Anoplopoma fimbria (sablefish): 129100673
Help
Entry
129100673 CDS
T09102
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B-A-like
Organism
afb
Anoplopoma fimbria (sablefish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
RRM_5
Pex16
Motif
Other DBs
NCBI-GeneID:
129100673
NCBI-ProteinID:
XP_054466087
LinkDB
All DBs
Position
13:16706323..16715078
Genome browser
AA seq
1739 aa
AA seq
DB search
MNPSDVQPTVDVFHNQVLTNVMESEQQTTERETQPQHWRSCKLIIDPALTKGLYKVYRYD
GQQFNIPVEDLGLFPVETVRDPRVCRLWSKFNKTDLLISKFKLDEWYVGPVPPKEVTFSR
LNDNVRETFLTNMCNKYGNVEDVEIFYNPKNKKHSGIAKVIFDTVQAAKDAVQHLHQTSV
MGNIIQVEIDPKGENRARYLQLILRGLYTPWALPVGSNEQAIRSLIDSLLGGADTQRRGS
ISSPTSIATPLSLDTAYSSIWQDTPCSFGLTPRSQGTPRTPCFSATPLSQDSCYSSLQAT
PVLQGEPSTYSVHKPVRRELCHRKPARYHRGSSEVSDFNFILNHCQPQTQHQLSTQIQTS
RQQLALWGHNAQSSSHNNTEASFNLTSPCQESRDVGGTASQALHQNCNSLSILSIHFPVD
RQTAASSPPNDHACITELSPSAGNCSSSSPQPEVESLDSRIESLLINSQISNPSYFDRKT
YEADVDSQDSPTSPCSASTSPLSDDSPVGASCDFTTGQQRSYNDLVDVSPTSSIENEEDE
TTTAVLFLTRNSESPSDVAHFERKANANNEKEEERFQSFSCPKDHQAANENKEHSSNRPS
RAFTPAKQISSLPQPLSFSLNSTTQLCTSVAPPVIKTGCFHPPVTPFPFPFPIPPFPPSI
PPGPPRLPNGTIPIPPPGWIPPPGHHTGIPIPPPPFPAPSIPPAPTFLGPPPALMVRSVP
PPVHTYTLPMPRSVPLDKGKPPMHGSVPFPFPGPPWPSPPFPRFNPFVPPPDYPLVRENP
HKVTVDKVLEVIIDELKSIIKKDIIRRMIEGIAFKAFEDWWNCQEKKTKTQVSPLKNGAA
SVEDRNKLINPPSHISSQGKKPPLPSFKVKRKRADDTATSEEIENGSCSTHEISDVKQGD
DKVRSASERAKRRHARPHELDSDNDDEGKDEDNTLQDEETTSDKVEAIVPFDDPQNLCDR
DNDDDGDDDGNPPEEEKELAQKHTEDEDAVIFQTSDTVQCLGSDTFSESSFSEESEFSSD
FDSSDSFSSDFDSSDSFSESFEDSSYSDLSPDDEEMEEDNDGSDVCIVISSDEESMELEP
PATPSAPLTPGAQLELGLQDWSDPFHKEETEENQHTSCHLDTCDLDVMMEFHTSKPQNHM
RPPSPIGRPEAELDLDVDMESPDWTKESFGNIENLRPLTPTGCFLDSDPELLIRSKPTSP
AEAERPQTPGKGIVAELESGDSADEVFSLSPTGTELNLVPSDPPASYPSYPPYQDMPKTP
GREDRRGWTQISSGRAPATPGRDTTMSSGSTVMCPTLCSPPPAPCLSSNSYITAPKTPGR
DIILPRRAVVHRRKTQMVTTFQPPLYDFLGSSPISVSSPYSLSESSSDSADERGMCINSG
VKMKPLQGLENMPGLLDEENIRETEKSSLRRKQWRRLKRRWRIHHRRRSLKRINGSLTSH
SHLRRWRSLCEERRILHSVWKDGLDEEDERLLQSTYERLQVRDNGFGWIGDTLWISHPLT
KVLTEESGEHTSWQPKHRTGSARSEGFYKISRKDKMRYLNNTKPASELPSTSTQGKCIPA
QQPISLRAGSDFRSEQRRLLSSFSCDSDLVKFNQLKFRKKRIRFSRSHIHEWGLFAMEPI
SADEMVIEYVGQIIRQVIADMREQRYEEEGIGSSYLFRVDQDTIIDATKCGNLARFINHS
CNPNCYAKIITVESQKKIVIYSRQPISINEEITYDYKFPIEETKIPCLCEADSCRGSLN
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatccgatgtccaacctactgttgacgtgtttcacaaccaggttttgacgaat
gtaatggaaagcgaacaacaaactactgagagagagacacagcctcagcactggagaagt
tgcaagttgattattgaccctgcgttgacaaaaggactgtacaaagtgtaccgctatgat
ggacaacagtttaacatacccgtggaggacttaggcctgtttcctgtggagacagtcaga
gatccccgcgtgtgccgcctgtggagcaaattcaacaagactgaccttttgatttcaaaa
