Anoplopoma fimbria (sablefish): 129106236 Help Entry 129106236         CDS       T09102                                  Symbol pbrm1 Name (RefSeq) protein polybromo-1 isoform X1   KO K11757   protein polybromo-1 Organism afb  Anoplopoma fimbria (sablefish) Pathway afb03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:afb00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     129106236 (pbrm1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:afb03021]     129106236 (pbrm1)    03036 Chromosome and associated proteins [BR:afb03036]     129106236 (pbrm1) Transcription machinery [BR:afb03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      129106236 (pbrm1) Chromosome and associated proteins [BR:afb03036]  Eukaryotic type   Chromatin remodeling factors    PBAF complex     129106236 (pbrm1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Bromodomain BAH HMG_box HMG_box_2 Motif Other DBs NCBI-GeneID:  129106236 NCBI-ProteinID:  XP_054473572 LinkDB All DBs Position 17:complement(15149890..15162942) Genome browser AA seq 1643 aa AA seqDB search MHWVVMALKRRRATSPSSSVSGGDFDDSQTSSLVSSIGRKRRRTSNIPTVDPIAVCHELY NTIRDYKDDQGRMLCELFIRAPKRRNQPDYYHVVSQPIDMMKIQQKLKMEEYDDVEQLTS DFQLLFNNAKTYYKSDSPEYRAACKLWDLYLRTKNEFVQRGDYDDDDEDGYDAQDNPGGS TEDESAPTCLKEVLEQLLDAVVSYTEPTGRLVSELFQKLPSKMQYPDYYAIIKEPIDLKI VAQKIQLSHYRSVSAMAKDIDLLVKNAKTYNEPGSQVFKDANTIKKVFAQKKSEMEHGEP IKSSIRIRNRRSAQGDRLSAITMALQYESDEEGILSGSVHYDEGESEAESMTSNMDMSNP IFQLFEAVRGARNSQGQLISEPFLQLPSRKDYPDYYHQISQPICLLQIKNKMKNNEYESV EHIDSDLMRMFENAKRYNVPHSSIYKRALKLQHIQQMKRKELLQGDDDDGDSMLSSATSD TSSTKRKSHKKNTKKNRLKALFTAVAEAREAGTGRRLCDLFMVKPSKKDYPDYYKVILEP MDLRTIEHNIRSDKYMTEDAMVEEMKLMFRNARHYNEEGSQVYNDADILEKIMKDRRKDL GPATDDDDIMSPKLKIRKNSITLKKSKYLTPLQQKLNELYEAVKNFTDKRGRRLSTIFLR LPSRAELPDYYIAIKKPVDMEKIKSHMLANKYQDVDALVEDLVLMFNNACTYNEPESLIY RDALMLHRVLLETRRDLEGGDDAHVPDVPRLIQELIRSLFVSVLSHQDDEGRCYSDSLAE IPALDPANPEKPQLNFDIIRTNVDRGSYKRLDVFQDHMFEVLEKARRLNRTDSEIFEDAV ELQQFFIRIRDELCKNGEILMSPALSYTSKHLHSDVEKEKKQKLPKEFEEDKIKREEEKR EAEKREDSVGGSWQSNLQRTYSQDCSFKDSMYHVGDYVYVEPAEPNLQPHIIYIERLWQD NTGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKAPVNKILGKCVVMFVKEYFKL HPEGFRAEDVYVCESRYSAKSKSFKKIKMWAMPLNSVRFLPREVPLPVVRVASMFATKQE EKPPEMVDEIKTIDGIVEKEREDVPMDMTNGEPACQYHEQLCYNNQWLKVGDCVYIGSHG LVRHRVGRIEKMWMRDGAGYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCII GKCVVSSFKDYLSCRPTEVPEENVLLCESRYIESEKQMKKFKGLKRFSLSGKVVEDEIYY FRKLIVPQKEPSPLLDKKIEELEAKFADMTDEELEDLGDDDGELGDQSHPRMQSSMSSDM DTMPYTPPQSTQKSIKGLSKKEGSKRKINMSGYILFSSEMRAVIKAQHPDFSFGELSRLV GTEWRNLESSRKAEYEERAAKVAEQQERDRAQHQTSPRAGTPVGALMGVVPPPIPMGMLN PSMTPVSGEGMMGAYRSAMMPPWGHVEGMVSISGMQPHLMGVPVFPQHLLPVMPGFPGMP