Anoplopoma fimbria (sablefish): 129098126
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Entry
129098126 CDS
T09102
Symbol
tnrc18
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 18 protein
Organism
afb
Anoplopoma fimbria (sablefish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAHCC1-like_Tudor
BAH
Tudor_3
Tudor_5
Motif
Other DBs
NCBI-GeneID:
129098126
NCBI-ProteinID:
XP_054463076
LinkDB
All DBs
Position
11:complement(23791634..23837054)
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AA seq
3073 aa
AA seq
DB search
MDGRDFGAPRSVHLPAPLLGLSMESHRLGAAAAAGRVAPSAGQLGATHPPTLHSGKFLPS
AINLHQHHSDSFPAGSSPFLSGYSGPSHLTSDPAYRSANPSSLQMAQLWASHAHEGYPPL
PGSLYSSPYLSLGHLEPPSLSQHPLYDSHKEGFYLPASLNQLPLHPPPSAPPAAPSNSTP
PQRTSRDGGRDRPYRGERERERERSREEQRPHSVVDLTQEGRSEEACRARSGDRERERER
DRDTERDRESWPFHPHPLEQKPHPHSSTVRPRSRPSPPPHPFPSGGGGRFHGPETDRGGR
EEEGGSRPHHNHNSNANNSNSHSDRQRRNDSVATSAGTLHVSYALPPALQPSAAGPPHPS
TPRESMREQRVSAPTYVPSVEVYDERVGPIQIASQARDNKNRERERERERERERESDRDR
ERERERNRERESYRFPERSPMEHPRLSQSGDSSNQREEGSIICSNGSIGKRAQDASYSSI
QSRFSPDNRDVPKHSIRLGIEQAGAEPKWNAISPLANYATSHMAALAAQHAHTLSSPHSQ
PKRTQMSHSPHTTHRPSSNSHSPQTHPTQHGHGRAGEEGSQRRYLDPSALYRPGGALAGE
RGGGAGSDPAEVSAMQSLIKYSGNFAAEGPGSAMHAADGRGPFGGLANVGMEAERERDRE
RERERERERERDRGERERERDRERVSVGSGGSALRGPPQLKREQERPDSARSFGREGEGE
VRHPPVGIAVAVARQRDSGSSSKQTSGPSDTQRALLQTAIKDEERGEVRGRHHDDRLLVG
RLEREQEKVLRESKELSEFTQMHPAPLSSGMTPSMMTPSLMTSNLMVTGGAGRWPPDPST
LTSHPWMPRPGAPPVWLSSSPYSLGPSSLHQTLPPGYPPSLQGSIPSHYQFARDPQSGQL
IVIPTEHLSHYGGDVLDRGAPVWSGVYGTGSSLQHAAQLQLLSQQQMLRQQELLMIQQHT
AQVLELQRNAQIVERFKASEHRPEMEDKADKRHADPKPRPSSISSPSPSPILHPRKPPLH
SRSPTPSTSSLTPLPPLPSPVTALKSEEGGQRALSHPPTPLPHLSHPPSPRSASPPPSXP
RRPKLEVGQREGQKPSSATFQGIYSDLPPGYPYRSITAPYGSPFPPYHIPAPTEANTEVV
PPHRSRSPPSAAPLPSAHLHPRLLEADIKAQKVESSKTGSFLKQEPDVDQPPLDLTPEPL
GPPRRSRSPVLASQDREGDGETMKLQSQPLPLLVPNPPRLQVERREEVQEEEQEGGQIKM
EVSSYSCQAAYPLPPPLTEAEPKPEVIKDPVQYPSYVAANSDSQESSQTCPSLEKITSTV
CEQEQPDTPMDLHTPIQKESDRESPVYPPPTSNSPLPLVIGPEDPMAGLFALLAASEMAQ
ARPNTPPALTLIPQIENSSMGADCSTTGALEMVALEGMALLSQMAQREMEHIRLEQDMTL
EGLDCLLKASRQILLEAIEKQSHIDLPRTLDPNKKYSWRQRKEEPLYSKMSVDVLDAVEV
EYRVHLAELQKTYKEKQRDLSKLQRRRDKRERQEEERRSLTRRGRGRPRKRKHLATPPKL
DSRPGKVGRTVQYSEDSEAGDGQRKRFRVSREEEETEAGSGGVKMKKKKKKKKSWNDQEP
