Anoplopoma fimbria (sablefish): 129098248
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Entry
129098248 CDS
T09102
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
afb
Anoplopoma fimbria (sablefish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SH3_2
SAM_2
Ank_3
PDZ_6
Ank_5
PDZ
SH3_9
FERM_f0
SH3_1
Motif
Other DBs
NCBI-GeneID:
129098248
NCBI-ProteinID:
XP_054463207
LinkDB
All DBs
Position
11:complement(3329846..3375064)
Genome browser
AA seq
2476 aa
AA seq
DB search
MTMPFSPLSSDEEQQRMLGNNRHLYPGAGDEEEEEEEEEEEMEEDERDEDQEEENGELEG
EEEEDEEEMVEEVRRGGLLRGGRGEGHRQSAKPAGRHTGGGQIRSGNPGHTTNPYSANPG
PTHQQPANHVQPQQPQPQQPQPQPQRRLKERSTGTGPSEDTHVAMMVFRIGIPDIKQTKC
LRFNPDATVWKAKQQVLCSLTESLRDVLNYGLFQPATDGHDAMFLEEERLLREYPQSFEK
GVPYLEFRYKTRVYKQTNLDEKQLAKLHTKASLKKFMDYIQTSAVDKMAKFLDKGLDPNY
QDADTGETALSLAVQCEPGGGEAIRVLVEGGAHIDFRAKDGLTPVHKAVRGHRHTALLVL
LSLGASPDYKDRRGLTPLYHTVLTGGDTSCCETLLYHHAKLGIRDENGWDETHQACQHGN
SQHLEHLLFYGADSSSQNASGNTALHICALYNKESCSRILLYRGANKDTKNNNGQTPFQV
AVMSGHFELGEIIKNHRDTDVVPFVESPKYAPQRRESTRTLTIPHPQPFLRANSDSSMNL
PDWMAVPNAPGTNIVSVQGYKHTGTLRSSSSPRGARTRSPSRGRIGDKEDRSRQSRRQGP
APASAAGQTAGQRRRLYSAVPGRVFVATRSHSAQGEREISFSKGDRVKVLSVGEGGYWEG
TVRGRTGWFPSDCVEEVMLRSQDNRSESRGERAKRLFRHYTVGSYDSFDAPSDYIIKEKT
VLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLI
EVNGQNVVKVGHRQVVNMIRQGGNSLMVKVVMVTRNPDMEEGSRKKIPQQSKRLSTPAIA
LRSKSMTSELEEMVERAATPWKKKSEFESSQVTEKKRTVYQMALNKLDEILAAAQQTIST
NEAPGTRGQGPKRDRGRSFYGNEQTYGDQSGMGMMPSGLGLGYDRGQYTSGHGPQHGMRR
QKSFGVLEEERQFLHPPAMKFARSLSVPGPDDIPPPPTTAPPEPPFSSAPPLGWRAKSSQ
QPVSVSQSTATSAHYQPFSQPVHFTHGGRERAGGPNTGPSGGAVDHTTSYAHASAHTAQS
RTASRKVAYSGEPVGGGAGAGGGAKTAGLRRGYSTAVPPSSIATVMPQQQQTTQSQPQRA
ERSAAGSGAGGPKGGARRGKVPLVKQSKVEDLRVGQGTLGGKTAVEKSSIPIPTIIVKAP
STSSSGRSSQGSSVEADAPASGETDEAKTPHGPPPSTPAPQPPAPPSIPAPPPPSLPSMR
AQDNMDFTSQFGAAIVGAARRDRERFHEARRKSASLFMSVEDDVSLGGVSDGMTRTQVSE
QQLSTQAESSSTRLRPSKSIDEGMFSGDTFIHHTRSMPPAFGLPEYSSPALDYQPKSVPT
DLYTTAGRQTTPSGTTTFIHPLTGKALDPTSPLGLALAARERALRDDSRLRRGTEHHFTR
QMSSGVFPSSTVTSQPVSSTAQSSSSSYLVTSSSLAATTASVGRPPSPRILRGVGSVWSE
EGGGGEREREGGGAREGLRVRFSEDKTVHTHHYQSQPYQPTYKERERERSRERERSRERE
REMSRERERDKEREGYMRRAEQAAANAAAADSSAQQGSHPQQPGRPSFLRMESQADAYIL
SLTPPSPPPTSTQQTGSTTGSTSSGLMVLPPPAPSVDADDEFVYADPLPPPLQFANSFDR
GIGGLSGYSQHGMRPNSLTSRQQQVPPPPPPPPPPPPPPPPKEPFGSGFPAHTPLHSPQA
GDSTASSLTSYDSEVANLTQSAPSPSQTSPNPPPPHSPSTLQPTSTTGPPPPPSVSPPPP
PGSYHRPFSMSHPHHLYNSSHTSGRSSPTLPPHTVAPPLGYRGSQAPSSTVATSAPVRGS
FSHATTASCATTTTAAATTTCTSTQLYHERTHTTHTASSTAITGSRRIGEHHRPHPTTKK
GESQETVVDSGIEELDSRSSSDHHLDSILASVRGDRLDRGERGGRMGGGGGTGESERGGD
FLESYMSYLDGQTFEMQNATAAASTYPKTNRFREGGRTSDLHRQTSTAPASFHSHRRRDE
QEDDEEGVDVSSRDGYGVRDMQNLGRPISPYFDRPRTPEMNPLWGDGQMSGDQSAALLEG
KKIYPPASSMKPSIINELNNKLQQRTKDWSSQRPLGRHRHRFSEDSASALSPPSARSQSP
