Anoplopoma fimbria (sablefish): 129098268
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Entry
129098268 CDS
T09102
Symbol
ppfia3
Name
(RefSeq) liprin-alpha-3
KO
K26226
liprin-alpha
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129098268 (ppfia3)
Membrane trafficking [BR:
afb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129098268 (ppfia3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
129098268
NCBI-ProteinID:
XP_054463227
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All DBs
Position
11:6641752..6669309
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AA seq
1195 aa
AA seq
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MMCEVMPTISEDGRGGGGGGGGGSTGNLESLMVNMLTERERLLESLRETQDSLGTAHLRL
RDLGHEKESLQRQLSIALPQEFAVLTKELNLCREQLLEREEEIAELKAERNNTRLLLEHL
ECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRERLRVALER
VASLEEELQSSSQEVVSLREQIKRRQQGLDNGKERLPNGPSSILDDADIDRQREGEIERQ
RSELGQLKERLALMCRQVGEIEEQLTSARRELARSEEANQKLQRDVKEALCQREDMEERI
TTLERRYLSAQREATSLHDTKDKLENELASKDSLYRQSEEKNRQLQERLDDAKQKLQQTL
QRAETLPEIEAQLAQRVAALNKAEERHGNFEERLRQMEAQLEEKNQELQRARQRERMNDE
HNKRLSDTVDKLLSESNERLQLHLKERMAALEEKNALSEELSNMKKLQDDLLANKDQLIA
ELERIQLELDQLRARPGGSYSSRSLPGSALELRYSHGSGSLPTGSTTHLDPFGNASAGGV
VRRSHRARWSSAREDATKYPDWETGALLGTGFEPGLDVGCSDDEDDGEPRFGSELLSPSG
QTDVQTLAIMLQKQLEAINKEIKLIQEEKENTELRAEEIESRVSVALDPPSSLGRDGTGR
GFIPSSITSSTLASPSPPSSGHSTPRLPHSPARETDRQTVSHVEKAQIFHADGVEQVHLV
FKSSGMTLTHPGAMLDDPREFRSLSADGSSSNSSQDSLHKLSKKKSIKSSIGRLFGKKEK
GRMGQPGRDGSASLASTPSEDSASGDPMGISKTGTLGSDKDRRSKKKHELLEEACRQGLP
FASWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKL
RLAIQEMVSLTSPSAPASTRSSTSNVWMTHAEMETLNAATKPPLKEFSWDQILAYGDMNH
EWVGNDWLPSLGLPQYRSYFMESLVDARMLDHLTKKELRGQLKMVDSFHRVSLHYGIMCL
KRLNYDRKELERRREDSVHQNKDVMVWSNERVMCWVQTIGLKEYGDNLRESGVHGAQLAL
DDTFDYTDLALLLQIPNPNTQARQLLEQEYNSLISMGTERRPDEDGAKTFTRSPSWRKMF
REKDLRGVTSDSAETLPANFRASAISTPSVTLRKVQSDASSGARGESASVRTYSC
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatctcggaggacgggcgcggaggaggaggaggagga
ggcgggggcagcacgggcaacctggagtccctgatggtgaacatgctgacggagagggag
cggctgctggagagcctgagggagacccaggacagcctggggacggcacacctgagactg
agagacctgggccacgagaaggagtcgctccagaggcagctgtccatcgccctgccgcag
gagtttgcagtgctgaccaaagagctgaacctctgccgggaacagctgctggagagagag
gaggagatagcggagctgaaggcggagaggaacaacacacgactgctgctcgaacatctg
gagtgcctggtgtcccgccacgagcgcagcctgaggatgaccgtggtgaagaggcaggcc
cagtctccggccggcgtctccagcgaggtggaggtcctgaaagcgctcaagtccctgttc
gagcaccacaaagctctggacgagaaggtgagggagagactgcgggtggcgctggagcga
gtggcgtcgctggaggaggagctgcagtcgtcctctcaagaggtcgtgtctttacgggaa
cagatcaagcgacggcagcaaggactggacaacggcaaagagcggctccccaacggacct
tcatccatcttggatgacgccgacatcgacaggcagcgtgagggcgagatcgagcgtcag
aggtccgagctgggtcagctgaaagagagactggccctcatgtgcagacaggtcggggag
atcgaggagcagctgacgtccgccaggagggagctggcccgatcggaggaggccaaccag
aaactacagagggatgtgaaggaggctctctgtcaaagggaagacatggaagagagaatc