STSHGLEVSKVKRSHVCEQEQLASDLDRALSLSQLGSLGASRKLPSNSKLDKSKGKSTES
RMKERGIHPSAKAGKHKLAAKASVSETVRKVKGQKNSALFSPMRSELSSCSNNSDSEEHS
SARGGWPPLSGTRSHDDPTRKRRSAASPTSLLSSQKSQKKKHKHLSLLLEEAGLSSSDDS
FDQETSEDEDDYDIEDGSDSEADGGCEESGLGLLARFAASALPVSSTPLSILHDAKQRSR
QSTLGSSECEWSDSGSDLRLRKFPSLLHGKRSAPELPLLPPATRRIDQTSPSKRDDVLPA
NRKPLPKPRPTPRSPRQFSFDLHSGSGFGGFSEDEGWTRRRSERIFLHDATTSANPMPVS
ASASCSQSSSSSSAPPLTPKPASRPKPSPPSREGKDVVKKKKPKDSPLPVSPSNLCSPIT
DVPAPLSLSPARKSQPKAKTKAREPSRGAVSRLMESMAADEDFEPNQDSSFSEDELVPPR
SNSLSERSSTPAPVQCVLDKDSLVDGLRVLIPMDDQLLYAGHVNTVHSPDIYSVVVEGER
GNRPHIYCLEQLLQEAIIDVKPPSVRYLPEGTRIAAYWSQQYRCLYPGTVVNGSSDIDEN
DDLITVEFDDGDTGRIPLSHIRLLPPDYKIHCAEPSPALLVASCSRRRVRKCSKEGKEAV
PKPEESAPKIKGKPGRKPKPKPETSLNPDGREKADPLSSSTQPTERPQAPAKTSQERTSS
VQKAAQEKPRPASRPPVGTQTKPGRKSSTTSPASSPTLPNPVPRKTSSAKPSGPKPARAL
PPSLYPSTYGKVLTVDLYSEPNLSSYNNQRRERESSNSVSPTTNRPMSRSTMAPSSTAPK
PSSSSTARTIPASTPKTKPSSDHHSGSRPSHSSGLIPGSISRLSTGKPGSSLNPRPSSSS
SLSSSSAPRPKLKMPSDQLSSRPRPSSISRPKPNPGQSDMGSVVRRKSMSAEPLVKLDHE
GVTSPKTKKTKALMLLEGRGVRGDHTPITTAPAKLLKARPKVPERESGLQEKDSTYKAPM
LVKEKAESRGSAGRGQEVDTREEKGKKEERKEVEKREERKIKNESQSSSSSESEEEREKG
KLKKKKKCTSSCSSSSSSCSGSSSCSSSSSSSSSSSSTDDSSCSSDEERIPTPPPGPVTP
PPVQDKPKEETKEEEEEEEEEEEEEEEGRKEGEVKEEEEELSPPSESPSPSTSPTPPAPA
LAKPAKPATGKGSGQRGRPPKPKPIGGEGKVGRPKRREGVHLPTTKELAKRQRLPSVENR
PKISAFLPARQLWKWFGKPTQRRGMKGKAKKLFYKAIVRGREMIRIGDCAVFLSAGRPNL
PFIGRIQSMWESWGSNMVVRVNWFYHPEETNPGKKLTDKKNWDQMCGQSLPAALHSSIQR
KDFMERALYQSSHSDENDVQTVSHKCLVVSVEEYEQMTHTRRYADSEDLYYLAGTYEPTT
GMIFNTDGVPVIC
NT seq
9222 nt
NT seq
+upstream
nt +downstream
nt
atggatggcagagatttcggagctccccgatccgtccacctcccagctccgctgctggga
ctctcgatggagtctcaccggctcggagcagcagcggcggccgggagggtcgctccctcc
gccggccagctgggcgcgactcatccgccaacgctccactcgggaaaattcctgccatcg
gccattaacctgcatcaacaccacagcgacagcttcccggcaggctccagtccattcctg
tcaggttactccggcccctcccacttgacctccgaccccgcgtacagatcggccaatccc
agcagtctgcagatggcccagctctgggcatcgcacgctcatgaagggtaccctcctctg
ccaggcagcctgtactccagcccctacctgtccctgggacacctggaacctccctcgctc
tcccagcaccctctctacgactcacataaagagggcttttacctgccagcctccttgaac
cagctgcctctccaccctcctccatctgctcctccggccgccccgtccaactccacaccg
ccccagaggacgtcccgggacgggggaagggaccgcccttatcggggggagagggagaga
gagcgagagcggtcaagagaggagcagaggccgcacagcgtggtggacctgacgcaggag