SPISLSQPSLSPSPTPTSQYTNWGRSPSPQPPAASQPPRSHSPLSPTSYSPYPTSPKHRP
VYRTKALEFQFIPSRESRKAESHMFQRRRAPSPLISPSERPKLGPPRPSSLPLLPTTPLY
SAMYDLRGSITPPSPGNPLGDPYFSPSPPLFAPSGAPPPPNSALVVSRSLSPTHFLSGTS
SPPLHPLPPPTCLSYPHLPPPSPTKPFASKPLPYWTKYDVADWLGYLNLGEHRERFLDNE
IDGTHLPSLTKDDYLDLGVTRVGHRMNIERALRTVMDRLSSSPFPISVLSPREGQTERRR
DELRLQTQRQKERERE
NT seq
7431 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccgttcagccccctgtccagcgacgaggagcaacaaaggatgctgggaaac
aatcgacatctctacccaggggccggggacgaggaagaggaggaggaagaggaggaggag
gaaatggaagaagacgagcgtgatgaggaccaggaggaggagaacggcgagctggaaggg
gaagaggaagaggatgaggaggagatggtggaggaggtcaggcgaggtggcctattgcgg
gggggcagaggtgagggacacaggcagtcggctaaaccggccggaagacacaccgggggg
ggacagattcggtcagggaaccctggacacaccacaaacccctactcggccaatcccgga
cccacgcaccaacagccagccaatcacgtacagccgcagcagccacagccgcagcagccg
cagccgcagccgcagaggaggctgaaggagcgcagcaccggcacggggccatctgaggac
acccacgttgccatgatggtgttccgcatcggcatcccagacataaagcaaacgaaatgt
ttgcggtttaaccctgatgcaacggtgtggaaggccaagcagcaggtactgtgctccctg
accgaatctctgcgggacgtcctgaactatggtctgttccagcccgccaccgacggccat
gatgccatgttcctggaggaggagaggctgctcagagagtacccacagtcctttgagaaa
ggggtaccatatttggagtttcgatacaaaaccagggtgtacaaacagaccaatctggac
gagaagcagctggctaaactgcacaccaaggctagcctgaagaaattcatggattatatt
caaaccagcgctgtggacaagatggccaagttcttagacaaaggcctcgatcccaactac
caggatgctgacaccggcgagactgctctgtccttggcggtgcagtgtgagccgggtgga
ggcgaggctatccgggtcctggtggagggaggtgctcacattgacttccgcgccaaagat
ggactcacccccgtacacaaagctgtgcgaggccaccgccatacagccctgctggtcctg
ctctctctgggtgcgtctccggactataaggaccggcgggggctgacgccgctctaccac
actgtgctgacagggggggacacctcctgctgcgaaacactgctttaccaccacgccaaa
ctaggcatcagggacgagaacggctgggatgagacacatcaggcctgtcagcatggtaac
tcgcagcatctggagcacctcctcttctatggggctgattcttcctcccagaatgcctct
ggaaacactgccttgcacatctgtgctttgtacaacaaggaaagctgttcacgaattcta
ctctatcggggagcaaataaagacaccaagaacaacaatgggcagaccccctttcaggtg
gctgtcatgtccggccattttgagctgggagaaattatcaaaaaccaccgggatacagat
gtggttccctttgtggagtctccaaagtacgccccccagaggagggagagcacccggact
ctgacgataccccaccctcaacccttcctccgggccaacagtgacagcagcatgaacttg
ccagactggatggcagtgcccaacgccccggggaccaacattgtctctgtgcagggctac
aagcatacaggaaccctgcggagctccagcagtcccagaggggcgaggacgcgttctccg
tcccgaggaaggatcggagacaaggaagaccggagcaggcagagtcggagacaggggcct
gctcctgccagtgcagctggacaaacggcaggtcagcggagacgcctctacagcgctgtc
ccaggacgagtctttgtagctactcgatcccactctgcccagggagagcgagaaatcagc
ttcagtaagggagacagggtcaaagtgttgagtgttggcgagggcgggtactgggaggga
acggtcagaggtcgcacaggttggttcccctctgactgtgtggaggaagtgatgcttcgg
agtcaagacaaccgatcagagagccgtggagaacgagccaaaaggctgttccgccattac
actgtgggctcctatgacagctttgacgctcccagtgactatataatcaaggagaagaca
gtgcttctgcagaaaaaagacagcgaggggttcggctttgtattgagaggggcaaaagct
cagactcccattgaggagttcacccccaccccagcattcccggccctgcagtacctggag
