Anoplopoma fimbria (sablefish): 129098005
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Entry
129098005 CDS
T09102
Symbol
clec16a
Name
(RefSeq) LOW QUALITY PROTEIN: protein CLEC16A
KO
K19513
protein CLEC16A
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129098005 (clec16a)
03029 Mitochondrial biogenesis [BR:
afb03029
]
129098005 (clec16a)
Membrane trafficking [BR:
afb04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
129098005 (clec16a)
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
129098005 (clec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLEC16A_C
FPL
Flu_NS2
DUF6136
Motif
Other DBs
NCBI-GeneID:
129098005
NCBI-ProteinID:
XP_054462919
LinkDB
All DBs
Position
11:complement(5866758..5911496)
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AA seq
1143 aa
AA seq
DB search
MFGRSRSWVGGPGKPKNIHSLDHLKYMYHVLTKNTTVTDNNRNLLVETIRSITEILIWGD
QNDSSVFDFFLEKNMFAFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSNNH
VNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNEHTNDFALYTEAIKFFNHP
ESMVRIAVRTITLNVYKVSLDNQHMLHYIRDKTAVPYFSNLVWFIGSHVIELDKCVQTDE
EHRNRGKLSDLVAEHLDHLHYLNDILIINCEFLNDVLTDHLLNRLFLPLYVYSLVIPETS
EERKINPQVSLYLLSQVFLIIHYQPLVNSLAEVILNGDLSVFTPQMDIHSAHKNTASAGG
VRRFTKPPESLERSLELSRHRGRKRTQKRPNYKNLGEEEDEERTGGGGGGVEEGWDDEAK
GGEREGGREREKGKGTEGGGGGGGGGGGSSKGSRASGETAEEIEMVVMEKCKVSELTEQN
ITDEEKTAAATRTHTQRSRPFLDMVYSALDCNNDDYHALFVLCLLYAVSHSKGINRDLLE
RLQLPVPDQEKSSYSLVLVERLIRVMSHAAQPDGKVRLATLELSCLLLKQSVLSGNNCLI
KDVHLACLEGAREESLHLLRRFYKGEDIFLDMFEDEYRSMTSKPLNVEYLMMDASVLLPP
TGTPLTGIDFVKRLPCGDVEKTRRAIRVFFMLRSLSLQLQGEPETQLPLTRSEDLIKTDD
VLDLNNSDLIACMVVSKDGGQAQRFLAVDVYQMSLVEPETKRLGWGVVKFAGLLQDMQVS
GVEDDSRALNIVIHKPSSNPHAKPLPILQANFIFADHIRCIIAKQRLAKGRIQARRMKMQ
RIAALLDLPVQPSATEVLGFSQTANASPSAMPFRFYEQSRRAPNDPTASRSMFASVDKVP
GFAVAQCVSQHSPSPLSSPSPPSSGSGSTGRCDSVTASTISAQSPTDDGTFLEHTPPSFS
GGEGEGGSGEVTLVSSPPSAPVTALAPSLTPASQPTISLLTDGNAETLSVESLTLLPPSD
SPHLHPCASHIPPTHSLQRPGASTAEEEGGGEREGHRKGEPRDEEELPEEEGSPTDETVK
EQTPTDEEGEDEAEGEDASPEVNREQLSAAELRERYDSADPEYAENTEDAEMFTETPDSP
ELD
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgttcggccggtcacggagctgggttggaggaccggggaaaccgaaaaacatccattcc
ttggaccatttgaagtacatgtaccatgtcctgaccaaaaacaccacagtgacggacaac
aaccgaaaccttctagtggagaccatccgctccatcacagagatcctcatctggggggac
cagaatgacagctctgtatttgatttcttcctggagaagaacatgtttgccttcttcctg
aacatcctgcggcagaagtcggggcgctacgtgtgcgtccaactcctccagactctcaac
attctgtttgagaacatcagccatgagacttccctttattaccttttgtcaaacaaccac
gtgaactccatcatcgtccacaagtttgacttctcggatgaggagatcatggcctactat
atctccttcctcaagactctgtcactcaaactcaacaaccacaccgtgcacttcttttac
aacgagcacactaatgactttgccctgtacaccgaggccattaagtttttcaaccaccct
gaaagcatggtccgcatcgcagtccggaccatcacactcaacgtctacaaagtttcattg
gacaatcagcacatgctgcactacatccgagataagacggcggtcccgtatttcagcaac
ttggtctggtttattggcagccatgtcatcgaactggacaagtgtgtgcagacagatgaa