tttaagttggatgaatggtatgttggccctgttccgcccaaagaagtgacattttccagg
ttgaatgacaatgtgagggagacgttcttgactaatatgtgcaataaatatgggaacgtt
gaagacgtggagatattttacaatcctaagaacaagaagcattcagggattgcaaaggtc
atcttcgacacagtgcaggccgcaaaagacgctgttcagcacctccatcagacgtcagtg
atgggaaatattattcaagtcgaaattgatcctaaaggagaaaacagggcacggtatctc
cagctcatcttacggggcctttacactccttgggcgctgccagtgggcagcaatgagcaa
gctattagaagcttaatcgacagtttgctgggcggcgcagacacacagcgacgagggagt
atctccagccccaccagcatcgccacacccctctctcttgacacagcctattccagtatt
tggcaggatacaccttgcagctttgggcttacaccacgttctcagggaaccccccgtact
ccttgcttttctgcaactcctctctcccaggactcttgctactccagtcttcaggcaact
cccgtcctccagggggagccctccacctatagtgttcacaaacctgttagacgtgaactc
tgccatcgtaaacctgcaaggtatcacaggggatccagtgaagtctcagatttcaacttt
attttgaatcattgccaaccacagacccaacaccagctatccacccaaatacaaactagc
aggcagcaacttgctctgtggggtcacaatgcacaatcctcttctcacaataatacagaa
gcttcctttaacctcacctccccctgtcaggagtccagagatgtgggcggcactgcctct
caggctttacatcaaaactgcaattctttaagcatcctgagcattcatttcccagttgac
cggcagacagcagcatcctccccacctaatgaccatgcatgcataacagagttatctcca
tctgctggtaactgttcctctagtagcccccagccagaggtagagagtttggactcacgc
attgaaagtttgctgataaacagccagatttcaaacccttcatactttgatagaaagact
tatgaggctgatgtggactctcaggacagcccaacttcaccttgctccgccagtacctcc
cctttatcagatgactcacctgtcggcgcttcttgtgacttcacaaccggccagcagcgc
tcttacaatgatctggtggatgtcagtccaacatcatccattgaaaatgaagaggatgaa
actactacagctgttttgtttttaacaagaaattcagagtctccgtctgatgtcgcacat
tttgaaaggaaggctaacgcaaacaatgaaaaagaggaagaaaggttccagtcattctca
tgtccaaaggaccatcaagcagcaaatgagaataaggagcactcaagtaacagaccttcc
agagcttttacacctgcaaaacagatctcgtctcttcctcagcctctgtcgttttctctc
aatagcactactcaactctgtacctccgtagctcctcctgtcattaaaactgggtgcttc
catccaccagtcacccctttccctttccctttccccattcctccctttcccccatctatt
ccaccgggcccaccacgcctgccaaatggcaccatcccaatcccacctccaggttggatc
ccacctccaggccatcacaccggtatccccattcctcctccaccttttccagctccttct
attcctcccgcaccaacttttcttggaccccctccagctctgatggtgcgctctgttcca
ccccctgtgcacacctacaccttacccatgcctcgttcagtccctttggataagggcaaa
cctccaatgcatggcagtgtacccttccccttccctggacctccctggccctctccacct
tttccccggtttaatccctttgtgcctccaccagactacccgcttgtgcgggaaaaccct
cataaggtcacagtagataaagtcttagaagtcatcattgatgaattgaagtcaatcatt
aagaaggacattatacgtagaatgattgaagggatcgctttcaaggcatttgaggactgg
tggaactgccaagagaagaaaacaaagacacaagtatctcctttgaaaaatggagcagca
agtgttgaagacaggaacaaactaataaatcccccaagtcacatcagtagccagggcaaa
aaacctccattgccctccttcaaggtaaaaaggaaaagagccgatgatactgctacatca
gaagagatagaaaatgggtcatgttctactcacgaaatctctgatgtgaaacagggggat
gacaaagtgagatctgcatctgagagagccaaacgcagacatgcaagaccacatgagctt
