Anoplopoma fimbria (sablefish): 129098227
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Entry
129098227 CDS
T09102
Symbol
gtpbp1
Name
(RefSeq) GTP-binding protein 1
KO
K24887
GTP-binding protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129098227 (gtpbp1)
03016 Transfer RNA biogenesis [BR:
afb03016
]
129098227 (gtpbp1)
03012 Translation factors [BR:
afb03012
]
129098227 (gtpbp1)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
129098227 (gtpbp1)
Transfer RNA biogenesis [BR:
afb03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
129098227 (gtpbp1)
Translation factors [BR:
afb03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
129098227 (gtpbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP_EFTU_D3
MMR_HSR1
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
129098227
NCBI-ProteinID:
XP_054463189
LinkDB
All DBs
Position
11:1953233..1963343
Genome browser
AA seq
999 aa
AA seq
DB search
MSPSSGQDTNRIAVTLIQKVGGNTVCLHLSTSPVYLYPHLSTSPVCLHLSTSPVCLHLST
SPVYFTCLSHLSASTCLSTFICLPPPVYFTCLPPPVCLHLSTSTCLPPPVYLHLSTFSLP
PPVFHLSTSPVYLHLSASTCLPPPVYFTCLPLPSSVCLHLSTFTCLPSSICLPPPVYLQS
TFTRLLHLSSSTCLPPPVYLHLSFTCLPPPPPPVFLHLSFTCLPSVFLHLSFTCLLHLSS
STCLPSVFLHLSTSTCLLHLSTSTCLPSVFLHLSTSVFLHLSAPPVCSTACSAACQPSPP
PPPPPPPAAGCSDMASIAVAVQQQQQQQQQRSGLIPSVSPQNDAPLPASIFAPDRGGCGD
DAEDECLEDGELLDGEPPDRGLDFTNKLALVSPNGEQYDSLLRQLRDRMEEGCGETIYVV
GMGSDGSDWGLDEKDMEASAATVRSMCEQVDADLITLRERTEAAGLVRDYLIRRRVGELD
FLEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEMESGRTSSVGNDILG
FDQEGQVVNKPDSHGGSLDWTKICEKSSKVITFIDLAGHEKYLKTTVFGMTGHLPDFCML
MVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKI
PVLVQNKDDVIVTASNFSSERMCPIFQISNVSGENMDLLKMFLNLLSSRTSYRDDQPAEF
QIDDTYSVPGVGTVVSGTTLRGLIRLNDTMLLGPDPLGSFITIAVKSIHRKRMPVKEVRG
GQTASFALKKIKRSSIRKGMVMVSPRLCPQATWEFEAEILVLHHPTTISPRYQAMVHCGS
IRQTATILSMNRDCLRTGDKASVHFRFIKTPEYLHCDQRLVFREGRTKAVGTITKLLQST
NNLPSNSKPPQIKMQSTKKVPPRKEDGTPAAGEEAATIAQSAQPGEGDEDPQIKEGNKEN
KPKSGGGGRRRGGQRHKGKGQNSSSTTSTAAPSSGTGGS
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccctccagtggtcaagacacaaaccggattgccgtcactctcatacagaaggta
ggtggtaacactgtctgcctccacctgtctacttcacctgtctacctctaccctcacctg
tctacttcacctgtctgcctccacctgtctacttcacctgtctgcctccacctgtctact
tcacctgtctacttcacctgtctgtctcatctgtctgcctccacctgtctgtctaccttc
atctgtctgcctccacctgtctacttcacctgtctacctccacctgtctgccttcacctg
tctacctccacctgtctgcctccacctgtctacctccacctgtctaccttcagtcttcct
ccacctgtctttcacctgtctacttcacctgtctaccttcatctgtctgcctccacctgt
ctgcctccacctgtctacttcacctgtctacctctaccttcatctgtctgcctccacctg
tctaccttcacctgtctacctagctccatctgtctacctccacctgtctaccttcagtct
