Anoplopoma fimbria (sablefish): 129113163
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Entry
129113163 CDS
T09102
Symbol
rnft1
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1 isoform X1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129113163 (rnft1)
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129113163 (rnft1)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129113163 (rnft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-rbx1
zf-ANAPC11
Prok-RING_4
zf-RING_6
zf-C3HC4_4
zf-RING_16
Sina_RING
Motif
Other DBs
NCBI-GeneID:
129113163
NCBI-ProteinID:
XP_054481314
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All DBs
Position
24:24038445..24042568
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AA seq
426 aa
AA seq
DB search
MKLRVQNDRSDSRRALKLRESAAVMQPDASEHGAHTGNGLSLTLQPELTRTPVPGAAAAA
ANPDCNEVRVTMTSKPGESTGGASSRRSRVNSHSHSHSQPHVHNRVPHHSNSEAELDPPD
SDLDSGEPSSSLSELRCLFRWLQKSLPFLVIVCAKLVIQHALGLAVGVGLFTTFLYVNKN
IQTQVFLQDRHSKLQCVWLLLFLISSTLLLYYTFLTETIHYCLIFLSPAIEPLGFWEVPW
AVGITNFIIKFLFMGIKCLILLLPSSLVTYRTQGRWVMLTEELGQVHQAMAPVPLWFRYL
VTYQEVDGTPGLTLGVLLALLYLILKLLGLYGQWTSLLKTMRIFVKGEHTGSAATRSQCS
EAGDVCPICQGEYREPRVLLCQHIFCDECIALWFNREKSCPLCRTVITEKVYKWRDGATS
PHLQIY
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccgggtgcagaatgacaggagtgattccagaagagcactgaaactgagggag
tctgctgctgtaatgcagcctgatgcaagtgagcacggcgctcatacaggaaatggtttg
tccctaactctgcaaccagaacttaccaggacaccggtcccaggtgctgcggctgctgct
gcaaacccagattgcaatgaggtgcgagtaaccatgaccagcaagcctggggagtccact
ggaggagcatcatccaggaggtccagagtcaactcacacagccactcccattctcagcca
cacgtacacaaccgggtgccgcaccactcgaattctgaggctgagcttgacccgcctgac
tccgatctggattctggagaacccagttcctccttgtctgagcttcgctgtctcttccgc
tggcttcaaaagagtcttcctttccttgtcattgtgtgcgccaagctagtcatccaacat
gctcttggtctagcagttggggttggcctcttcacaacttttttatatgtgaataaaaac
attcaaactcaagtctttcttcaggatcgtcactcgaagctgcagtgtgtttggctgcta
ctgttcctgatctcttccaccctcctgctttactacacctttctcactgagacaattcac
tattgcctcatcttcctcagcccagccattgagccgctgggtttctgggaggttccctgg
gctgtcggcatcacaaacttcataataaagtttctctttatggggattaagtgccttatt
ctgctgctgccatcctcactggtgacatacagaacccaggggcggtgggtgatgctgact
gaggagctgggtcaggtccaccaggccatggctccagtcccactttggttccgctacctg
gtcacgtaccaggaggttgatggcacccctggactcacactgggggtcctgctggctttg
ctctacctcatactgaagcttttaggattgtacggacaatggacgtctttactgaaaacc
atgaggatatttgtaaagggcgagcatacaggctcagcagccactaggagtcagtgcagc
gaggctggagacgtctgtcccatctgtcagggagagtacagggagcctcgggttctactc
tgtcagcacatattctgtgacgaatgcatcgctctgtggtttaaccgggagaagagctgc
cctctctgccgcaccgtgatcacagagaaggtttacaagtggagggatggagccacatct
ccacacctgcagatttattga
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