Anoplopoma fimbria (sablefish): 129101802
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Entry
129101802 CDS
T09102
Symbol
hnrnpk
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129101802 (hnrnpk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129101802 (hnrnpk)
Spliceosome [BR:
afb03041
]
Common components
Common spliceosomal components
hnRNP proteins
129101802 (hnrnpk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KhpA-B_KH
MOEP19
DJ-1_PfpI
Motif
Other DBs
NCBI-GeneID:
129101802
NCBI-ProteinID:
XP_054467704
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All DBs
Position
13:6065353..6080000
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AA seq
437 aa
AA seq
DB search
METEIEQQDDTSFGNTESNGKRPAEDADEQKSFKRSRNSDEMVELRILLQSKNAGAVIGK
GGKNIKALRTDYNASVSVPDSSGPERILSISADIETVGEILLKIIPTLEEYQQYNGMDFD
CELRLLIHQSLAGSIIGVKGAKIKELRENTKTSIKLFQECCPQSTDRVVLVGGKTERVVE
CIKTMLELIAEAPIKGRAQPYDPNFYDETYEYGGFTVMFEERGGGRRLMGGFPMRGGRSS
GGDRGFDRMPSSRGGRGPMPPSRRDYEEMSPRRGPPPPHPSRVGRGSGGRGRNMPMGHPH
RGGEDRYYDSYRGSEDRSNDRRGRPDRYSDNMSGGGYDNSSSWDSYQSGGRGSYNDMGGP
VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQN
AQYLLQNSVKQYSGHLL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaaattgaacagcaagacgacacttcattcggaaacacagagtcaaacggt
aagcgccctgctgaggatgcagatgagcagaaatcattcaagcgctctaggaactcagac
gagatggttgagcttcgcatcctcctgcagagcaaaaatgcaggagctgtgattgggaag
ggtggcaaaaacatcaaagccctccgtacagactacaatgccagtgtgtcagtcccagac
agcagtgggcctgagcgcatcctgagcatcagtgccgacatcgagacagttggagaaatc
ctgctgaagattatcccaacattggaagagtaccagcagtacaatggtatggactttgac
tgtgagctgcgcctgctgatccaccagagcctggctggctcgatcattggagtgaagggg
gccaagatcaaggagctaagagagaacacaaagaccagcatcaagctgtttcaggagtgt
tgtcctcagtcgacagaccgggttgtgctggtcggcggtaaaacggagagagtggttgag
tgtatcaagactatgctggagcttatcgctgaagctcccataaagggccgtgcacagccc
tacgaccctaacttctatgacgaaacatatgaatatggtggtttcaccgtaatgtttgaa
gagaggggaggaggtcgcaggcttatgggagggttccccatgcgagggggcaggtccagc
ggcggagaccgtggatttgaccgaatgccctctagcagagggggacggggacccatgcct
ccctcccgccgggattatgaagagatgagcccccgccgaggtcctcctccaccccacccg
agtagggttggcagggggagcggcgggcgtggacgcaatatgcccatgggacacccacac
agaggaggagaagatcgttactatgactcgtaccgtggctcagaggacaggtccaatgac
agaagaggcagaccggatcgctatagcgataacatgagtggaggaggatatgacaacagt
tcctcctgggatagctaccagtcaggcggacgtggctcctataatgacatgggtggccct
gtcatcaccacacaagtgacgatccctaaagatctggctggctcaatcattggtaaggga
ggccaacggatcaaacagatccgccacgagtcaggagcctctatcaagatcgatgagcct
ctggaaggttctgaggaccgaataatcaccattaccgggacccaggatcagatccagaac
gcccagtaccttctacagaacagtgtgaagcagtactctggtcatttgctgtag
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