gacagtgataatgatgatgaaggaaaagatgaagataacacacttcaagatgaagaaaca
acatcagacaaagtggaggctattgtgccatttgatgatcctcaaaatctgtgtgacaga
gataatgatgacgatggtgatgatgacggtaatccccctgaggaagaaaaggagttggca
caaaaacacacagaggatgaagatgctgtcatcttccaaactagtgatacagttcagtgc
ttagggagcgacactttttcagagagcagcttctcagaggaaagtgagttctcttcagac
tttgactcgtctgactcgttctcttcagacttcgactcgtctgactcgttctcagagagc
tttgaggactcgtcctactccgacctcagtccggatgatgaagaaatggaggaggacaat
gacgggtctgacgtgtgtattgtcatatcgtcagatgaagagtcgatggaacttgagccc
cccgccaccccctcagccccgctaacccctggtgctcagctggagctgggccttcaggac
tggtcagatccatttcataaggaggaaactgaggagaaccagcacacatcctgtcatcta
gacacctgtgacttggatgtcatgatggagtttcacactagcaaaccccagaaccatatg
cggcccccatcgcctataggacgtccagaagcagagctagacctcgatgtcgatatggag
agccctgactggacgaaagagtcattcgggaacatagaaaacctgagacctcttactcct
actggctgctttctggacagtgacccggaacttctgataagaagtaaacccacatcccca
gctgaggcggaacgaccacaaacaccaggcaaggggatagtggctgaactggaaagtggg
gactctgccgatgaagtcttctccctctctccaacaggcaccgagcttaatctagttccc
tctgatcctccggcctcgtacccatcatacccaccataccaggatatgcccaaaactcct
ggtagagaggatagacggggatggacacagattagctctgggagagctccagcaacacca
ggcagagacacaaccatgtcatcaggtagcacagtgatgtgcccaactctttgtagtcca
cctcctgcgccatgcctgtctagcaattcatatatcacagccccaaagactcctggaaga
gacatcatcctaccccgaagagccgtagtccacaggaggaaaacacaaatggtgacaacc
tttcagcccccgttatatgattttctcggatcctcccccatctcagtgtcctctccgtac
agcctctctgagtcgtcatctgactctgctgatgagaggggcatgtgtatcaattcaggt
gtgaaaatgaagcccttgcagggactggagaacatgcctgggcttctggatgaggagaac
attagagagacagagaaatcctcattaaggagaaaacagtggaggaggctaaagaggagg
tggagaatccatcatcggcggagatcactcaaaagaatcaatggttctctcacctctcac
agtcaccttcgcaggtggcgttcactgtgtgaggagaggaggatacttcatagtgtttgg
aaggacggcctggatgaagaagatgaaaggctgctgcagtctacatatgaaaggctgcaa
gtgcgggataatggctttgggtggatcggtgacaccctgtggatatctcaccctctaaca
aaagtcctcacagaggagagtggggagcatacatcctggcagccaaaacacaggaccggc
tctgctcgcagtgaaggattctacaaaattagcaggaaagataaaatgagatacctcaac
aacacaaagccggcctctgagcttccatctacaagtactcagggaaagtgcatcccagct
cagcaaccgatctcactgcgtgctggatctgacttcaggtctgaacagcgtcgcctgctg
tcctctttcagctgcgatagtgacctggtcaagttcaaccagctgaagttccgaaagaag
aggattcgtttcagccggagtcatattcatgagtggggcctgtttgcaatggagccaata
tcagcagatgagatggtgattgagtatgtgggccaaatcatcagacaggtcatcgctgac
atgagggagcagaggtacgaggaggagggcattggaagtagctatttgttccgggttgat
caggacaccatcattgatgctactaaatgtgggaatttagcaaggtttatcaaccacagc
tgcaaccccaactgttatgcaaagatcatcactgtggagtctcagaagaagatagtgata
tactcccgacagccgataagcatcaatgaagagatcacatatgactacaagtttcccatc
gaggaaacaaagattccttgtttgtgtgaagcagatagctgccggggctccttgaactaa
DBGET
integrated database retrieval system
