Anoplopoma fimbria (sablefish): 129108776
Help
Entry
129108776 CDS
T09102
Symbol
si:ch211-1e14.1
Name
(RefSeq) UPF0606 protein KIAA1549
Organism
afb
Anoplopoma fimbria (sablefish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KIAA1549
Shisa
Motif
Other DBs
NCBI-GeneID:
129108776
NCBI-ProteinID:
XP_054476665
LinkDB
All DBs
Position
19:8980309..9014880
Genome browser
AA seq
1926 aa
AA seq
DB search
MAGLVSSVGLVVMLKALMLAHGQHAVFLGMTVLVTVIAADSPVADESLLASTNQPMGLPG
HGQSSTGFKPSASPASYYAAFESPDSPGALPSISEPNHEVRTADITHYQSGRVAFENSKS
STASEALAEEPQPLASLSLSPSEPIMGSRPQSEAAKFFTDWKLARAKPATQSFSLSPTPT
GFQLQPQSNTSKASLSPFAFTRSTSPQLDPNSEQKTINKQQGDASEQTKEIMTSFPAQPL
EPHKLSYADFAADESFSKIMDVNQLSPSSAPLKNNKPTRDINMIPNPDDILAPGYNVPFI
DPHPTSPSSEPTEVPPEDFYPTNTMDVDWGSGDYLETMSFLNAEGEDYSLVTKVPSDSYD
MEDYTESYDTSFPPRVGISPSSMHHLDVSRSPGLTTAYRTIVPLKTIDPSSLSSTIHYML
DPTPTANIDIPDASDIDWPDAFTIQPTDVLLPDMNSMEYYVTQLTKENNRSDTGAEHRGN
VTVVSIGATDITPTGSVRNDTKLTEDGSSGDLSGFEPKDEPTPVGTTEESPQLVSASEPF
LDPSIVPTHFFDPSSIVWDGRVSTTDWSGHTVTIGLDSTVLTEAMLPSATPLLPDDVLFA
SSLTDVHWFITESFPSTTIHTTPFLTPTIAFSPVPTEPAANTTVGMTELTPQDSTFTTEQ
TLNVTLVSTEPASNITLGPPAVLGDQGVTEDRVDITATVTLIPTSSEANTDSAVPKTKAA
TTTSHQATTGTTAATEASTSVNIKSTTSGRTTTTAPTSRPYLCNLDRPAYLVKIGFPSGA
TVGYAKSQVRDILKGEYNKSMELQVVDPPPKFVFRVVSGPVVYTAISVINALRRSGRRFL
SLSPNWITPDRKYQVHTVLQFVPGHIDVRFCNFSESMEKGLTMAFAEVRRRSKESTNFTV
QIVNITMAAPKYQEQRLVRQPVDLTFTVHGSRGYLVGSEVSNALMKLTMVEFSYYMGFPV
LQIAEPFHYPELNTSQLLRSSWVRTVLLGVLDQKVGERTFQANMERRVAMLLGEATGLIR
RVRRATLIGNSSVQVVSASRLEGADHPLEVVYFVEDPSGQRMPAAQTANLLNSLDVQRAA
IVLGYRVQGILAQPVEKVASAPSDAENTNTWIVIGVVIPLIVVIIIISILYWKLCRTDKL
EFQPDAMTSIQQRQKPTTSFRESRTSLQQTLPPTKKNIDFSEEEEGEYEEEEEEYEEEEE
EEEEVKRGKTPVALPKSKGTMSSEEEEEEEEEEEEEEEEELEEEEEEEEEDKDEEKEKFQ
KKGVEQEEQKRQESKAMIMKTGVTKKEDKMKVSTKGRRAKDELQAPSVKGFDFAKLHLGQ
HSKDDVMVIQESVPSGPGPGPLPLSLKDGLSPSENGEIPTPMSKTSTKASRSGRRRERIS
PSDGDSVVSDRSSERESTEENSRAHATPNDSKQTRKVPINVLNGKNRIGPPPMNGTNEQL
SSASIFEHVDRMSRATDASRRLPNKIQLIAMQPMPVPPLYSPPINGKLSDTNQINKEIQV
ALRHKSEIEHHRNKIRLRAKRKGHYDFPTMDDMTNGPGDAKDPDRIYQKAQLQIDKILDP
DAQMPPIYMESKKSGRGRRSPKQRMKGQLNGGLMEADKDHLITEDTDAVYRKCPGVNNVA
YVSDPDQGPGSPHGSPSPTDDVFMGPASSPPGHAPPPPPYMPPQPSIEEARQQMHSLLDD
AFALVSPTSQGSTAGITLPGVNTNPPVSSPPGRGSRPWGPSYQGLGPFPGRFTDLNLSPP
PVQGLTPRQGLGSSYLPPGETAGQSEQFQPDSLYSSRGLYADELPSSARPRPVGGTTGAQ
LHHLTQVGLSSRMNGYPAGVRAAPGQNGGIGWNHYHGDHFSRTEPEKDAFLDCPDYTSSS
VFQTPRSGIREPSAPPVHLDTTGYLSAPPPLDTSPPTHSSASLIKAIREELLRLSQKQAA
VPSYHS
NT seq
5781 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtttagtctcctctgtgggtttagtggtgatgctcaaggctcttatgcttgcc
catggccagcatgcagtgtttctggggatgacggtgttggtaacagtgatcgcggctgac
tcacctgttgcagatgagtcgctgctggcctccacaaaccagcccatgggattacctgga
cacggtcaaagttcaactgggttcaaaccatcagcctcaccagcctcgtattatgctgcc
tttgagagcccagactcacctggtgccctgccatccatttctgaaccaaaccatgaagtt
aggactgccgacatcacacattatcagtcgggacgtgtcgcttttgaaaactccaaatcc