YFGVNGMGGGPGAGNVHGSQMGVMGPGQQAPPPYPGQMGQPAHLQPSTPMFVSPPAKSQR LLHSEAYLRYIEGLTAESSTISKWDQALSVQKQDVRLTKEQESRLPSHWLKSKGAHKTMA DALWRLRDLMLRDTLNIRQTHNL NT seq 4932 nt NT seq  +upstreamnt  +downstreamnt atgcattgggtcgtcatggccttgaaaaggagaagggcgacatccccctctagcagtgtg agtggaggagattttgacgatagccagacttcatcgttagtgtcttcaattgggagaaag aggagaaggacctcaaacattccaactgtggatcctattgctgtgtgtcatgaactgtat aatacaatcagagattacaaggatgatcagggcaggatgttgtgtgagctgttcatcaga gcccccaaacgaagaaatcaaccggattattatcacgtggtgtctcagcctattgacatg atgaagatccagcagaaattaaagatggaggagtatgatgatgttgaacaactcactagt gactttcaacttttattcaacaatgcaaaaacatattacaagtctgacagtcctgagtac agagcagcctgtaaactttgggatctttacctgcgaaccaagaatgaatttgttcagcga ggcgattatgatgatgatgatgaagacgggtacgatgcacaagacaaccctggagggtcc actgaggatgagagtgcacctacctgcttgaaagaagtccttgagcagctgcttgatgct gtggtttcttacactgagcccactggccgtctggttagcgagctgtttcaaaagcttcca tccaaaatgcaatacccagattattatgccatcattaaggaaccaatagatctgaaaatc gttgctcaaaagattcagttgagccactacaggagtgttagtgccatggctaaagatata gatttgctggtcaagaatgccaaaacttacaatgagcctggatctcaagtgtttaaggat gcaaacaccatcaaaaaggtttttgcccaaaagaagtctgagatggaacatggagaacca atcaagtccagcattcgtatcaggaatagaaggtctgcccagggagaccgcctctctgct atcaccatggctcttcagtatgaaagtgatgaggagggcatactctcgggttctgtccac tatgatgagggtgaatctgaagcagagagtatgacctctaacatggacatgagtaatcct atcttccagctgtttgaggctgtgcgaggtgccaggaacagccagggccagttgatctct gagcctttcctgcagctgccctccaggaaggactaccccgactactaccaccagatcagt caacccatctgcctccttcagatcaagaacaagatgaagaacaatgaatatgagagtgtg gagcatattgactccgatctgatgcggatgtttgagaatgccaaacgctacaatgttcct cactcctccatctacaaacgtgcactcaaacttcaacacattcagcagatgaagagaaag gagctgttacagggagatgatgacgacggagacagcatgctctcctctgccacgtctgac accagcagcacaaaaagaaaaagtcacaagaagaatacaaagaaaaaccgactgaaagct ctctttactgctgtggctgaggcgcgagaagctggtactggtaggagactgtgtgacctc ttcatggtcaagccctcgaagaaggactatcctgactactacaaggtcatcctggaaccc atggacctccggaccatcgagcacaacatccgctcagacaagtacatgactgaagacgca atggtggaggaaatgaagctgatgttccgcaatgctcgacactacaacgaagaaggctcc caggtttacaacgatgctgacattctagagaagattatgaaagacagacgcaaggatctt gggccagcaacagatgatgatgacataatgtccccaaagttgaaaataagaaagaacagc attacattaaagaagtccaagtacttaacacccttacagcagaagctgaatgagctttat gaggctgtcaagaacttcacagataaacggggccgtcgcctcagcacaatcttcctgcgg ctgccgtctcgtgcagagcttcctgactactacattgccatcaagaaacctgtggacatg gagaagatcaagagccacatgttggctaacaagtaccaggatgttgatgcactggtggag gacttggtgctcatgttcaacaatgcctgtacctacaacgagcctgagtctctcatatac cgcgacgccctcatgctgcacagggtgctgctagagacgaggcgtgacctggagggagga gatgatgctcatgtacctgatgtgccccgcctcatccaggagcttatccgcagcctcttt gtctccgtgctcagccaccaagatgacgagggacgctgctacagtgattcactcgctgag attcccgccctagatcctgcaaatcccgagaagccacagctcaactttgacatcatcagg