQPPPAVPADVL
LEKDAGSPSTPKTRGRQRLSDMSMSTSSSDSLEYSQSPGFSLGLAPSPSRHLTHQEPVED
SSEDDEDGVADEDEDYGVGLETDLEMRLRPSFKARRRRVGVSLSGGSFILPRALKGRFLK
VSGMLSSLMTPERRAVKRIAELSRDKSSYFGSLVQDYISFVQENRGCHTSGMDFLQTLRQ
FMTQMKAYLRQSSELDPPIESLIPEDQIDQVLEKAMHKCVLKPLRSVIEMALHDFQVSSG
ALQQLRENLALAKTKRPQELGVDGAVPPDPEAIEKIRHKFLNMRKMYSPEKKVSLLLRVC
KLIYTIMQDNSGRMFGADDFLPMLTYVVAQCDMPQLDTEIQYMMELLDPSLLQGEGGYYL
TSAYGAMALIKNFQEEQAARVLSSEARNTLHQWHRRRTTPRSAPSVDDFQNYLRVALQEV
DTGCTAKTLIIQPYTTTEEVCSLCAYKFKIPDPDTFALFLVTKDTSQQLAPDTHPQRIKA
ELHGRPLAQIFHFVYRRVPDLNLCVPAIMHNGNCLQVE
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagctctccgcccgggaacccccccagtggcctcaccaacaggagcgggagc
ttctttaagctgattgatacatttgcgttggagattggggagctgaagagagagatggtc
ctgacctctccaacagtcaataaagagcccatggatcgaggagggctggagagagaggtg
agcggtgtttacctgcagtccccccactgtggtgggngagggggtgagagggattctgga
tacgactcgttgcggaggaggatgagcgtgttggaccggctgaatcgaacccatccggtg
tggctgctgctggctgtcagtgaagaggaggcccgtcgtattctgctcaaacagcctcct
ggggtgttcctggtcaggaagtcagccgctctgcagagaaaggttctgtctgtgcgcctg
aaggaggatccgccaggaactcccatcagccacttccctgtcagagagagccagtacacc
ttttctctcgaggaatctgggatcagctttgcagatctgtttcgcctggtggccttctac
tgtataagcagggatgtcctgcctttcacactccaactcccagaggccattgcatcggct
aagactcagaaagaactggaggaggtggctcagctgggagcaggcttctgggactctgcc
ctgtgcagtgagcgccgcccttccccccgtcctcgtcgccctcgtcgccgtaccctcagc
ccccagcggactaacaggaacagggaggtcgaggggtcccggctgagactcaccgggtct
cactgcgacagtgcaccacctaccctgcagtcccacgctcctccaccttcctttcatctt
gagagaagacattccagtggtcctctgtgctttgtcaaccctctgtttctccagactaat
cgccaccaccaccaccgccgtggggaccatccaccttcacatgctgtcaggtccgataac
aaactagagaatgtggagaaatcgtccgtgaagcagctcagcagcagccaaggtagcgag
cagcacgtggacaagttcaaactgaacagcaaatcgcggtcacctccccccngccctccc
ccaccaagcttgatgccgcgccggcgccctgctccaccaccacctggacctccagcagct
accaccagacccaagagcatgccagaggccgttgccgtgtctaaaagacagcaaccgtcc
ctcagcaggcgcccggctcccgctcgaccatcgatgggtgccaagcatagcagcccgtcc
aaaacggccagctcaccagtccctgtccccacaaacccaccacctccaaggccaaagaag
cctgatctggaagctcaccgctgccacattgccctggatgatgagaccattgccaaggct
ctgtcccgggccaagcttccaccctgccagcctccacctgctgtccctgctgatgtacta
ctggagaaggacgctgggagtccgtccactcctaagaccaggggacgccagcggctcagt
gacatgagcatgtccacttcctcctctgactcactggaatattcacagtctcctggattc
tccctgggactggcccctagtccatcccgacaccttactcatcaagagccagtggaggac
agcagtgaagatgatgaggacggggtagcagacgaggatgaagactatggtgtcggtctg
gaaacagacctagaaatgcgcctccgtccgtccttcaaagcacggcggcgaagggttgga
gttagtctgagcggtggctccttcatcctccccagggccctgaagggacgcttccttaag
gtgagcggcatgctcagctccctcatgacccccgagagacgggcggtgaaaaggatcgct
gagctgtccagggacaaaagctcatattttggctccctggtccaggactacatcagcttt
gttcaggagaaccgaggctgtcacacctcagggatggattttctgcagactctcaggcag
tttatgacacagatgaaggcttacctgcgccagagctccgaactggacccccctatagag
tcactcatacctgaagaccagatcgaccaggtgctagagaaggccatgcacaagtgtgtc
ctaaagcctctgaggagtgtgatcgagatggctttgcatgacttccaggtgagcagcggt
gctttgcagcagctgagggagaacctggccctggctaagaccaagaggccgcaggagtta
ggggtggacggagctgtgcctccagaccccgaggccatcgagaagatccgccacaagttc
ctaaacatgaggaagatgtactcacccgagaaaaaggtgtcattgctgctgcgtgtgtgt
aaactcatctacaccatcatgcaggataactcagggaggatgttcggcgccgatgacttc
ctgcccatgctgacttatgtggtggctcagtgtgacatgcctcagctggacacagagatc
cagtacatgatggagctgctggatccgtctctgctgcaaggagaggggggctactacctg
accagtgcatacggagccatggccctcatcaagaacttccaggaggagcaggcagcgcgg
gtgctgagctctgaggccaggaacactctgcaccagtggcacagacggcgtaccacccca
cgttcagcgccgtctgtcgacgactttcagaactatctccgtgtagccctgcaggaagtg
gacacaggctgcactgccaaaaccctgatcatccagccgtacacaaccacagaggaggtg
tgctcactgtgcgcctacaagttcaagatcccggaccctgacaccttcgcactgtttctg
gtcaccaaggacaccagccagcagctagccccggacacacaccctcaacggatcaaagcc
gagctccacggccggcccctagcccagatcttccactttgtctacaggagggtacctgac
ctcaacctctgtgtcccggccatcatgcacaacggaaactgccttcaagtggaatag
DBGET
integrated database retrieval system