tccacagcaagtgaagccctcgcagaagaaccacaacctctggccagtctatcattaagc
ccctctgaacctataatggggtctagaccacaatctgaggcagctaagttcttcacggac
tggaagctggccagggcaaagccggctacgcaatctttctctctctccccaactcctaca
ggtttccagctgcagcctcagtcaaatacatccaaggcatcattaagcccctttgctttt
acaaggtcaacgtcacctcagctagatcctaactctgagcagaaaacaatcaacaagcag
cagggtgatgcatcagagcaaacaaaggaaatcatgacctcatttcctgctcagcctctt
gagccccataaactgtcttacgctgactttgcggcagatgaatcttttagtaaaatcatg
gatgtgaaccagctgagccccagcagcgcccctttgaagaacaacaaaccaacacgtgac
ataaacatgataccgaacccagatgatattctggcccctggctacaatgtgcctttcatc
gacccccaccctacatcaccttcatctgaacccactgaggtccctccagaggacttctac
cccaccaacaccatggacgtggactgggggtctggagactacttggagacgatgtcattc
ttaaatgcagaaggagaggactactctctggtcacaaaggtgccatctgactcgtatgat
atggaggactatacagaaagctatgacacatccttcccacccagagtaggcatttcccct
tcgtctatgcatcatcttgatgtctcacgttctcccggcctcaccacagcctacagaacc
attgttccacttaaaaccattgatccttcctctttgtcttctacaattcattatatgctc
gaccctactcccacagctaacatcgatatacccgacgcatcagacatagattggcccgat
gctttcacgattcaaccgacagatgttctcttacctgacatgaacagcatggagtattac
gtcactcagttgaccaaggagaacaaccgttcagacaccggagctgaacacagagggaac
gttaccgtggtatccattggtgctacagacatcacacccacaggcagcgtcaggaatgat
accaaattgactgaggatgggtcctctggtgatctgtcagggtttgagcctaaagatgaa
ccaaccccagtaggaaccacagaggaaagtcctcagctggtcagtgcctctgagcctttt
ctggatccgtccatagtcccaacccacttctttgatccatcttctattgtctgggatggt
cgagtgtccaccacagattggtctgggcatactgtaactattggcctggacagcactgtg
ttaacagaagctatgctacccagtgcaacacctttgctgccagatgatgtcctatttgcc
tcctctctgacagatgtccattggtttattacagagtcattcccatcaactaccatacac
accactcctttcttaactccaaccatagccttctcccctgttcccaccgaacctgctgcc
aacaccacggttggtatgacagaattaactccccaagactctactttcacaactgaacaa
actctcaatgtaactttagtttcaactgaacccgcatctaacatcactttgggccctccg
gccgtgttgggtgatcagggggtgactgaagatcgagttgacatcacagccacagtgacc
ttgattccaactagcagtgaagctaatacagactctgctgtacccaaaaccaaagctgcc
accactacttctcatcaagccacaactggaactactgccgccactgaagcctcaactagt
gtcaacatcaagtccaccaccagtggaaggaccacaacaacagcaccaacgtcaagaccg
tacctctgcaaccttgacaggcctgcttatttagtcaaaattggttttccttcgggggcc
actgttggatatgccaaatctcaagtgagagacatactgaaaggggaatacaacaaatct
atggagctgcaggttgtggatcccccaccaaagtttgtgtttcgggtggtgtctggtcca
gtggtgtacacagccatatctgtcatcaatgctctgcgaaggtctggacgccgcttcctg
tctctgtctcccaactggataacaccagaccgtaaatatcaagtccacacagtgctgcag
tttgttcccggtcacatagacgtgcggttctgcaactttagtgagagcatggagaaaggt
ttgaccatggcctttgcagaagtgcgtaggcgctcaaaggagtcaaccaacttcacagtg
cagattgtgaacatcaccatggctgctcctaaatatcaggaacaaagactggtgagacaa
ccagtggacttgaccttcacagtgcacggttcaaggggttatctggtggggtcagaggtc
agcaatgctctgatgaagctcacaatggtggaattcagctattacatgggctttcctgta
ctgcagattgctgagcctttccattatccagagttgaataccagccagttgcttcgctcc
tcctgggttagaacagtgctcctgggtgtgctggaccagaaagtgggtgagaggaccttc
caggccaacatggagcgccgggtggccatgttactcggggaggcaactggattaatcaga