gggaggagcgaggaggcctgccgggcgaggagcggcgaccgcgaacgagagagagaaagg
gaccgggacacggagagggacagagagagttggcccttccatcctcaccccctcgagcag
aagccacacccccattcttcaacagtgcggcccagatccaggccatcacctccaccgcac
cccttcccttcaggcgggggcgggaggtttcatggaccagagacagacagagggggtcgg
gaggaggaggggggctcccgaccccaccacaaccataactctaacgcaaacaactcaaac
tctcactcagacagacaacggaggaatgactccgtggccacgtcagccgggaccctccac
gtctcctacgcccttcccccggcgcttcagccctccgccgctggcccgcctcacccctcc
acacccagagagtccatgagagagcagcgagtcagcgcaccgacatatgtgccttctgtg
gaggtttacgacgagcgggtcggtccaatccagatcgcctcgcaggcccgcgacaacaaa
aacagagagagagaacgagagagagaacgagagagagaacgagagagcgacagagacagg
gagcgcgaacgggagagaaaccgggagagggagagctacaggtttcctgagaggagcccg
atggagcatcctcgactctcccagtctggcgattcaagcaatcaaagagaggaaggctcc
atcatttgttccaacggttccattggtaaacgagcccaggacgcgtcctactcctctatt
caatcacggttcagtccggacaacagggacgtccctaaacactcaatccgattgggcata
gagcaggcaggggcggagcctaagtggaacgccatcagcccattagccaactatgccacc
agtcacatggccgccctggctgcccaacatgcacacacactctcctctccccacagccag
cccaaacgcacacaaatgtcccattcccctcacacaacccaccggcccagcagcaactcc
cattccccccaaacgcaccccacccaacacggacacgggcgagcaggtgaggaggggagt
cagagacgctacctggacccatcggcgctctaccgacccgggggggcactggcaggtgag
cgaggcgggggagcagggtcagatcccgcagaggtctcagccatgcagagtctgattaaa
tacagtgggaactttgccgctgaagggccggggtccgccatgcacgccgcggacggccga
ggacccttcgggggtctggccaacgtcgggatggaagccgaaagggagagggatcgagaa
agagagcgggagagggaaagagagagagagagggacaggggggagagagagcgagagaga
gacagggaaagggtatcggttggatcaggtggttcagcgttgagggggcctccacagctg
aagcgagagcaggagcggccggacagcgcccgctcgtttggccgggagggggagggggag
gtgcgccaccctccggttggcattgctgtggccgtggcccggcagagagacagtgggagc
tccagtaaacagaccagtggaccctcggacacacagagagcccttctgcagacggctatt
aaagatgaggagcgaggggaggtccgtggccgtcaccacgatgacagactgctggtcggc
cggctggagcgcgagcaggagaaagtgctcagagagtccaaggagctgtcagagttcact
cagatgcaccctgctccgctgtctagcggcatgacacccagcatgatgacacccagcctc
atgacctccaaccttatggtcacaggaggggcgggacgatggcctcccgacccctcaact
ctgacctctcacccctggatgccccgacctggagcccccccagtctggctctccagctcc
ccatacagtctgggtccttcgtcactccaccagaccctccccccaggctaccccccctct
ctgcaaggctccataccctctcactaccagtttgccagggacccacagtctgggcagcta
atagtcatccccactgaacacctgtcacactacggaggtgatgtacttgatcgtggagcc
ccggtgtggtcgggggtatacggtacaggcagctcgctgcagcatgcggcccagctccag