gaacataggaacagagggaagttaagtgacctggtagcggagcatcttgaccacctgcac
tacctgaacgacatcctcatcatcaactgtgaattccttaacgacgttctgaccgaccac
ctcctcaaccgcctgttcctgcccctctatgtctactctttggttatccctgagacgtcc
gaagagcgaaagattaaccctcaggtgtccctctacctgctgtctcaagtgtttctgatc
atccactatcagccactggtcaactcgctggccgaagtcattctcaatggagacctgtct
gtcttcaccccacagatggatatacacagcgcacacaagaatacggccagtgcaggaggt
gtgcgtcgcttcaccaagcccccggagtctctggagcgctcccttgagctgtctcgccat
cgcggccgcaagagaactcagaagaggccaaactacaagaacttgggcgaggaggaggat
gaggaaaggactgggggaggaggtggaggagtagaggagggctgggacgacgaggccaaa
ggcggagaaagagagggaggccgagagagggagaagggaaaaggtacagagggaggagga
ggaggaggaggaggaggaggtgggagttctaagggaagcagagcgagtggggagacggcg
gaagagatagagatggtggtgatggagaagtgtaaggtgtcggagctgacggagcagaac
atcactgatgaagagaagaccgctgcagccacccgcacacacacacagaggagcagaccg
ttcttagacatggtgtacagtgctctcgactgcaacaacgatgactatcacgccctgttc
gtcctctgcctgctgtacgctgtctcacacagcaaaggtataaaccgagatcttctggag
cgtctgcagctacctgttcctgaccaggagaagagttcctacagcctggtgctggtcgag
agactgatcagagttatgagtcatgccgcacagccagatggtaaagtgcgtctagctact
ctggagctgagctgccttctattaaagcagtctgtgctttctggaaacaactgtttaatc
aaggatgtacatctggcctgcctggagggtgctagagaagaaagtctgcatttactgcgg
agattctacaagggcgaggatatctttctggacatgtttgaagatgaatacaggagcatg
acgagtaaaccgctgaatgtggagtatctaatgatggatgcctcagtgctgctgccaccc
accggtacccctctgactggtatcgacttcgtcaagagactgccctgtggagacgtggag
aagacacgcagggcgatccgggtgttcttcatgttgaggtccttatcgcttcagcttcag
ggagaacctgagacacagctgcctctgaccagatctgaagacctcatcaagacagatgat
gtcttagacctcaacaacagtgacctaatagcctgcatggtggtcagtaaagatggcggc
caggcccagaggttcctcgctgtagacgtgtaccagatgagtctggtcgagccagaaaca
aagcgcctcggatggggtgtggtcaagtttgccggccttctgcaagacatgcaggtgtct
ggcgtcgaggacgacagcagagcattgaacatcgtcatccataagcccagctccaacccc
cacgccaagcccctgcccatcctgcaggccaacttcatcttcgccgaccacatccgctgc
atcatcgccaagcagaggctggccaagggtcgcatccaggcccgacgcatgaagatgcag
aggattgcggctctgttggacctgcctgtgcagcccagtgcgacggaggtgttgggtttc
agtcagacagccaacgcttcacccagtgccatgccgttccggttctacgagcagtcgaga
cgggcgcccaacgaccccacggccagtagatcaatgtttgcctccgtggataaagtacca
ggttttgcagtggctcaatgtgtgtcgcagcacagtccctcgcccctctcctccccctcg
cctccctccagtgggagtgggagcacaggaagatgtgactctgtaactgcaagcacaata
tcagctcagagccccacagatgatggtacgttcttggagcacaccccaccctccttctca
ggcggagaaggggaaggaggaagtggagaagtaacgctagtctcctctcctccctcggca
ccagtcacggccctcgccccgagcctcactccggcgtcccagcccaccatctccctcctc
accgatggcaacgccgagacgctcagcgtggagtcgctcacgctgctgcccccatcggac
tcaccgcacctgcacccctgcgccagccacattcccccaacgcactccctccagagacca
ggtgcctccaccgcagaggaggagggtggcggagagagagagggacataggaaaggtgag
ccaagagacgaggaggagctgccggaggaagaggggtcgccgacggacgagactgtaaaa
gagcaaactcccactgacgaggagggagaggacgaggcagaaggtgaagacgcatctcca
gaggtgaacagagaacaactctctgctgcagagctgcgagaaagatacgactcagcggat
ccagagtatgcagagaacactgaagatgcagagatgttcactgaaacgccagactcacct
gaactggattaa
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