accacgttagagcgcaggtacctgagcgcccagagggaggcgacgtctctccacgacaca
aaagacaagttggagaacgagttggccagcaaagattctctttacagacagagtgaggag
aagaaccggcagctccaggaacgtctggatgacgccaagcagaagctgcagcagactctg
cagagggctgagacgctgcccgagatcgaggcccagctcgcccagagagtggcggcactc
aacaaggcggaggagcgtcatggtaactttgaggagcgactgcgacagatggaggcgcaa
ctggaggagaagaaccaggagctacagagggcgaggcagagggagaggatgaacgatgaa
cacaacaagcgcctctccgacacggtggacaagctgctgtctgagtccaacgagaggctg
cagctgcatctgaaggagaggatggcggctctggaggaaaagaatgccctgtctgaggaa
ctatccaacatgaagaaactccaggatgacctcctggcaaacaaggaccagctgatcgcg
gagctggagcggattcagctggagttggatcagctgagagcgaggcccgggggctcctac
tccagtcgctctcttccaggaagcgctctggagctgaggtattcccatgggagcggctcg
ctcccaacgggctcgaccactcacctggatccattcggcaacgcctccgccgggggcgtg
gtcaggcgaagtcaccgggcccgttggagctccgccagagaggacgctaccaagtaccca
gactgggagaccggggctctgctggggaccgggttcgagccgggcttggacgtgggctgc
tccgacgacgaggacgacggggagcctcggtttggctccgagctgctttcccccagtgga
cagacggacgtgcagaccctggccatcatgctgcagaaacagctggaggccatcaacaag
gagatcaaactgatccaggaggagaaggagaacacagagttgcgggccgaggagatcgag
agccgggtcagcgtggctctggaccctccgtcctccctggggagagacggcacaggacgg
ggcttcatcccctcctccatcacatcctccaccctggcctccccctccccccccagctct
ggacactccacccctcgcctgcctcactccccggcccgcgagacggacagacagacagtg
agtcatgtagagaaagcacaaatatttcacgcagacggggtcgaacaagttcacttggtc
tttaagagcagcgggatgaccctcacccatccaggggcgatgctcgacgacccccgggag
tttcgcagtctctctgcagatggcagcagctccaacagcagccaagattctctccacaag
ttgagtaagaagaaaagcatcaagtcctccatcgggcggctttttgggaagaaggagaaa
ggacggatgggccaaccggggcgggacggatctgcttctcttgcgtctacaccctctgaa
gactcggcctctggagacccaatggggataagcaagaccgggactctgggttcagataaa
gaccgccgcagcaagaagaagcacgagctactggaggaagcatgtcgccaaggacttccc
tttgcatcctgggatggacccactgttgtatcctggttggagctgtgggtgggaatgccg
gcctggtacgtcgctgcctgtcgcgccaacgtgaagagcggcgccatcatggccaacctg
tcggacacggagatccagagggagatcggcatcagcaacccacttcaccgcctcaaactg
cgtctggccatccaggagatggtgtccctcaccagcccctccgccccggccagcacccgc
tcttcgaccagtaacgtgtggatgacccacgcagagatggagaccctgaacgcagctacc
aagcctccgctcaaagagttcagctgggatcagatactggcctacggcgacatgaatcac
gagtgggtgggcaacgactggctgcccagtctgggtctgcctcagtaccgcagctacttc
atggagtccctggtggacgcccgcatgttggaccacctgaccaagaaggagctgagagga
cagctcaaaatggtggacagcttccacagggtcagtttgcattacggcatcatgtgcctg
aagcgtctcaactacgaccgcaaggagctggagaggaggagagaggacagcgtccaccag
aacaaagacgtgatggtgtggtccaatgagcgtgtgatgtgctgggtgcagaccatcggc
ctgaaggagtacggcgacaacctacgcgagagcggcgtccacggggctcagctggcttta
gacgacacctttgactacactgacctggcgctgctgctgcagatccccaatccgaacaca
caggccagacagctcctggagcaagagtacaactccctcatctccatgggaaccgagaga
cgacccgatgaggacggagcgaagacgttcacccgctcgccctcctggaggaagatgttt
agggagaaagacctccggggcgtgacctccgactccgccgagaccctgcctgccaacttc
cgtgcctcagccatctccacgccctccgttaccctgagaaaggttcagagtgatgccagc
tctggtgcccggggtgaatctgcctcagtgaggacgtactcctgttga
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