ctcctctcccagcagcagatgctccggcaacaggagctgctcatgatccagcagcacaca
gcgcaggtcctggagctgcagaggaatgcacagatagtcgagcgttttaaggccagtgag
caccggcccgagatggaagacaaagcagacaagcggcacgccgaccccaaaccccgcccc
tcctcgatatcttccccgtctccctcacccatcctgcacccccgcaaacctccccttcac
tctcgctcgccgaccccgtccacctcctccctcacccctctgccgccgctcccctcaccg
gtgaccgccctcaagtcggaggagggcggacagagagcgttgtcccatccgccgacgccc
ctgcctcacctttctcacccgccttcccctcgctcggcctctccgcccccgtccncgcca
cggcggcctaaactggaggtggggcagagagagggacagaagccgtcctctgcaaccttt
caaggcatctactctgatctccctcctggttacccgtaccggtccatcacggccccatat
ggctcacctttccccccttatcacatcccagctcccacagaggcaaacacagaagtcgtc
ccaccccaccgctcccgttcccctccctctgctgcccctttgccctcagcccacctccat
ccaaggctgctggaagcagacatcaaggcacagaaagtagagtcgtcaaaaacgggatct
tttctcaagcaggaacccgacgtggatcagcctccgcttgacttgacgccagaacctctt
ggtcctcctcgccggagccgcagccctgtgctagccagccaggaccgagagggagacggg
gaaaccatgaagctccagtctcaaccgttacctctgcttgtacccaaccctccgcggctt
caagttgagaggcgggaagaagtccaggaggaagagcaggaaggagggcaaatcaaaatg
gaggtgtcatcttactcctgtcaagcagcatatcccctgcctcctccactcacagaggct
gagcctaaaccagaggtcatcaaagatccagtacaatatccatcgtacgtagctgcaaat
tcagacagccaggaatcgtctcagacgtgtccatcactagaaaaaatcaccagcacagtg
tgtgagcaagaacagccagacactccaatggacttgcacactcccattcaaaaagaaagt
gacagagaaagtcctgtttatcctcctccaacctccaactcgccgctcccgctggtcatc
ggacctgaggatcccatggcagggctgtttgctctgctggcagccagcgaaatggcccag
gcccgtcccaacaccccacccgccctgacactcattccgcagatagagaactcctccatg
ggtgcagactgcagcaccacgggtgctctggagatggtggcgctggaggggatggccctg
ctcagccaaatggcccagcgagagatggagcatattcgcctggagcaagatatgacattg
gagggtctggactgtcttctgaaagcaagcagacagattttgttggaggccatcgagaaa
cagtcccacattgatctgcccagaacactggaccccaacaagaagtacagctggaggcag
cggaaggaagaaccgctgtacagtaagatgtctgtggacgtgttggacgcagtggaagtg
gaataccgcgtccacctggccgagctgcagaagacgtataaggagaagcagagagatctg
agcaagctgcagagacgcagagacaagcgtgagcgacaggaggaggagaggcggagtctg
accagacggggcagaggacgacccaggaagaggaaacacttggctacacctcccaaactg
gacagcaggcctggaaaggtgggtaggacggtgcaatactctgaggactctgaagctggg
gatggacagaggaagaggttccgggtgtccagagaagaagaggagacggaggcaggaagt
ggaggagtgaagatgaaaaagaagaaaaagaagaagaagagctggaatgatcaggagccg
tccaccagtcatggtctggaggtgtcaaaggtgaagcgcagccacgtgtgtgagcaggag
cagctggcgtcagacctcgacagagcgctctcactctcgcagctcggctcacttggcgcg