tcagtggacgagggcggcgtcgcctggagagccggtctcaggatgggggatttcctgata
gaggtcaatggtcagaatgtggtgaaggttggtcaccgacaggtcgtcaacatgatccgg
caaggtggcaacagcctcatggtcaaggttgtcatggtaacccgcaaccccgacatggag
gaaggttcaaggaagaaaatcccccagcagagtaagaggctgagcactccggctatcgca
ctaagatccaaatccatgacttccgaactggaggagatggtggagagagctgctacccct
tggaaaaaaaaatcagaattcgaatcctcacaagttacagagaagaagaggacagtctat
cagatggctttgaataaattagatgaaattcttgcagcagctcagcagacaatcagcacg
aatgaggcgccagggacacggggacaggggccaaaaagagacagaggacgaagtttctat
gggaatgagcaaacctacggggaccagtccgggatggggatgatgccgtctgggttgggt
cttggctatgaccgtggccagtacacctcaggtcacggcccacagcacggtatgcggcgg
cagaaatccttcggggtgcttgaggaggagaggcagttcctgcatcctccagccatgaag
tttgctcgcagtctgtcagtgccgggcccagatgacatccctcctcctcccaccacagct
ccaccagagcctccattctcctctgctccgccactaggttggagagcgaagtcatcccag
cagcctgtctctgtgtcccagtcaacagccacatctgcccactaccagcccttctcccag
ccagtgcatttcacccacgggggcagggaaagggcaggtggtcccaacactggccccagt
gggggagcggtggaccacacaacctcgtatgcacacgcatctgcccataccgctcaaagc
aggactgcttcgcggaaggttgcctattctggggagcctgttggaggcggcgcaggggct
ggtggaggagccaagacagcaggtcttaggagaggctacagcaccgccgtccccccatct
agcattgccactgtaatgccccagcaacaacagactacccagagtcaaccccaacgtgca
gaacgcagtgcagccgggtctggagcaggcggtccaaaaggaggggcccggagaggtaag
gtacccctggtgaaacaatccaaggtagaggacctacgcgtgggccagggtaccctaggg
ggcaaaaccgcagtggagaaaagctccattcccatccccaccattatcgtcaaggcccct
tcaacaagcagcagtggacgcagcagccagggcagcagtgtggaggccgacgctcctgca
tcaggagagacagatgaagccaaaacaccacacggtcctcctccctcgactcctgctcca
cagcccccggccccgccttccatcccagcaccgccgcctccatccttgccttccatgcga
gcccaggacaatatggacttcaccagccagtttggggccgccattgttggtgcagctcgt
cgagacagggagcggtttcatgaagcccgcagaaagagcgcctccttgttcatgtctgtt
gaggatgatgtgagtcttgggggagtgagtgatggaatgacaaggactcaagtgtcagag
caacagcttagcacacaggctgaaagttcatcaacacggctgcgcccctccaagtctatt
gacgagggcatgttctctggggacacttttatccatcacacccgcagtatgcctcctgcc
tttggccttcctgagtactcctcacctgccctggactatcagcctaagtctgtgcctact
gacttgtacacaacagcaggcaggcagacaacgccctccggtacaaccacctttattcac
cctctgacaggaaaggcccttgaccccacatcgccactaggcctcgccctggctgctaga
gagcgtgctctgagggatgacagcaggttaaggaggggaacagaacaccacttcacccgc
cagatgtcgagcggggtgtttccttcatctactgtcacctctcagccagtgtcgtccacc
gcccagtcctccagctcctcgtacctggtcacctcttcttcgctggctgctaccacagcc
agtgttggccgcccaccctcacccagaatcctccgaggagttgggagtgtgtggagtgag
gaaggcggtggaggagagagggagcgtgaaggaggaggggctcgtgaggggcttagagtt
cgcttctctgaggacaaaacggtccacacgcaccactaccagtctcagccgtatcaacca
acctacaaggagagggagcgggagaggtcgagagagcgggagaggtcgagggagcgggag
agggagatgtcgagagaaagagagagggacaaagagagagagggttacatgaggagggca
gagcaagctgctgccaatgcggcagctgctgatagctctgctcagcaggggtcccaccct
cagcagcccgggagaccctcctttctcaggatggaaagtcaagctgatgcctatatcttg
