Anoplopoma fimbria (sablefish): 129105231
Help
Entry
129105231 CDS
T09102
Symbol
secisbp2l
Name
(RefSeq) selenocysteine insertion sequence-binding protein 2-like isoform X1
KO
K19539
selenocysteine insertion sequence-binding protein 2
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129105231 (secisbp2l)
03012 Translation factors [BR:
afb03012
]
129105231 (secisbp2l)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
129105231 (secisbp2l)
Translation factors [BR:
afb03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
129105231 (secisbp2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
129105231
NCBI-ProteinID:
XP_054472109
LinkDB
All DBs
Position
2:8890306..8906739
Genome browser
AA seq
1095 aa
AA seq
DB search
MDASDNKDVKLSAEVEPFIPQKKGLEGSIVSMSLPGEAGGGGGGIGGGGGGGGVETTPIP
SYLITCYPFVQENQPNRQHPMYNSGELRWQQPNPSPGGSYLAYPILSSPQPPVSNDYAYY
QIMPAPCPPVMGFYQPFPGPYAGPVPAGVVNPVSADVSERPLTLGPAYGMASQRGRGMVR
PNLLPKQQLGVCQPPRGRRPPTRSVAVQKEVCTLGADGRTKTVMLVDAAQQTDFPGEISG
RCAAERASPLLWKNRTKRRRASHPAENYEQGASEADIDSDSGYCSPKHNQAAGVTQRTAE
NAAAPTGVEAGVMTAGTWVNVASQATPKSWGDRNGQFHRADQRKNPEQRNFSQDFHSGYP
GRVPQNQSEQRLQPAVSTGTEVSPEPLYFEDEDEFPDLATGAAAQRSSKPESSSAQTHAQ
PKLPKNLLDNLPENSPINIVQTPIPITTSVPKRAKSQRKKALAAALATAQEYSEISMEQK
KLQEAFTKAAGKKSKTSVELDLGDMLAALEKHQQAMKARQLNNTKPLSFTVGTTTPFHGS
GLVSLPSMLKGHQQPYSVPHNSLDSNAPRIKRGKEREIPKVKRPTALKKIILKEREGKKG
KTSVEQESSGQEEPGDESLNFTDEIAREPASQEDNGLSMPSDASLSPASQNSPYSITPVS
QGSPASSGIGSPMASNAITKIHSRRFREYCNQVLSKEIDESVTMLLQELVRFQERVYQKD
PTKAKSKRRLVMGLREVTKHMKLNKIKCVIISPNCEKIQAKGGLDEALYNVIAMARDQEI
PFVFALGRKALGRCVNKLVPVSVVGIFNYSGAEGLFNRLVSLTEEARKAYKDMVSALEQE
QAEEALKNDKKVPHHMGHSRNHSAASAISFCSIFSEPISEVNEKEYETNWRSMVETSDAL
EPVEAEPIRPAPSTATQKDSETPAITVNGATPGPTAPQLARPAPPTLTLTQGTGERDEVR
VDDRLELASQQSTETGSLDGSCRGPLNSSITSTTSTLVPGMLEEAEEEEEEEEDYTPEPI
AVEVPTLSSRIESWVSKTLENLQLGKSQESTEEEEEEEDEEEKGQSEEEEDLDSADITET
RAEDIEQVEVKKVTG
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggacgctagtgacaataaggatgtgaagctttcagccgaagtggaaccgttcatcccg
cagaagaaaggtctcgaaggatctatagtcagcatgagtctacccggagaggcaggcgga
ggtggtggaggtataggaggaggaggcggtggtggaggggtggaaaccactcccataccc
agctacctcatcacctgctaccctttcgtccaggagaaccaacccaacaggcaacaccct
atgtataattcaggggagctgcgctggcagcagcctaaccccagccctggtggttcatac
ctggcctatcccatcctgtcttcaccccagcctcctgtctccaatgactacgcttactac
cagattatgcctgctccatgccctcctgtgatgggcttctaccagcccttccctggcccc
tatgcaggtcccgtgccagctggagtggtcaaccccgtctcagcagatgtcagtgaaaga
ccactgactctggggccagcgtatgggatggccagtcagaggggcagaggcatggtgcga
cctaatcttctcccaaagcaacagttgggtgtgtgccaacctccgaggggtcgtcggcct
ccgaccaggagtgtagccgttcagaaggaggtgtgcaccttgggggctgacggtaggacc
aagacggttatgctggtggatgcagcacagcagaccgatttcccaggtgagatatcgggg