accaatgtagatcgagggagttataagaggctggatgtgtttcaggaccacatgtttgaa gtgctggaaaaggccagacgactcaataggaccgattctgagatctttgaagatgctgtg gaactgcagcagttcttcatccgaatcagagatgagctgtgtaagaacggagagatcttg atgtctcctgctctcagctacacctccaaacatctgcacagtgatgtggaaaaggagaag aaacagaaactccctaaggagtttgaggaggacaaaatcaagagggaggaggaaaaaagg gaagctgagaagagagaggactctgttggaggatcatggcagtctaacctgcaacgcaca tacagtcaggactgcagcttcaaagacagcatgtaccacgtgggagactatgtatatgtg gagcctgcagagccaaatctacagcctcacatcatctacattgaacgcctttggcaagac aatactggtgagaagtggctgtacggctgctggttctacaggccaaatgaaacatttcat ctcgccacaaggaagttcttggaaaaggaagtttttaaaagcgactattacaacaaagct cctgtcaacaagattctgggcaaatgtgtggtcatgtttgtaaaggagtacttcaaactt cacccagaaggcttcagagctgaggatgtctacgtctgtgaatcgcgctactctgccaag tccaagtctttcaagaagatcaagatgtgggccatgcccttgaactctgttcggtttctt cccagagaggtccccctacctgtcgtccgtgtagcatccatgtttgccaccaaacaagag gagaaaccgccagagatggtggatgaaatcaaaacgatagatggtattgtagaaaaggag agggaggatgttccaatggatatgaccaatggggagccagcatgtcagtaccacgagcag ctctgctacaacaaccagtggctgaaagtgggagactgtgtttacataggttcacatgga ctagtgcgccaccgagtgggaagaattgagaaaatgtggatgagagatggagcaggctac ttcttcggtccaatcttcatacatccagaggaaacagagcatgagcccactaagatgttc tacaagaaggaagtgttccttagcaaccttgaggagacttgccctatgacctgcatcata gggaagtgtgtggtgtcgtccttcaaagactacctgtcgtgtcggccaactgaagtgcct gaagagaatgttctactctgtgagagccgctatatcgagagtgagaagcagatgaagaag tttaagggtcttaagcgcttttcactctctgggaaagtggtggaggacgaaatctactat tttaggaagctcatagtgccccagaaggagccatcccctctgctggacaagaaaattgag gaactggaggccaagtttgctgatatgacagatgaggagctagaggatcttggggatgat gatggcgagctaggggaccagtctcaccctcggatgcaatcttccatgtctagtgacatg gataccatgccttacactcccccgcagtccacacaaaaatccattaagggcctttcaaag aaggaaggctcaaagcgaaagatcaacatgagtggctacatcctgtttagcagtgagatg cgagcggtcatcaaagcccagcacccagacttctccttcggggagctgagtcgcctcgtt ggcactgagtggagaaacctggagagttccaggaaagcagaatatgaagagcgagcagct aaagtggcagagcagcaggagcgagacagggcccagcatcagacgtccccaagagcaggt accccagtaggggcactgatgggggtggtgccacccccaatccccatggggatgctaaat cccagcatgacgcctgtgtcaggggaaggtatgatgggtgcatataggtcagctatgatg cccccgtggggccacgttgaaggcatggttagtatttctggcatgcaaccacatctcatg ggggtgcctgtctttcctcaacatctcctgcctgttatgcctgggttccctggaatgccg tactttggtgttaatggcatgggaggtggtcctggagcgggaaacgttcatggatcccag atgggtgtaatgggcccaggacagcaggctccaccaccatacccaggccagatgggacaa cctgcacacctgcaaccctccaccccgatgtttgtgtccccaccagccaagtcccagcgg ctgctccactctgaggcatacctcagatacattgagggcttaactgcagagtcctctacc attagcaagtgggatcaagctctctcagttcaaaaacaagatgtgcgcctcacaaaagag caagagagcagactgccatcgcactggctgaagagtaagggcgcccacaagacaatggca gatgcactttggcgactccgtgacctgatgctgagagacacccttaacattcgtcagacg cacaacctgtag

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