tctcgcaaactcccctccaactctaagttagacaagtcaaagggcaagtctacggaaagt
cggatgaaggagcgcggcatccatccgtccgccaaagcagggaaacacaagttggccgcc
aaggcctctgtgtcggagaccgtccggaaggtgaaaggtcagaagaactctgctttgttc
tctccaatgagatcagagctcagcagctgctccaacaactcagattcagaggagcacagt
tctgctcgagggggctggccccctctttcagggacgcgttctcacgacgacccgaccagg
aagaggcgatcggcggcgtcgccgacatccctgctgtccagtcagaagtctcagaagaag
aaacacaagcacttatcgctgctgctggaggaagcgggcctcagctcctccgacgactcc
ttcgaccaagaaacgtccgaggatgaagacgactacgacatcgaggatgggtctgattcg
gaggctgatggcggctgtgaggagagcgggttgggtctgctggcccggtttgctgcgagt
gctcttcccgtcagctccacgccattgagcattctccatgatgcaaaacaacgcagcagg
caaagcactctggggtcatcagagtgcgagtggtcagactctggatcagacttacgactg
aggaagttcccctctctgctgcacggcaaacgctccgcccccgagctccccctgttgccc
ccggcaacccgccgcatcgaccagaccagcccctccaagcgagatgacgtgctgccggcc
aatcgcaagcctctgcccaaaccacggccaacgccgcggtcgccacggcaatttagcttc
gacctccactccggctctgggttcggaggcttcagcgaggacgagggctggacccgccga
cgcagcgagaggattttcctccatgatgccaccacctcagccaatccgatgcccgtgtca
gcctccgcttcctgcagtcagagctcctcctccagctcagctccacccctcaccccaaag
ccagcctccagacccaaaccctctccgcccagcagagaggggaaagatgtggtgaaaaaa
aagaagccgaaggactcgcctctacctgtgagcccgtccaatctgtgcagtccaatcaca
gacgtccctgcacctctgagcctcagcccggcacgcaagagccaaccgaaagcgaagaca
aaggccagagagccttccagaggagcggtcagccggctgatggagagcatggcggcggac
gaagacttcgagccaaaccaggacagcagcttcagcgaggatgaactggtcccaccgcgc
agcaacagcttatcggagaggtcctccacgcctgctccagtgcagtgtgtgttggataaa
gactctctggtggacggactcagagttttgatcccgatggacgaccagctactgtacgca
ggacatgtgaacactgtgcactcccctgacatttacagcgtggtggtggagggggagaga
gggaaccgaccgcacatctactgcttggaacaactgctgcaggaggctatcatcgatgtg
aagcccccgtccgtgcgctacctccccgagggaacccgcatcgctgcctactggagccag
cagtaccgctgcctttatcccggcaccgttgtcaatggaagttcagatattgacgagaat
gatgatctcatcacggtggagttcgacgacggagacacaggccgcatccccctctcccac
attagactgctgccgccagactacaagatccactgcgccgagccatcccctgcgctactc
gttgctagctgctccaggaggcgagtccgcaaatgcagcaaagagggcaaagaagcggta
ccaaagccggaggagagcgcacctaagatcaaaggaaaacctggtcgcaaacccaaaccc
aaaccagagacctctttgaacccagatggccgggaaaaagctgatcctctatcttcctcc
acccagcccacagagagaccccaggctccagccaagacttcccaggaaaggacctcctct
gtccagaaggcggctcaggagaagccccgacctgcctcccggcccccagtgggaacccaa
acaaaaccaggccgcaaaagctccaccacgtctcctgcaagtagccccacccttcccaac