agatgcgctgcggagcgggccagtcctctgctgtggaagaacaggacaaagagaagacgg
gcgtcccatccagccgaaaactacgagcagggcgccagtgaggcagacatagacagtgac
agcggctactgtagccccaaacacaaccaggccgcgggggtaacgcaaagaacagcagaa
aatgctgcagcacccacaggagtagaggctggtgtaatgacagcaggtacctgggtaaat
gtagcctctcaggctaccccgaagtcctggggagacagaaacggccagtttcacagagca
gaccagaggaagaatcctgagcagagaaacttctcacaggatttccacagtggctatcca
gggcgtgtgccgcaaaaccagtccgaacaaaggctgcagccagcagtgagcactggtact
gaggtctccccagagcccctctactttgaggatgaagatgaattcccagatctggctact
ggagcggctgctcaacgcagctccaaaccagaatcttcttcagcccagacacacgcgcaa
cctaaacttcccaaaaacctgctggataacctgccagaaaactctcctatcaacattgtg
cagacacccatccccattaccacctctgttcccaagagggccaagagccagaggaagaag
gctctggctgctgctttggccactgcacaagagtactctgaaatcagcatggagcagaag
aaattacaggaagcgttcaccaaagcagcagggaagaagagcaaaacctctgtggagctg
gacctgggagacatgctggcagctttggagaaacaccagcaggctatgaaggccagacaa
ctcaacaatacgaagccactgtcatttacagttggaacaaccactccgttccacggttca
ggcttggtcagcctgccgtccatgttgaagggtcatcagcagccatactcagtcccacac
aattccctggattccaatgcaccccgtatcaagagagggaaggagagggagatccccaaa
gtaaaacggcccacagccctcaagaagatcatcttgaaggaacgtgaggggaagaaaggg
aagacgagtgttgaacaggagtcttcaggccaggaggagcctggggatgaaagtttaaat
ttcactgatgaaattgcacgagagcctgcctcccaagaagacaatggtctgagtatgccc
agcgatgcatccctttccccggccagtcagaactctccgtatagcatcaccccggtgtcc
cagggttctcctgccagctctggcatcgggagtcccatggcctcgaacgccatcaccaag
atccacagccgtcgtttcagagagtactgtaaccaagtgctgagtaaggagatcgacgag
agcgtgaccatgctgttgcaggagctggttcgcttccaggagcgggtctaccagaaggat
cctaccaaggccaaatccaaacgccgcctggtcatgggtctcagagaggtcaccaagcac
atgaagctgaataagattaaatgtgtcatcatatctcccaactgtgagaagatccaagcc
aaaggcggtttggatgaagctttatacaatgtgatcgccatggctcgagatcaggagatc
ccgtttgtgtttgccttgggcagaaaagccctcggacgctgcgtcaacaaactagtgcct
gttagcgtggttggcattttcaactattctggagctgagggtctcttcaaccgtctggtg
tctctgacagaagaggccaggaaggcctacaaggacatggtgtccgctctggagcaggag
caggccgaggaggctctgaagaatgacaagaaagtgccacaccacatggggcactcccgc
aaccactctgctgcttctgccatctccttctgctccatcttctctgagcctatttcagag
gtcaatgagaaggagtacgagaccaactggaggagtatggtggagacttcagatgccctg
gagcctgttgaggccgagccgatccgccctgctccttccacagccacccaaaaagacagt
gagaccccggcaatcaccgtcaacggcgctacgcccggccccactgcccctcagctggcc
aggccagcgcctccgacactgacactgacacagggtaccggggagagagacgaggtccgg
gtggacgaccggctggagctggcctcccagcagagcacagagacgggctccctggacggg
agctgcaggggcccgctgaactcctccatcacctccaccacttccaccctggtcccgggt
atgttggaagaggcagaggaggaggaagaggaggaggaggactacactcctgagcctatt
gctgtggaggtgcctaccctcagcagccgcattgaatcctgggtgtcaaagaccctggaa
aacctgcagctgggaaagagccaggagagtacggaagaagaggaggaggaagaggatgag
gaggagaaaggtcagagtgaagaggaggaggacctcgattcagcggatatcacggagacg
agggccgaggacatagagcaagtggaggttaagaaggtcaccggttga
DBGET
integrated database retrieval system