tccctcacccctccctcacctccacctaccagtactcagcagacagggagcactactggg
agcactagtagtggtctgatggtccttcctccccctgccccctcagttgatgcggacgat
gagtttgtctacgcagaccctctcccgcctccattacagtttgccaacagcttcgacagg
gggattggaggattatcagggtactcacaacatgggatgcgcccaaacagcctgacctcc
cgccaacagcaggtcccaccccctcctcctccacctcctcctccacccccaccccctcca
ccaaaagaaccatttggaagtgggtttccggctcatacacccctgcattctcctcaggca
ggggactccaccgcctccagcctcacatcttacgacagtgaggtagctaacctgactcag
tctgctccctccccctcccaaacatcgcccaacccaccgccccctcactcgccctctacc
ctgcagcccacctcgacaacgggacctccgcctcccccgtcagtctcaccaccacctcct
cctggatcctatcacagacccttctccatgtcccatccccaccacctttacaacagctct
catacttctgggcgctcttcccccacgcttcccccacacacagtcgcacctcccctgggc
taccgtggttctcaagcaccctcctccactgttgccacctccgctccagttaggggcagt
ttctcacatgccacgaccgctagctgtgccactacaaccaccgctgctgccaccacaaca
tgcacctccactcagctctaccatgagcgcacacacaccacacatacagcgtcctccacc
gctatcacgggcagtcgcaggataggggagcaccaccgtcctcaccccactaccaagaaa
ggagagtcccaggagacggtggtggactctgggattgaagagctggacagccgtagcagc
agtgaccaccacctggacagcatcctggccagtgtccggggagacaggctggaccgaggg
gagagaggaggacgaatgggaggaggaggtgggacaggggaatcagaaaggggaggagat
tttctggagtcttacatgagctacctggacggacaaacttttgagatgcagaatgctaca
gcagcagcctccacttacccaaaaactaataggttcagagagggaggtcgcaccagtgat
ctacacagacagaccagcaccgctcctgcatcctttcactcccacagacgaagggatgag
caggaagacgacgaggagggggtggacgtaagcagccgcgatgggtacggggtgagggac
atgcagaatttgggacgtcccatttcaccgtactttgatcgccctcgcactcctgagatg
aatcctctctggggcgatgggcagatgtcgggtgaccagtccgcggcacttttagagggg
aaaaagatttaccctcctgcttccagtatgaagcccagcatcataaatgagctgaacaat
aaactgcagcagagaaccaaggactggagcagccagagaccattgggcaggcacaggcac
agattttcagaagactcagcttcggctctgagccccccctcagctcgatcccagtcacca
tctccgatttcattatcgcagccatcgttatccccgtcccctacccctacctcccagtac
accaactggggtagatctccatctcctcaacctccagctgcctctcagcctccacgttcg
cattccccgctttccccaacatcttattccccttaccccacttccccaaaacacagacct
gtctaccgaaccaaagccctagaattccagttcatcccaagtcgcgagtcccgtaaagca
gaatcacacatgttccagcgtaggcgagcacccagcccactcatctccccgtcagagagg
cccaagctgggtccaccacgaccgtcatccctgccgctcctccccaccacacctctctac
agtgcaatgtacgatctccgaggttcaatcacgccgccatcacctgggaaccctcttgga
gatccttacttctcgccctctcctcccctgtttgccccgtctggtgccccacctcctccg
aactcagccttagttgtctctcgatccctctccccaactcacttcctgtctggtacctcc
tctccgcccctgcaccctctccctccacctacatgcctgagttaccctcatctaccgcca
ccttcccctacaaagccttttgcctccaagccgctgccctactggaccaagtatgacgtt
gcagactggctaggatacctgaacctgggtgagcacagagagcgtttcctggacaacgag
attgacggcacccacctgccctccctaaccaaggacgactatctggacctgggtgtgaca
cgtgttggccaccgaatgaacatagaacgggccctgaggaccgtaatggacaggctgtcc
agtagcccatttcccatttcggtcctctcacctcgagaaggacagactgagaggaggagg
gacgagctgaggttgcaaacgcagaggcagaaagagagagagagagaataa
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integrated database retrieval system