ccggtgcccaggaagaccagctcagccaagccttctggtcctaagccagcccgtgctctc
cctccgtccctctacccctccacctacggaaaagtcctgactgtggatctgtacagcgaa
cccaacctcagctcgtacaacaaccagcgcagagaaagagagagcagcaacagtgtcagt
cccaccaccaacaggccaatgtccagatccaccatggcaccatcatctactgcacccaag
ccaagttcttcgtccacagccagaaccattcctgcttccacaccaaaaaccaaaccctcc
tcggaccatcacagcggctccagacccagccacagctctggacttatacctggttccatc
tccaggctgtcaacaggcaaacccggctcttcactgaaccccagaccttcatcatcatct
tcactgtcatcatcatctgcccctagacccaaactgaagatgccgtccgaccagctgtcc
tccagaccgagacccagctccatctccaggcccaagcccaacccggggcagagcgacatg
ggctcagtggtgagacgcaagtccatgtctgcagaacccctcgtgaagctcgaccatgaa
ggtgtcacctcccccaagaccaagaagaccaaggctctgatgcttctagagggtcgaggc
gtcagaggagaccacacccccatcaccacagccccagccaaactgctaaaggctagacca
aaagtcccagaaagagagtcgggcctgcaagagaaagactccacctacaaagcaccgatg
ctggtcaaggagaaggcagagagtcgtggaagtgctggtagaggacaggaggtggacaca
agagaggagaaaggtaaaaaggaggagaggaaggaggtggagaaaagagaggagagaaag
attaaaaatgaatctcagagtagcagcagctcggagtcagaggaagaacgggagaaaggg
aagttaaagaaaaagaagaaatgcacctcaagttgctcgtcttcctcttcatcctgctct
ggttcctcctcatgttcttcttcgtcatcctcttcgtcgtcctcttcttccaccgatgac
tcttcctgcagctcagatgaagagaggatccctacgcctccaccgggccctgtcacccca
cctccagtacaggacaaaccgaaagaagagacgaaagaagaagaagaagaagaagaggag
gaggaggaagaggaagaagaggggaggaaggaaggggaggtaaaagaggaagaagaggag
ctatctcctccctcagaatctccttccccttcaacctctccaactcctcctgctcctgct
ctcgccaaacctgctaaaccagctacggggaaaggctccgggcaaaggggtcgtcctccc
aaaccaaagcccatcggaggagaggggaaggtggggagaccaaagcggagagagggagtc
cacctccccacgaccaaggagctggctaaacgtcagaggcttcccagtgtggagaacagg
cccaaaatttctgctttccttccagccagacagctctggaagtggtttggaaaacccact
cagagacgcggtatgaagggcaaggctaagaagctcttctataaggccattgtgcgtggg
cgagagatgatccgcatcggtgactgcgccgtgttcctgtccgccggccggcccaacttg
cccttcatcggccgcatccagagcatgtgggagtcctggggcagcaacatggtggtcagg
gtcaactggttctaccatccagaggaaacaaaccccggcaagaaactcaccgacaagaag
aactgggatcagatgtgcggtcagtctttaccagcagctctgcactcgtctatccagagg
aaagacttcatggagcgcgccctctaccagtcctctcacagcgacgagaatgacgtgcag
acggtcagccacaagtgcctggtggttagcgtggaggagtatgagcagatgacccacacg
cgccgctacgccgacagcgaggacctctactatctggcgggaacctacgaacccaccacc
ggcatgatcttcaacaccgacggagtcccggtcatctgctga
DBGET
integrated database retrieval system