accttcacccgtctacttcacctgtcttcctccacctgtctgcctccacctgtctacctt
cacctgtctttcacctgtctacctccaccacctccacctgtcttcctccacctgtctttc
acctgtctaccttcagtcttcctccacctgtctttcacctgtctacttcacctgtcttcc
tccacctgtctaccttcagtcttcctccacctgtctacctccacctgtctacttcacctg
tctacctccacctgtctaccttcagtcttcctccacctgtctacttcagtcttcctccac
ctgtctgctccacctgtctgctccacagcgtgctctgcagcgtgtcagccgtcacctcct
cctcctcctcctcctcctccagctgcaggttgctcagacatggcatcgatagcagtggcg
gtgcagcagcagcagcagcagcagcagcagcggtccggtctcatcccgagcgtctccccg
cagaacgacgctccgctgcccgccagcatcttcgctccggaccggggaggatgcggagac
gacgccgaggacgagtgcctggaggacggggagctgctggacggggagccgccggacaga
gggctggacttcaccaacaagctggcacttgtcagcccaaacggagagcagtacgactca
ttacttcgccagctgcgtgacagaatggaagagggatgtggagagaccatctatgtggtc
gggatgggctcggatggtagtgactggggtctggatgagaaggacatggaggcctcagca
gccacggtgcgctctatgtgtgagcaggtggacgctgaccttattactctccgagagcgt
actgaggctgccggtttggttcgtgactatctgatccgccggcgtgtgggtgagctggac
ttcctggaggtcagggttgcagtcgtgggtaacgtggatgctggtaagagtactctgctg
ggagtgttaacgcacggagagctggacaatggcaggggctttgcccgccaaaagctcttc
agacacaaacacgagatggagagtggcaggaccagcagtgtgggcaacgatatcctgggg
tttgaccaggagggacaggtggtgaacaaaccagatagtcatggaggaagcctggactgg
accaaaatctgtgagaaatcctccaaggtcatcaccttcatagacctggccggccatgag
aaatacctcaagaccacggtgttcgggatgaccggacacctgcctgacttctgcatgctc
atggtgggcagtaatgcaggtatcgtagggatgaccaaagagcacctgggcctggcctta
gccctgaatgtgcccgtgtttgtggtggtgaccaagatagacatgtgtccagccaacatc
ctgcaagagacgttgaagctgctccagaggttactgaagtcccccggctgtaggaagatc
cccgtcctggtacagaacaaggacgacgtcatagtcacggcttcaaacttcagttcggag
aggatgtgccccatcttccagatctccaatgtgtctggagagaacatggacctgctcaag
atgtttctcaacctgctctcctccaggacgtcctaccgtgacgaccagcctgctgagttt
cagatagacgacacctactccgtaccgggagtgggaacagtggtatcaggaacaactcta
cgtggactcatacgtctgaatgacacaatgctgctgggaccagaccccttaggcagcttc
atcaccattgctgtcaaatcaatccaccgcaagagaatgccggtgaaggaggttcgaggg
ggccagactgcctcgtttgctcttaaaaagatcaaacgttcgtccataagaaaaggcatg
gtgatggtttccccgaggttgtgcccgcaggccacttgggagtttgaggctgagatcctg
gtactgcatcatccaaccacgatatcccccagataccaggccatggtccactgtggcagc
ataaggcagacagccaccatcctgtctatgaacagagactgcttacggacaggagacaag
gcttcagtccacttccgcttcatcaagacccccgagtacctgcactgtgaccagaggctg
gtgttcagggagggacgcaccaaggctgtgggaaccatcaccaagctgttgcaatccacc
aataatttaccatccaattccaaacctccacaaatcaaaatgcagtctacaaagaaagtg
ccgccgaggaaagaggacggaaccccggcagctggtgaagaagcagcaacaatagcacag
tcagcacaaccgggagagggagatgaggatcctcagataaaagagggaaacaaagagaac
aagccaaagtctggaggaggtggaaggagaaggggtggccagaggcacaaagggaaaggg
cagaacagcagcagcaccacctccacagcggctccgtcatcaggaacaggaggatcctaa
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