cgtgttaggagagctacccttataggcaacagcagtgttcaggttgtaagtgcgagccgg
ctggagggtgcggaccatcccttggaggtagtgtatttcgtggaggatcctagtggtcag
aggatgcctgcagctcaaacagccaacctactcaacagcctggacgttcaaagggctgcc
atcgtcttgggatatcgtgtccagggcattttggcacagcctgtagagaaggtggcgtca
gcaccttctgacgctgagaacaccaacacgtggatcgtcattggggttgtgattccactc
atcgttgtcatcatcattatttccatcctgtactggaaactgtgtcgaacagacaagctg
gagttccagccagacgccatgacctccatccagcagagacagaagcctactacctccttc
agagaatcaaggacctctcttcagcagactcttcctcccactaaaaagaatatagatttt
agtgaggaggaagagggggagtatgaggaagaagaagaggagtatgaagaagaggaggag
gaggaggaggaggttaaaagagggaagacaccagtagctcttccaaagagcaaagggaca
atgagcagtgaggaggaagaagaagaggaggaagaggaagaagaagaagaggaagaagaa
ttagaggaggaggaggaggaggaggaagaagacaaagatgaggaaaaggagaaatttcaa
aagaaaggagttgaacaagaagaacaaaaaagacaagagagcaaagcaatgataatgaaa
actggggtgacgaagaaagaagacaaaatgaaagtatcaactaaagggaggagagccaag
gacgagctgcaggctcccagtgtgaaaggatttgactttgccaagctgcaccttggccag
cacagtaaggatgatgtcatggtgatccaggagtctgtcccgtcggggccgggccctggg
cccctccccctgtcccttaaagatggcctcagtccatctgagaacggggagatccccaca
cccatgtccaaaacctccaccaaggcgtcccgcagtggtcgaagacgagaaaggatctcg
ccgtctgacggtgactctgtggtaagtgaccgttccagcgagcgtgaatcaactgaggag
aactcgagagcccacgccacgcccaacgacagcaagcagacccgtaaggtccccatcaat
gttttaaatggcaagaatagaattggtcctcctcctatgaatggtacaaatgagcagctg
tcctcagcctccatctttgaacatgttgatcggatgtctcgtgccacagatgcaagcagg
agactccccaataaaatccagcttatcgccatgcagcccatgcctgtcccaccgctgtac
agcccacccatcaacggaaaactgtctgacaccaaccaaatcaacaaagagatccaggta
gcattgaggcacaagtcagagatcgagcaccaccgtaacaagatacgtctgcgtgccaag
aggaagggccactacgacttccccactatggatgacatgacgaatggccccggagatgcg
aaggacccggatcgcatctatcagaaagcacagttacagatcgataagatcctggacccg
gatgcccagatgccccccatctacatggaatccaagaaaagcggtcgtggtaggcgctct
cccaaacagagaatgaagggccagctaaatggaggcctaatggaggcagacaaagaccac
ctcatcaccgaagacactgatgctgtttacagaaagtgtcccggagtcaacaacgtggcc
tacgtatcggaccctgaccaaggtccaggatcccctcacgggagcccctcccccaccgat
gacgtcttcatgggtcccgcttcctctcctccaggccatgcccctcccccacccccctac
atgcctccacagccgtccattgaggaggcgcggcagcagatgcactccctgctggacgat
gcctttgccctagtgtcgcccacctctcagggcagcacagcagggatcactctccccggg
gtcaacaccaacccgcctgtctccagccctccaggccgtggctccagaccctggggtccc
tcttaccagggtctcggtcctttccctggtaggttcactgatctgaacttgtcccctcct
cctgtccaaggcctgacgccaaggcagggccttggctcgagctatctgccaccaggagaa
actgcagggcagagtgagcagttccagccagacagcctgtactccagcaggggcctctac
gctgatgagctgccctcatctgccagaccgcgaccagtagggggaactacaggcgcccag
ctccatcatcttacacaggtgggattgtccagccggatgaatggttacccagcaggggtc
agggcggctccagggcagaacggaggcatcggctggaaccactaccatggtgaccacttc
tccaggacggagcctgaaaaagatgcattcctggactgtcctgactacacgtcctcctct
gtcttccagacgcccagaagtggtatcagggagccttctgcgccccctgtccacctggac
accacaggatatctgtcagccccacctcccctggatacgtctcctcctacccactcctct
gcttccctgatcaaggccatcagggaggagctgttgcgactctcccagaaacaggcagct
gtgcccagctaccacagctga
DBGET
integrated database retrieval system
